RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SIVA1O15304 175 aa16.9■□□□□ 0.3
PNKP-201ENST00000322344 CD5LO43866 347 aa16.9■□□□□ 0.3
PNKP-201ENST00000322344 S100A4P26447 101 aaKnown RBP16.9■□□□□ 0.3
PNKP-201ENST00000322344 UBE2V1Q13404 147 aa16.9■□□□□ 0.3
PNKP-201ENST00000322344 Q6ZVH6 145 aa16.9■□□□□ 0.3
PNKP-201ENST00000322344 ZMAT4Q9H898 229 aa16.9■□□□□ 0.3
PNKP-201ENST00000322344 DKK2Q9UBU2 259 aa16.9■□□□□ 0.3
PNKP-201ENST00000322344 TAX1BP3O14907 124 aa16.89■□□□□ 0.29
PNKP-201ENST00000322344 ID1P41134 155 aa16.89■□□□□ 0.29
PNKP-201ENST00000322344 PTTG1IPP53801 180 aa16.89■□□□□ 0.29
PNKP-201ENST00000322344 PKD1L2Q7Z442 2459 aa16.89■□□□□ 0.29
PNKP-201ENST00000322344 PRSS1P07477 247 aa16.89■□□□□ 0.29
PNKP-201ENST00000322344 PSMB8P28062 276 aa16.89■□□□□ 0.29
PNKP-201ENST00000322344 ODF1Q14990 250 aa16.89■□□□□ 0.29
PNKP-201ENST00000322344 TRAV26-2A0A0B4J265 109 aa16.88■□□□□ 0.29
PNKP-201ENST00000322344 SRSF1Q07955 248 aaKnown RBP eCLIP16.88■□□□□ 0.29
PNKP-201ENST00000322344 DEFB112Q30KQ8 113 aa16.88■□□□□ 0.29
PNKP-201ENST00000322344 ANXA2RQ3ZCQ2 193 aa16.88■□□□□ 0.29
PNKP-201ENST00000322344 SMIM17P0DL12 118 aa16.87■□□□□ 0.29
PNKP-201ENST00000322344 RNASE4P34096 147 aaKnown RBP16.87■□□□□ 0.29
PNKP-201ENST00000322344 SEC11AP67812 179 aa16.87■□□□□ 0.29
PNKP-201ENST00000322344 TMEM97Q5BJF2 176 aa16.87■□□□□ 0.29
PNKP-201ENST00000322344 DPH3P1Q9H4G8 78 aa16.87■□□□□ 0.29
PNKP-201ENST00000322344 PHLDA3Q9Y5J5 127 aa16.87■□□□□ 0.29
PNKP-201ENST00000322344 F6UB75 175 aa16.86■□□□□ 0.29
PNKP-201ENST00000322344 IGHV4-59P01825 116 aa16.86■□□□□ 0.29
PNKP-201ENST00000322344 DEFB1P60022 68 aa16.86■□□□□ 0.29
PNKP-201ENST00000322344 MYOZ3Q8TDC0 251 aa16.86■□□□□ 0.29
PNKP-201ENST00000322344 IGKV3-7A0A075B6H7 116 aa16.86■□□□□ 0.29
PNKP-201ENST00000322344 A1L4Q6 167 aa16.86■□□□□ 0.29
PNKP-201ENST00000322344 M0R381 172 aa16.86■□□□□ 0.29
PNKP-201ENST00000322344 CCL25O15444 150 aa16.86■□□□□ 0.29
PNKP-201ENST00000322344 NRGNQ92686 78 aa16.85■□□□□ 0.29
PNKP-201ENST00000322344 C20orf78Q9BR46 151 aa16.85■□□□□ 0.29
PNKP-201ENST00000322344 SMIM2Q9BVW6 85 aa16.85■□□□□ 0.29
PNKP-201ENST00000322344 A0A096LNT2 108 aa16.84■□□□□ 0.29
PNKP-201ENST00000322344 IGKCP01834 107 aa16.84■□□□□ 0.29
PNKP-201ENST00000322344 FOSL1P15407 271 aa16.84■□□□□ 0.29
PNKP-201ENST00000322344 KIR3DS1Q14943 382 aa16.84■□□□□ 0.29
PNKP-201ENST00000322344 TMEM95Q3KNT9 176 aa16.84■□□□□ 0.29
PNKP-201ENST00000322344 FOXC2Q99958 501 aa16.84■□□□□ 0.29
PNKP-201ENST00000322344 K7EMI3 77 aa16.84■□□□□ 0.29
PNKP-201ENST00000322344 KLLNB2CW77 178 aa16.83■□□□□ 0.28
PNKP-201ENST00000322344 DPM2O94777 84 aa16.83■□□□□ 0.28
PNKP-201ENST00000322344 NMUP48645 174 aa16.83■□□□□ 0.28
PNKP-201ENST00000322344 HSD52Q0P140 79 aa16.83■□□□□ 0.28
PNKP-201ENST00000322344 DCANP1Q8TF63 244 aa16.83■□□□□ 0.28
PNKP-201ENST00000322344 VAMP3Q15836 100 aa16.82■□□□□ 0.28
PNKP-201ENST00000322344 ORMDL2Q53FV1 153 aa16.82■□□□□ 0.28
PNKP-201ENST00000322344 PPP1R17O96001 155 aa16.82■□□□□ 0.28
PNKP-201ENST00000322344 AP1S3Q96PC3 154 aa16.82■□□□□ 0.28
PNKP-201ENST00000322344 HHLA3Q9XRX5 114 aa16.82■□□□□ 0.28
PNKP-201ENST00000322344 SVEP1Q4LDE5 3571 aa16.81■□□□□ 0.28
PNKP-201ENST00000322344 DOPEY1Q5JWR5 2465 aa16.81■□□□□ 0.28
PNKP-201ENST00000322344 NXPH4O95158 308 aa16.81■□□□□ 0.28
PNKP-201ENST00000322344 SUMO2P61956 95 aaKnown RBP16.81■□□□□ 0.28
PNKP-201ENST00000322344 CACNA1AO00555 2505 aa16.81■□□□□ 0.28
PNKP-201ENST00000322344 RNASE3P12724 160 aaKnown RBP16.8■□□□□ 0.28
PNKP-201ENST00000322344 COX6B1P14854 86 aa16.8■□□□□ 0.28
PNKP-201ENST00000322344 GNRH2O43555 120 aa16.8■□□□□ 0.28
PNKP-201ENST00000322344 SRD5A1P18405 259 aa16.8■□□□□ 0.28
PNKP-201ENST00000322344 C14orf178Q8N769 122 aaPredicted RBP16.8■□□□□ 0.28
PNKP-201ENST00000322344 RASL10AQ92737 203 aa16.8■□□□□ 0.28
PNKP-201ENST00000322344 A6NDN8 102 aa16.79■□□□□ 0.28
PNKP-201ENST00000322344 TGFAP01135 160 aa16.79■□□□□ 0.28
PNKP-201ENST00000322344 PCP2Q8IVA1 136 aa16.79■□□□□ 0.28
PNKP-201ENST00000322344 ODF3Q96PU9 254 aa16.79■□□□□ 0.28
PNKP-201ENST00000322344 HLA-DRB4P13762 266 aa16.79■□□□□ 0.28
PNKP-201ENST00000322344 EDN2P20800 178 aa16.79■□□□□ 0.28
PNKP-201ENST00000322344 ADAMTSL5Q6ZMM2 481 aa16.79■□□□□ 0.28
PNKP-201ENST00000322344 POM121L12Q8N7R1 296 aa16.79■□□□□ 0.28
PNKP-201ENST00000322344 HLA-DRB4X5D2U9 266 aa16.79■□□□□ 0.28
PNKP-201ENST00000322344 A0A087WX48 190 aa16.78■□□□□ 0.28
PNKP-201ENST00000322344 C7orf71A4D174 169 aa16.78■□□□□ 0.28
PNKP-201ENST00000322344 CBY3A6NI87 242 aa16.78■□□□□ 0.28
PNKP-201ENST00000322344 TCTAP57738 103 aa16.78■□□□□ 0.28
PNKP-201ENST00000322344 FAM159AQ6UWV7 190 aa16.78■□□□□ 0.28
PNKP-201ENST00000322344 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.77■□□□□ 0.28
PNKP-201ENST00000322344 VPREB3Q9UKI3 123 aa16.77■□□□□ 0.28
PNKP-201ENST00000322344 MGPP08493 103 aa16.77■□□□□ 0.27
PNKP-201ENST00000322344 HIGD1BQ9P298 99 aa16.77■□□□□ 0.27
PNKP-201ENST00000322344 PIEZO1Q92508 2521 aa16.76■□□□□ 0.27
PNKP-201ENST00000322344 TRAV12-1A0A0B4J245 112 aa16.76■□□□□ 0.27
PNKP-201ENST00000322344 OR4C5Q8NGB2 326 aa16.76■□□□□ 0.27
PNKP-201ENST00000322344 SPRY2O43597 315 aa16.75■□□□□ 0.27
PNKP-201ENST00000322344 FSHBP01225 129 aa16.75■□□□□ 0.27
PNKP-201ENST00000322344 ELANEP08246 267 aa16.75■□□□□ 0.27
PNKP-201ENST00000322344 TOMM6Q96B49 74 aa16.75■□□□□ 0.27
PNKP-201ENST00000322344 MRPL35Q9NZE8 188 aaKnown RBP16.75■□□□□ 0.27
PNKP-201ENST00000322344 SPTAN1Q13813 2472 aaKnown RBP16.75■□□□□ 0.27
PNKP-201ENST00000322344 LGALS1P09382 135 aaKnown RBP16.75■□□□□ 0.27
PNKP-201ENST00000322344 PLNP26678 52 aa16.75■□□□□ 0.27
PNKP-201ENST00000322344 SNRPD3P62318 126 aaKnown RBP16.75■□□□□ 0.27
PNKP-201ENST00000322344 ZC2HC1BQ5TFG8 222 aa16.75■□□□□ 0.27
PNKP-201ENST00000322344 C10orf99Q6UWK7 81 aa16.75■□□□□ 0.27
PNKP-201ENST00000322344 SELENOKQ9Y6D0 94 aa16.75■□□□□ 0.27
PNKP-201ENST00000322344 H3BRM9 83 aa16.74■□□□□ 0.27
PNKP-201ENST00000322344 LGALS9O00182 355 aa16.74■□□□□ 0.27
PNKP-201ENST00000322344 RPL39LQ96EH5 51 aaKnown RBP16.74■□□□□ 0.27
PNKP-201ENST00000322344 IGKV2D-26A0A0A0MRZ7 120 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms