RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 FOXI2Q6ZQN5 318 aa10.41□□□□□ -0.74
CTDP1-202ENST00000299543 CDIP1Q9H305 208 aa10.41□□□□□ -0.74
CTDP1-202ENST00000299543 GATA1P15976 413 aaPredicted RBP10.4□□□□□ -0.74
CTDP1-202ENST00000299543 Q8N9W7 124 aa10.4□□□□□ -0.74
CTDP1-202ENST00000299543 NOTCH3Q9UM47 2321 aa10.4□□□□□ -0.74
CTDP1-202ENST00000299543 MSRB2Q9Y3D2 182 aa10.4□□□□□ -0.74
CTDP1-202ENST00000299543 SAA4P35542 130 aa10.4□□□□□ -0.74
CTDP1-202ENST00000299543 ZC2HC1BQ5TFG8 222 aa10.4□□□□□ -0.74
CTDP1-202ENST00000299543 C1orf122Q6ZSJ8 110 aa10.4□□□□□ -0.74
CTDP1-202ENST00000299543 PHLDA1Q8WV24 401 aaPredicted RBP10.4□□□□□ -0.74
CTDP1-202ENST00000299543 CACNA1AO00555 2505 aa10.4□□□□□ -0.74
CTDP1-202ENST00000299543 TSPAN13O95857 204 aa10.4□□□□□ -0.75
CTDP1-202ENST00000299543 IL17RELQ6ZVW7 336 aa10.4□□□□□ -0.75
CTDP1-202ENST00000299543 FOXC2Q99958 501 aa10.4□□□□□ -0.75
CTDP1-202ENST00000299543 IGLL5B9A064 214 aa10.39□□□□□ -0.75
CTDP1-202ENST00000299543 TRBV6-1A0A0K0K1D8 114 aa10.39□□□□□ -0.75
CTDP1-202ENST00000299543 SPRY2O43597 315 aa10.39□□□□□ -0.75
CTDP1-202ENST00000299543 FBXL19-AS1Q494R0 122 aa10.39□□□□□ -0.75
CTDP1-202ENST00000299543 BPESC1Q9GZL8 116 aa10.39□□□□□ -0.75
CTDP1-202ENST00000299543 USP9YO00507 2555 aaPredicted RBP10.39□□□□□ -0.75
CTDP1-202ENST00000299543 FABP5P3A8MUU1 101 aa10.39□□□□□ -0.75
CTDP1-202ENST00000299543 NFE4Q86UQ8 179 aa10.39□□□□□ -0.75
CTDP1-202ENST00000299543 TEX29Q8N6K0 151 aa10.39□□□□□ -0.75
CTDP1-202ENST00000299543 TRBV25-1A0A075B6N4 114 aa10.38□□□□□ -0.75
CTDP1-202ENST00000299543 KLK15Q9H2R5 256 aa10.38□□□□□ -0.75
CTDP1-202ENST00000299543 ZFHX3Q15911 3703 aa10.38□□□□□ -0.75
CTDP1-202ENST00000299543 CENPEQ02224 2701 aa10.38□□□□□ -0.75
CTDP1-202ENST00000299543 HBDP02042 147 aa10.38□□□□□ -0.75
CTDP1-202ENST00000299543 SCGB1C2P0DMR2 95 aa10.38□□□□□ -0.75
CTDP1-202ENST00000299543 RPL11P62913 178 aaKnown RBP10.38□□□□□ -0.75
CTDP1-202ENST00000299543 Q6ZQT7 251 aa10.38□□□□□ -0.75
CTDP1-202ENST00000299543 SORL1Q92673 2214 aa10.38□□□□□ -0.75
CTDP1-202ENST00000299543 C11orf71Q6IPW1 123 aa10.37□□□□□ -0.75
CTDP1-202ENST00000299543 KIR2DL4Q99706 377 aa10.37□□□□□ -0.75
CTDP1-202ENST00000299543 IGHG4P01861 327 aa10.37□□□□□ -0.75
CTDP1-202ENST00000299543 GAGE5Q13069 117 aa10.37□□□□□ -0.75
CTDP1-202ENST00000299543 GAGE6Q13070 117 aa10.37□□□□□ -0.75
CTDP1-202ENST00000299543 C1QTNF4Q9BXJ3 329 aa10.37□□□□□ -0.75
CTDP1-202ENST00000299543 BRD3OSQ6XYD6 125 aa10.36□□□□□ -0.75
CTDP1-202ENST00000299543 CITED1Q99966 193 aa10.36□□□□□ -0.75
CTDP1-202ENST00000299543 H7C2G1 150 aa10.36□□□□□ -0.75
CTDP1-202ENST00000299543 SIVA1O15304 175 aa10.36□□□□□ -0.75
CTDP1-202ENST00000299543 ARL3P36405 182 aa10.36□□□□□ -0.75
CTDP1-202ENST00000299543 LEPP41159 167 aa10.36□□□□□ -0.75
CTDP1-202ENST00000299543 C12orf74Q32Q52 190 aa10.36□□□□□ -0.75
CTDP1-202ENST00000299543 MINOS1Q5TGZ0 78 aa10.36□□□□□ -0.75
CTDP1-202ENST00000299543 ZNF493Q6ZR52 646 aa10.36□□□□□ -0.75
CTDP1-202ENST00000299543 TM2D2Q9BX73 214 aa10.36□□□□□ -0.75
CTDP1-202ENST00000299543 MINOS1-NBL1R4GNA1 71 aa10.36□□□□□ -0.75
CTDP1-202ENST00000299543 TRAV26-2A0A0B4J265 109 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 TRAV40A0A0B4J280 105 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 TRBV7-9A0A0J9YWB2 115 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 ZFAND6Q6FIF0 208 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 MAP1LC3AQ9H492 121 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 BUB3O43684 328 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 DEFB1P60022 68 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 SRSF9Q13242 221 aaKnown RBP eCLIP10.35□□□□□ -0.75
CTDP1-202ENST00000299543 LY6EQ16553 131 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 TMEM78Q5T7P6 136 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 PRO0461Q9UI25 63 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 FOXI1Q12951 378 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 TTC32Q5I0X7 151 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 Q6ZUT4 128 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 CEND1Q8N111 149 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 Q8N6K4 173 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 AGPAT4-IT1Q9H0P7 198 aa10.35□□□□□ -0.75
CTDP1-202ENST00000299543 FAM208BQ5VWN6 2430 aa10.34□□□□□ -0.75
CTDP1-202ENST00000299543 ACACBO00763 2458 aa10.34□□□□□ -0.75
CTDP1-202ENST00000299543 SMCPP49901 116 aaPredicted RBP10.34□□□□□ -0.75
CTDP1-202ENST00000299543 SCGB1D4Q6XE38 83 aa10.34□□□□□ -0.75
CTDP1-202ENST00000299543 MAPKAPK5-AS1Q8N8E1 139 aa10.34□□□□□ -0.75
CTDP1-202ENST00000299543 ZNF502Q8TBZ5 544 aa10.34□□□□□ -0.75
CTDP1-202ENST00000299543 METTL26Q96S19 204 aa10.34□□□□□ -0.75
CTDP1-202ENST00000299543 SIRPDQ9H106 197 aa10.34□□□□□ -0.75
CTDP1-202ENST00000299543 E9PLD3 99 aa10.34□□□□□ -0.75
CTDP1-202ENST00000299543 LGALS9BQ3B8N2 356 aa10.34□□□□□ -0.75
CTDP1-202ENST00000299543 LGALS9CQ6DKI2 356 aa10.34□□□□□ -0.75
CTDP1-202ENST00000299543 DEFB104AQ8WTQ1 72 aa10.34□□□□□ -0.75
CTDP1-202ENST00000299543 C16orf92Q96LL3 132 aa10.34□□□□□ -0.75
CTDP1-202ENST00000299543 ERG28Q9UKR5 140 aa10.34□□□□□ -0.75
CTDP1-202ENST00000299543 IGHV3-11P01762 117 aa10.34□□□□□ -0.75
CTDP1-202ENST00000299543 FAM110DQ8TAY7 271 aaPredicted RBP10.34□□□□□ -0.75
CTDP1-202ENST00000299543 VPS13CQ709C8 3753 aa10.34□□□□□ -0.75
CTDP1-202ENST00000299543 SPANXN1Q5VSR9 72 aa10.33□□□□□ -0.76
CTDP1-202ENST00000299543 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.33□□□□□ -0.76
CTDP1-202ENST00000299543 HIF1ANQ9NWT6 349 aa10.33□□□□□ -0.76
CTDP1-202ENST00000299543 POLQO75417 2590 aa10.33□□□□□ -0.76
CTDP1-202ENST00000299543 TNFRSF6BO95407 300 aa10.33□□□□□ -0.76
CTDP1-202ENST00000299543 TRGV3P03979 118 aa10.33□□□□□ -0.76
CTDP1-202ENST00000299543 UBE2E1P51965 193 aa10.33□□□□□ -0.76
CTDP1-202ENST00000299543 CCDC140Q96MF4 163 aa10.33□□□□□ -0.76
CTDP1-202ENST00000299543 TMEM8BA6NDV4 472 aa10.32□□□□□ -0.76
CTDP1-202ENST00000299543 OOSP1A8MZH6 123 aa10.32□□□□□ -0.76
CTDP1-202ENST00000299543 CCDC179H3BU77 68 aa10.32□□□□□ -0.76
CTDP1-202ENST00000299543 EEF1AKMT3Q96AZ1 226 aa10.32□□□□□ -0.76
CTDP1-202ENST00000299543 MYO18BQ8IUG5 2567 aa10.32□□□□□ -0.76
CTDP1-202ENST00000299543 DTX2Q86UW9 622 aa10.32□□□□□ -0.76
CTDP1-202ENST00000299543 C11orf21Q9P2W6 132 aa10.32□□□□□ -0.76
CTDP1-202ENST00000299543 TRAV8-2A0A0B4J237 113 aa10.32□□□□□ -0.76
CTDP1-202ENST00000299543 IGKCP01834 107 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms