RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 KCNS1Q96KK3 526 aa13.96□□□□□ -0.17
HIGD1A-201ENST00000321331 LINC00479Q96M42 142 aa13.96□□□□□ -0.17
HIGD1A-201ENST00000321331 C18orf15Q96N68 181 aa13.96□□□□□ -0.17
HIGD1A-201ENST00000321331 C8orf49Q96NF6 230 aa13.96□□□□□ -0.17
HIGD1A-201ENST00000321331 TRAV34A0A0B4J273 112 aa13.96□□□□□ -0.18
HIGD1A-201ENST00000321331 OR5I1Q13606 314 aa13.96□□□□□ -0.18
HIGD1A-201ENST00000321331 SDF2L1Q9HCN8 221 aa13.96□□□□□ -0.18
HIGD1A-201ENST00000321331 MDFICQ9P1T7 246 aa13.96□□□□□ -0.18
HIGD1A-201ENST00000321331 KMT2AQ03164 3969 aa13.95□□□□□ -0.18
HIGD1A-201ENST00000321331 PAGE4O60829 102 aa13.95□□□□□ -0.18
HIGD1A-201ENST00000321331 SPXQ9BT56 116 aa13.95□□□□□ -0.18
HIGD1A-201ENST00000321331 VPS13DQ5THJ4 4388 aa13.94□□□□□ -0.18
HIGD1A-201ENST00000321331 TEX46H3BTG2 121 aa13.94□□□□□ -0.18
HIGD1A-201ENST00000321331 PFN1P07737 140 aaKnown RBP13.94□□□□□ -0.18
HIGD1A-201ENST00000321331 UBE2G1P62253 170 aa13.94□□□□□ -0.18
HIGD1A-201ENST00000321331 UBE2DNLQ8IWF7 75 aa13.94□□□□□ -0.18
HIGD1A-201ENST00000321331 C9orf62Q8N4C0 152 aa13.94□□□□□ -0.18
HIGD1A-201ENST00000321331 MRPL16Q9NX20 251 aaKnown RBP13.94□□□□□ -0.18
HIGD1A-201ENST00000321331 SULT1A2P50226 295 aa13.93□□□□□ -0.18
HIGD1A-201ENST00000321331 ZNF80P51504 273 aaPredicted RBP13.93□□□□□ -0.18
HIGD1A-201ENST00000321331 Q86TA4 180 aa13.93□□□□□ -0.18
HIGD1A-201ENST00000321331 POM121L12Q8N7R1 296 aa13.93□□□□□ -0.18
HIGD1A-201ENST00000321331 FMC1Q96HJ9 113 aa13.93□□□□□ -0.18
HIGD1A-201ENST00000321331 GNRH2O43555 120 aa13.92□□□□□ -0.18
HIGD1A-201ENST00000321331 NUDT3O95989 172 aa13.92□□□□□ -0.18
HIGD1A-201ENST00000321331 TYMSP04818 313 aa13.92□□□□□ -0.18
HIGD1A-201ENST00000321331 HOXA5P20719 270 aa13.92□□□□□ -0.18
HIGD1A-201ENST00000321331 ZFP30Q9Y2G7 519 aa13.92□□□□□ -0.18
HIGD1A-201ENST00000321331 TRAV26-1A0A087WT03 109 aa13.91□□□□□ -0.18
HIGD1A-201ENST00000321331 IGHV3-16A0A0C4DH30 117 aa13.91□□□□□ -0.18
HIGD1A-201ENST00000321331 AKR1C3P42330 323 aa13.91□□□□□ -0.18
HIGD1A-201ENST00000321331 TRAV1-1A0A0B4J248 108 aa13.9□□□□□ -0.18
HIGD1A-201ENST00000321331 RNF212Q495C1 297 aa13.9□□□□□ -0.18
HIGD1A-201ENST00000321331 MANBALQ9NQG1 85 aa13.9□□□□□ -0.18
HIGD1A-201ENST00000321331 TRBV6-1A0A0K0K1D8 114 aa13.89□□□□□ -0.19
HIGD1A-201ENST00000321331 FABP5P3A8MUU1 101 aa13.89□□□□□ -0.19
HIGD1A-201ENST00000321331 RASL10AQ92737 203 aa13.89□□□□□ -0.19
HIGD1A-201ENST00000321331 C11orf21Q9P2W6 132 aa13.89□□□□□ -0.19
HIGD1A-201ENST00000321331 A0A0J9YY99 117 aa13.88□□□□□ -0.19
HIGD1A-201ENST00000321331 H3BNG1 76 aa13.88□□□□□ -0.19
HIGD1A-201ENST00000321331 M0R2P5 195 aa13.88□□□□□ -0.19
HIGD1A-201ENST00000321331 S100A9P06702 114 aaKnown RBP13.88□□□□□ -0.19
HIGD1A-201ENST00000321331 GNG13Q9P2W3 67 aa13.88□□□□□ -0.19
HIGD1A-201ENST00000321331 COX8CQ7Z4L0 72 aa13.87□□□□□ -0.19
HIGD1A-201ENST00000321331 MUC4Q99102 2169 aa13.87□□□□□ -0.19
HIGD1A-201ENST00000321331 DNAH6Q9C0G6 4158 aa13.86□□□□□ -0.19
HIGD1A-201ENST00000321331 SCO2A0A1W2PP80 73 aa13.86□□□□□ -0.19
HIGD1A-201ENST00000321331 IGHV3-53P01767 116 aa13.86□□□□□ -0.19
HIGD1A-201ENST00000321331 CCL20P78556 96 aa13.86□□□□□ -0.19
HIGD1A-201ENST00000321331 SLAQ13239 276 aa13.86□□□□□ -0.19
HIGD1A-201ENST00000321331 LTAP01374 205 aa13.85□□□□□ -0.19
HIGD1A-201ENST00000321331 CCL18P55774 89 aa13.85□□□□□ -0.19
HIGD1A-201ENST00000321331 LCE2DQ5TA82 110 aaPredicted RBP13.85□□□□□ -0.19
HIGD1A-201ENST00000321331 ZC2HC1AQ96GY0 325 aa13.85□□□□□ -0.19
HIGD1A-201ENST00000321331 TXNDC17Q9BRA2 123 aa13.85□□□□□ -0.19
HIGD1A-201ENST00000321331 IFNA1P01562 189 aa13.84□□□□□ -0.19
HIGD1A-201ENST00000321331 FAM3BP58499 235 aaPredicted RBP13.84□□□□□ -0.19
HIGD1A-201ENST00000321331 FAM162BQ5T6X4 162 aa13.84□□□□□ -0.19
HIGD1A-201ENST00000321331 IGKV3D-20A0A0C4DH25 116 aa13.83□□□□□ -0.19
HIGD1A-201ENST00000321331 ORM1P02763 201 aa13.83□□□□□ -0.19
HIGD1A-201ENST00000321331 NKX2-5P52952 324 aaPredicted RBP13.83□□□□□ -0.19
HIGD1A-201ENST00000321331 PRO0255Q9UI72 69 aa13.83□□□□□ -0.19
HIGD1A-201ENST00000321331 TRAV4A0A0B4J268 109 aa13.83□□□□□ -0.2
HIGD1A-201ENST00000321331 TRGV4A0A0C4DH28 118 aa13.83□□□□□ -0.2
HIGD1A-201ENST00000321331 SH2D1AO60880 128 aa13.83□□□□□ -0.2
HIGD1A-201ENST00000321331 S100A4P26447 101 aaKnown RBP13.83□□□□□ -0.2
HIGD1A-201ENST00000321331 CRIP1P50238 77 aa13.83□□□□□ -0.2
HIGD1A-201ENST00000321331 FHL2Q14192 279 aa13.83□□□□□ -0.2
HIGD1A-201ENST00000321331 OR4C5Q8NGB2 326 aa13.83□□□□□ -0.2
HIGD1A-201ENST00000321331 VSIG2Q96IQ7 327 aa13.83□□□□□ -0.2
HIGD1A-201ENST00000321331 ZNF479Q96JC4 524 aa13.83□□□□□ -0.2
HIGD1A-201ENST00000321331 C9orf85Q96MD7 179 aa13.83□□□□□ -0.2
HIGD1A-201ENST00000321331 HHLA3Q9XRX5 114 aa13.83□□□□□ -0.2
HIGD1A-201ENST00000321331 B4DEV8 164 aa13.82□□□□□ -0.2
HIGD1A-201ENST00000321331 C9JCJ5 164 aa13.82□□□□□ -0.2
HIGD1A-201ENST00000321331 PAX4O43316 350 aa13.82□□□□□ -0.2
HIGD1A-201ENST00000321331 SFTA3P0C7M3 94 aa13.82□□□□□ -0.2
HIGD1A-201ENST00000321331 ZNF876PQ49A33 203 aa13.82□□□□□ -0.2
HIGD1A-201ENST00000321331 RNASE3P12724 160 aaKnown RBP13.81□□□□□ -0.2
HIGD1A-201ENST00000321331 ASIPP42127 132 aa13.81□□□□□ -0.2
HIGD1A-201ENST00000321331 CRYBA4P53673 196 aa13.81□□□□□ -0.2
HIGD1A-201ENST00000321331 ZNF674Q2M3X9 581 aa13.81□□□□□ -0.2
HIGD1A-201ENST00000321331 ALKAL2Q6UX46 152 aa13.81□□□□□ -0.2
HIGD1A-201ENST00000321331 BAGE2Q86Y30 109 aa13.81□□□□□ -0.2
HIGD1A-201ENST00000321331 NHLRC2Q8NBF2 726 aa13.81□□□□□ -0.2
HIGD1A-201ENST00000321331 C11orf52Q96A22 123 aa13.8□□□□□ -0.2
HIGD1A-201ENST00000321331 A0A096LPF7 62 aa13.79□□□□□ -0.2
HIGD1A-201ENST00000321331 KRBOX1C9JBD0 128 aa13.79□□□□□ -0.2
HIGD1A-201ENST00000321331 M0R036 132 aa13.79□□□□□ -0.2
HIGD1A-201ENST00000321331 PDE6DO43924 150 aa13.79□□□□□ -0.2
HIGD1A-201ENST00000321331 BCL2P10415 239 aa13.79□□□□□ -0.2
HIGD1A-201ENST00000321331 TAGLN2P37802 199 aaKnown RBP13.79□□□□□ -0.2
HIGD1A-201ENST00000321331 RPL35P42766 123 aaKnown RBP13.79□□□□□ -0.2
HIGD1A-201ENST00000321331 BLOC1S1P78537 153 aa13.79□□□□□ -0.2
HIGD1A-201ENST00000321331 MEF2BQ02080 365 aaPredicted RBP13.79□□□□□ -0.2
HIGD1A-201ENST00000321331 PTH2Q96A98 100 aa13.79□□□□□ -0.2
HIGD1A-201ENST00000321331 LINC00588Q9Y4M8 146 aa13.79□□□□□ -0.2
HIGD1A-201ENST00000321331 ICOSQ9Y6W8 199 aa13.79□□□□□ -0.2
HIGD1A-201ENST00000321331 NACAE9PAV3 2078 aa13.78□□□□□ -0.2
HIGD1A-201ENST00000321331 IGLV2-18A0A075B6J9 118 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms