RNA–Protein interactions for RNA: ENST00000306901.8

CHRNA7-201, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRNA7, Length 6,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-201ENST00000306901 CASP8AP2Q9UKL3 1982 aa11.25□□□□□ -0.61
CHRNA7-201ENST00000306901 IGHV1-69DA0A0B4J2H0 117 aa11.24□□□□□ -0.61
CHRNA7-201ENST00000306901 IGHV1-69P01742 117 aa11.24□□□□□ -0.61
CHRNA7-201ENST00000306901 LMO1P25800 156 aa11.24□□□□□ -0.61
CHRNA7-201ENST00000306901 K7EM74 188 aa11.24□□□□□ -0.61
CHRNA7-201ENST00000306901 FOXI1Q12951 378 aa11.24□□□□□ -0.61
CHRNA7-201ENST00000306901 NRXN2Q9P2S2 1712 aa11.24□□□□□ -0.61
CHRNA7-201ENST00000306901 XIRP1Q702N8 1843 aaKnown RBP11.24□□□□□ -0.61
CHRNA7-201ENST00000306901 ACYP1P07311 99 aa11.24□□□□□ -0.61
CHRNA7-201ENST00000306901 TNS1Q9HBL0 1735 aaKnown RBP11.24□□□□□ -0.61
CHRNA7-201ENST00000306901 IGHV7-4-1A0A0J9YVY3 117 aa11.23□□□□□ -0.61
CHRNA7-201ENST00000306901 E9PQ18 207 aa11.23□□□□□ -0.61
CHRNA7-201ENST00000306901 ATOX1O00244 68 aa11.23□□□□□ -0.61
CHRNA7-201ENST00000306901 MSMBP08118 114 aa11.23□□□□□ -0.61
CHRNA7-201ENST00000306901 LOXP28300 417 aaPredicted RBP11.23□□□□□ -0.61
CHRNA7-201ENST00000306901 TMEM61Q8N0U2 210 aa11.23□□□□□ -0.61
CHRNA7-201ENST00000306901 ZNF491Q8N8L2 437 aa11.23□□□□□ -0.61
CHRNA7-201ENST00000306901 G3V4G9 280 aa11.23□□□□□ -0.61
CHRNA7-201ENST00000306901 AGPAT4-IT1Q9H0P7 198 aa11.23□□□□□ -0.61
CHRNA7-201ENST00000306901 APRG1Q8IVJ8 170 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 MPLKIPQ8TAP9 179 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 C8orf31Q8N9H6 132 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 RPL39P62891 51 aaKnown RBP11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 LINC01620Q4KN68 170 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 MYO7BQ6PIF6 2116 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 TRPM7Q96QT4 1865 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 BUB3O43684 328 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 CRYGBP07316 175 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 PRR20EP86478 221 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 PRR20CP86479 221 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 PRR20DP86480 221 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 PRR20BP86481 221 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 PRR20AP86496 221 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 SPTSSBQ8NFR3 76 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 SND1-IT1Q9HBX3 110 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 ANK1P16157 1881 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 A0A0J9YXV3 536 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 RNF114Q9Y508 228 aa11.22□□□□□ -0.61
CHRNA7-201ENST00000306901 SDK2Q58EX2 2172 aa11.21□□□□□ -0.61
CHRNA7-201ENST00000306901 MED12Q93074 2177 aa11.21□□□□□ -0.61
CHRNA7-201ENST00000306901 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
CHRNA7-201ENST00000306901 RNF183Q96D59 192 aa11.21□□□□□ -0.61
CHRNA7-201ENST00000306901 TIMM17AQ99595 171 aa11.21□□□□□ -0.62
CHRNA7-201ENST00000306901 SCN10AQ9Y5Y9 1956 aa11.2□□□□□ -0.62
CHRNA7-201ENST00000306901 DEFB136Q30KP8 78 aa11.2□□□□□ -0.62
CHRNA7-201ENST00000306901 TEN1Q86WV5 123 aa11.2□□□□□ -0.62
CHRNA7-201ENST00000306901 VSIG2Q96IQ7 327 aa11.2□□□□□ -0.62
CHRNA7-201ENST00000306901 AHCTF1Q8WYP5 2266 aa11.2□□□□□ -0.62
CHRNA7-201ENST00000306901 FRMD6-AS1P0C7T7 363 aa11.2□□□□□ -0.62
CHRNA7-201ENST00000306901 PI4KAP42356 2102 aa11.2□□□□□ -0.62
CHRNA7-201ENST00000306901 IGLV3-9A0A075B6K5 115 aa11.2□□□□□ -0.62
CHRNA7-201ENST00000306901 A0A0U1RQV1 116 aa11.2□□□□□ -0.62
CHRNA7-201ENST00000306901 RHOHQ15669 191 aa11.2□□□□□ -0.62
CHRNA7-201ENST00000306901 HIST2H2BCQ6DN03 193 aa11.2□□□□□ -0.62
CHRNA7-201ENST00000306901 ESM1Q9NQ30 184 aa11.2□□□□□ -0.62
CHRNA7-201ENST00000306901 LGALS9O00182 355 aa11.19□□□□□ -0.62
CHRNA7-201ENST00000306901 LINC01545Q5VT33 79 aa11.19□□□□□ -0.62
CHRNA7-201ENST00000306901 NPBQ8NG41 125 aa11.19□□□□□ -0.62
CHRNA7-201ENST00000306901 SCN5AQ14524 2016 aa11.19□□□□□ -0.62
CHRNA7-201ENST00000306901 FUSP35637 526 aaKnown RBP eCLIP11.19□□□□□ -0.62
CHRNA7-201ENST00000306901 LYPD6BQ8NI32 183 aa11.19□□□□□ -0.62
CHRNA7-201ENST00000306901 RITA1Q96K30 269 aa11.19□□□□□ -0.62
CHRNA7-201ENST00000306901 Q96MF0 132 aa11.19□□□□□ -0.62
CHRNA7-201ENST00000306901 ETDCA0A1B0GVM5 59 aa11.19□□□□□ -0.62
CHRNA7-201ENST00000306901 IGHV3-30P01768 117 aa11.19□□□□□ -0.62
CHRNA7-201ENST00000306901 IGHV3-33P01772 117 aa11.19□□□□□ -0.62
CHRNA7-201ENST00000306901 IGHV3-30-3P0DP02 117 aa11.19□□□□□ -0.62
CHRNA7-201ENST00000306901 IGHV3-30-5P0DP03 117 aa11.19□□□□□ -0.62
CHRNA7-201ENST00000306901 SPANXCQ9NY87 97 aa11.19□□□□□ -0.62
CHRNA7-201ENST00000306901 NREPQ16612 68 aa11.18□□□□□ -0.62
CHRNA7-201ENST00000306901 DOCK3Q8IZD9 2030 aa11.18□□□□□ -0.62
CHRNA7-201ENST00000306901 Q8TCH9 128 aa11.18□□□□□ -0.62
CHRNA7-201ENST00000306901 HERV-K104P63124 156 aa11.17□□□□□ -0.62
CHRNA7-201ENST00000306901 SIPA1L1O43166 1804 aa11.17□□□□□ -0.62
CHRNA7-201ENST00000306901 RSPO1Q2MKA7 263 aaPredicted RBP11.17□□□□□ -0.62
CHRNA7-201ENST00000306901 SPRNQ5BIV9 151 aa11.17□□□□□ -0.62
CHRNA7-201ENST00000306901 C17orf82Q86X59 251 aaPredicted RBP11.17□□□□□ -0.62
CHRNA7-201ENST00000306901 LECT2O14960 151 aa11.17□□□□□ -0.62
CHRNA7-201ENST00000306901 MP68P56378 58 aa11.17□□□□□ -0.62
CHRNA7-201ENST00000306901 APOC4P55056 127 aa11.17□□□□□ -0.62
CHRNA7-201ENST00000306901 GTSF1Q8WW33 167 aa11.16□□□□□ -0.62
CHRNA7-201ENST00000306901 DOCK6Q96HP0 2047 aa11.16□□□□□ -0.62
CHRNA7-201ENST00000306901 COL4A6Q14031 1691 aa11.16□□□□□ -0.62
CHRNA7-201ENST00000306901 TRAV23DV6A0A075B6W5 121 aa11.16□□□□□ -0.62
CHRNA7-201ENST00000306901 TET1Q8NFU7 2136 aa11.15□□□□□ -0.62
CHRNA7-201ENST00000306901 Q8NFD4 153 aa11.15□□□□□ -0.62
CHRNA7-201ENST00000306901 HEATR1Q9H583 2144 aaKnown RBP11.15□□□□□ -0.62
CHRNA7-201ENST00000306901 PROK2Q9HC23 129 aa11.15□□□□□ -0.62
CHRNA7-201ENST00000306901 DIDO1Q9BTC0 2240 aaKnown RBP11.15□□□□□ -0.62
CHRNA7-201ENST00000306901 THADAQ6YHU6 1953 aa11.15□□□□□ -0.62
CHRNA7-201ENST00000306901 HEATR5AQ86XA9 2040 aa11.15□□□□□ -0.62
CHRNA7-201ENST00000306901 CSRP1P21291 193 aaKnown RBP11.15□□□□□ -0.62
CHRNA7-201ENST00000306901 ARFGEF3Q5TH69 2177 aa11.15□□□□□ -0.62
CHRNA7-201ENST00000306901 IL15RAQ13261 267 aa11.15□□□□□ -0.63
CHRNA7-201ENST00000306901 CAMK2N2Q96S95 79 aa11.15□□□□□ -0.63
CHRNA7-201ENST00000306901 DKK4Q9UBT3 224 aa11.15□□□□□ -0.63
CHRNA7-201ENST00000306901 HOXB4P17483 251 aaPredicted RBP11.14□□□□□ -0.63
CHRNA7-201ENST00000306901 LYPD6Q86Y78 171 aa11.14□□□□□ -0.63
CHRNA7-201ENST00000306901 GREB1LQ9C091 1923 aaPredicted RBP11.14□□□□□ -0.63
CHRNA7-201ENST00000306901 IGHV4OR15-8A0A075B7B6 117 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms