RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 TMEM78Q5T7P6 136 aa11.01□□□□□ -0.65
CHRNA3-201ENST00000326828 RPL39LQ96EH5 51 aaKnown RBP11.01□□□□□ -0.65
CHRNA3-201ENST00000326828 LINC00527Q9UJ94 153 aa11.01□□□□□ -0.65
CHRNA3-201ENST00000326828 GRNP28799 593 aaKnown RBP11.01□□□□□ -0.65
CHRNA3-201ENST00000326828 FAM90A27PA6NNH2 459 aa11□□□□□ -0.65
CHRNA3-201ENST00000326828 ZNF815PA8K554 130 aa11□□□□□ -0.65
CHRNA3-201ENST00000326828 C14orf178Q8N769 122 aaPredicted RBP11□□□□□ -0.65
CHRNA3-201ENST00000326828 S100A4P26447 101 aaKnown RBP11□□□□□ -0.65
CHRNA3-201ENST00000326828 SRSF1Q07955 248 aaKnown RBP eCLIP11□□□□□ -0.65
CHRNA3-201ENST00000326828 ZNF672Q499Z4 452 aaPredicted RBP10.99□□□□□ -0.65
CHRNA3-201ENST00000326828 SMPXQ9UHP9 88 aa10.99□□□□□ -0.65
CHRNA3-201ENST00000326828 MYMXA0A1B0GTQ4 84 aa10.99□□□□□ -0.65
CHRNA3-201ENST00000326828 LY6LH3BQJ8 138 aa10.99□□□□□ -0.65
CHRNA3-201ENST00000326828 CD3EP07766 207 aa10.99□□□□□ -0.65
CHRNA3-201ENST00000326828 PLEKHB2Q96CS7 222 aa10.99□□□□□ -0.65
CHRNA3-201ENST00000326828 IGLV2-18A0A075B6J9 118 aa10.99□□□□□ -0.65
CHRNA3-201ENST00000326828 G3V318 75 aa10.99□□□□□ -0.65
CHRNA3-201ENST00000326828 H7C2G1 150 aa10.99□□□□□ -0.65
CHRNA3-201ENST00000326828 SLC25A16P16260 332 aa10.99□□□□□ -0.65
CHRNA3-201ENST00000326828 ARL3P36405 182 aa10.99□□□□□ -0.65
CHRNA3-201ENST00000326828 NRACQ8N912 160 aa10.99□□□□□ -0.65
CHRNA3-201ENST00000326828 PRADC1Q9BSG0 188 aa10.99□□□□□ -0.65
CHRNA3-201ENST00000326828 RPL11P62913 178 aaKnown RBP10.98□□□□□ -0.65
CHRNA3-201ENST00000326828 SORL1Q92673 2214 aa10.98□□□□□ -0.65
CHRNA3-201ENST00000326828 HRNRQ86YZ3 2850 aaPredicted RBP10.98□□□□□ -0.65
CHRNA3-201ENST00000326828 SPINK8P0C7L1 97 aa10.98□□□□□ -0.65
CHRNA3-201ENST00000326828 H7C1H1 209 aa10.97□□□□□ -0.65
CHRNA3-201ENST00000326828 MT-ATP8P03928 68 aa10.97□□□□□ -0.65
CHRNA3-201ENST00000326828 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.97□□□□□ -0.65
CHRNA3-201ENST00000326828 CUBNO60494 3623 aa10.97□□□□□ -0.65
CHRNA3-201ENST00000326828 F8VRH5 84 aa10.97□□□□□ -0.65
CHRNA3-201ENST00000326828 LGALS1P09382 135 aaKnown RBP10.97□□□□□ -0.65
CHRNA3-201ENST00000326828 PLNP26678 52 aa10.97□□□□□ -0.65
CHRNA3-201ENST00000326828 LINC01559Q495D7 138 aa10.97□□□□□ -0.65
CHRNA3-201ENST00000326828 MORN3Q6PF18 240 aaPredicted RBP10.97□□□□□ -0.65
CHRNA3-201ENST00000326828 GEMIN7Q9H840 131 aaKnown RBP10.97□□□□□ -0.65
CHRNA3-201ENST00000326828 SPG11Q96JI7 2443 aa10.97□□□□□ -0.65
CHRNA3-201ENST00000326828 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.97□□□□□ -0.65
CHRNA3-201ENST00000326828 NFE4Q86UQ8 179 aa10.97□□□□□ -0.65
CHRNA3-201ENST00000326828 TRBV7-3A0A075B6L6 115 aa10.96□□□□□ -0.65
CHRNA3-201ENST00000326828 PRR9Q5T870 116 aa10.96□□□□□ -0.66
CHRNA3-201ENST00000326828 PRO0461Q9UI25 63 aa10.96□□□□□ -0.66
CHRNA3-201ENST00000326828 NCOR2Q9Y618 2525 aa10.96□□□□□ -0.66
CHRNA3-201ENST00000326828 SCGB1C2P0DMR2 95 aa10.96□□□□□ -0.66
CHRNA3-201ENST00000326828 CRYBA4P53673 196 aa10.96□□□□□ -0.66
CHRNA3-201ENST00000326828 PIFOQ8TCI5 191 aa10.96□□□□□ -0.66
CHRNA3-201ENST00000326828 C16orf92Q96LL3 132 aa10.96□□□□□ -0.66
CHRNA3-201ENST00000326828 SPATA25Q9BR10 227 aa10.96□□□□□ -0.66
CHRNA3-201ENST00000326828 SMIM2Q9BVW6 85 aa10.96□□□□□ -0.66
CHRNA3-201ENST00000326828 CHD8Q9HCK8 2581 aa10.95□□□□□ -0.66
CHRNA3-201ENST00000326828 IGHV7-4-1A0A0J9YVY3 117 aa10.95□□□□□ -0.66
CHRNA3-201ENST00000326828 B9A039 149 aa10.95□□□□□ -0.66
CHRNA3-201ENST00000326828 BUB3O43684 328 aa10.95□□□□□ -0.66
CHRNA3-201ENST00000326828 FOXI1Q12951 378 aa10.95□□□□□ -0.66
CHRNA3-201ENST00000326828 RNF5Q99942 180 aa10.95□□□□□ -0.66
CHRNA3-201ENST00000326828 SRSF8Q9BRL6 282 aaKnown RBP10.95□□□□□ -0.66
CHRNA3-201ENST00000326828 SCGB2A1O75556 95 aa10.95□□□□□ -0.66
CHRNA3-201ENST00000326828 CNFNQ9BYD5 112 aa10.95□□□□□ -0.66
CHRNA3-201ENST00000326828 PRSS29PA6NIE9 313 aa10.94□□□□□ -0.66
CHRNA3-201ENST00000326828 SMCPP49901 116 aaPredicted RBP10.94□□□□□ -0.66
CHRNA3-201ENST00000326828 C2orf66Q6UXQ4 117 aa10.94□□□□□ -0.66
CHRNA3-201ENST00000326828 IGHV7-81A0A0B4J1V7 117 aa10.94□□□□□ -0.66
CHRNA3-201ENST00000326828 C8orf86Q6ZUL3 223 aa10.94□□□□□ -0.66
CHRNA3-201ENST00000326828 KIR2DL4Q99706 377 aa10.94□□□□□ -0.66
CHRNA3-201ENST00000326828 MSRB2Q9Y3D2 182 aa10.94□□□□□ -0.66
CHRNA3-201ENST00000326828 IGFL3Q6UXB1 125 aa10.94□□□□□ -0.66
CHRNA3-201ENST00000326828 VMO1Q7Z5L0 202 aa10.94□□□□□ -0.66
CHRNA3-201ENST00000326828 DLX4Q92988 240 aaPredicted RBP10.94□□□□□ -0.66
CHRNA3-201ENST00000326828 F6UB75 175 aa10.93□□□□□ -0.66
CHRNA3-201ENST00000326828 SUMO2P61956 95 aaKnown RBP10.93□□□□□ -0.66
CHRNA3-201ENST00000326828 FHL3Q13643 280 aa10.93□□□□□ -0.66
CHRNA3-201ENST00000326828 PHLDA3Q9Y5J5 127 aa10.93□□□□□ -0.66
CHRNA3-201ENST00000326828 IGHV3-64A0A075B6Q5 118 aa10.93□□□□□ -0.66
CHRNA3-201ENST00000326828 ATP6V0E1O15342 81 aa10.93□□□□□ -0.66
CHRNA3-201ENST00000326828 ANXA2RQ3ZCQ2 193 aa10.93□□□□□ -0.66
CHRNA3-201ENST00000326828 NPBQ8NG41 125 aa10.93□□□□□ -0.66
CHRNA3-201ENST00000326828 RAX2Q96IS3 184 aa10.93□□□□□ -0.66
CHRNA3-201ENST00000326828 SCGB1A1P11684 91 aa10.92□□□□□ -0.66
CHRNA3-201ENST00000326828 DUSP14O95147 198 aaKnown RBP10.92□□□□□ -0.66
CHRNA3-201ENST00000326828 TSPAN13O95857 204 aa10.92□□□□□ -0.66
CHRNA3-201ENST00000326828 XGP55808 180 aa10.92□□□□□ -0.66
CHRNA3-201ENST00000326828 TMEM170BQ5T4T1 132 aa10.92□□□□□ -0.66
CHRNA3-201ENST00000326828 C1QTNF4Q9BXJ3 329 aa10.92□□□□□ -0.66
CHRNA3-201ENST00000326828 PTPRQQ9UMZ3 2332 aa10.92□□□□□ -0.66
CHRNA3-201ENST00000326828 IGHV3OR16-10A0A075B7F0 116 aa10.92□□□□□ -0.66
CHRNA3-201ENST00000326828 TAL2Q16559 108 aa10.92□□□□□ -0.66
CHRNA3-201ENST00000326828 COX8CQ7Z4L0 72 aa10.92□□□□□ -0.66
CHRNA3-201ENST00000326828 BAALCQ8WXS3 180 aa10.92□□□□□ -0.66
CHRNA3-201ENST00000326828 SPTBN4Q9H254 2564 aa10.91□□□□□ -0.66
CHRNA3-201ENST00000326828 TRAV8-2A0A0B4J237 113 aa10.91□□□□□ -0.66
CHRNA3-201ENST00000326828 GNRH2O43555 120 aa10.91□□□□□ -0.66
CHRNA3-201ENST00000326828 SRD5A1P18405 259 aa10.91□□□□□ -0.66
CHRNA3-201ENST00000326828 GATA3P23771 443 aa10.91□□□□□ -0.66
CHRNA3-201ENST00000326828 PSMG4Q5JS54 123 aa10.91□□□□□ -0.66
CHRNA3-201ENST00000326828 RASL10AQ92737 203 aa10.91□□□□□ -0.66
CHRNA3-201ENST00000326828 MRAP2Q96G30 205 aa10.91□□□□□ -0.66
CHRNA3-201ENST00000326828 RNASE4P34096 147 aaKnown RBP10.91□□□□□ -0.66
CHRNA3-201ENST00000326828 PIP4P1Q86T03 277 aa10.91□□□□□ -0.66
CHRNA3-201ENST00000326828 TMEM219Q86XT9 240 aa10.91□□□□□ -0.66
CHRNA3-201ENST00000326828 F5H697 171 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms