RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 IGHV3OR16-10A0A075B7F0 116 aa13.65□□□□□ -0.22
TSPAN17-201ENST00000298564 NPFFO15130 113 aa13.65□□□□□ -0.22
TSPAN17-201ENST00000298564 ZNF502Q8TBZ5 544 aa13.65□□□□□ -0.22
TSPAN17-201ENST00000298564 SPAG8Q99932 426 aaPredicted RBP13.65□□□□□ -0.22
TSPAN17-201ENST00000298564 ZMAT4Q9H898 229 aa13.65□□□□□ -0.22
TSPAN17-201ENST00000298564 C12orf74Q32Q52 190 aa13.65□□□□□ -0.22
TSPAN17-201ENST00000298564 SPANXB1Q9NS25 103 aaPredicted RBP13.65□□□□□ -0.22
TSPAN17-201ENST00000298564 CENPVL3A0A0U1RRI6 287 aa13.64□□□□□ -0.23
TSPAN17-201ENST00000298564 CYSLTR1Q9Y271 337 aa13.64□□□□□ -0.23
TSPAN17-201ENST00000298564 FOXI2Q6ZQN5 318 aa13.64□□□□□ -0.23
TSPAN17-201ENST00000298564 IGHV4-39P01824 125 aa13.63□□□□□ -0.23
TSPAN17-201ENST00000298564 NXT2Q9NPJ8 142 aaKnown RBP13.63□□□□□ -0.23
TSPAN17-201ENST00000298564 DEFB1P60022 68 aa13.63□□□□□ -0.23
TSPAN17-201ENST00000298564 CLEC19AQ6UXS0 136 aa13.63□□□□□ -0.23
TSPAN17-201ENST00000298564 TMEM219Q86XT9 240 aa13.63□□□□□ -0.23
TSPAN17-201ENST00000298564 MYOZ3Q8TDC0 251 aa13.63□□□□□ -0.23
TSPAN17-201ENST00000298564 E9PLD3 99 aa13.62□□□□□ -0.23
TSPAN17-201ENST00000298564 CIDEAO60543 219 aa13.62□□□□□ -0.23
TSPAN17-201ENST00000298564 IGF1P05019 195 aa13.62□□□□□ -0.23
TSPAN17-201ENST00000298564 ZFAND3Q9H8U3 227 aa13.62□□□□□ -0.23
TSPAN17-201ENST00000298564 CCDC140Q96MF4 163 aa13.61□□□□□ -0.23
TSPAN17-201ENST00000298564 TM2D2Q9BX73 214 aa13.61□□□□□ -0.23
TSPAN17-201ENST00000298564 AGPAT4-IT1Q9H0P7 198 aa13.61□□□□□ -0.23
TSPAN17-201ENST00000298564 CD300EQ496F6 205 aaPredicted RBP13.61□□□□□ -0.23
TSPAN17-201ENST00000298564 CLUHP3Q96NS8 147 aa13.61□□□□□ -0.23
TSPAN17-201ENST00000298564 HIGD1BQ9P298 99 aa13.61□□□□□ -0.23
TSPAN17-201ENST00000298564 IGLV2-18A0A075B6J9 118 aa13.6□□□□□ -0.23
TSPAN17-201ENST00000298564 EMP1P54849 157 aa13.6□□□□□ -0.23
TSPAN17-201ENST00000298564 Q8N8P6 123 aa13.6□□□□□ -0.23
TSPAN17-201ENST00000298564 BUB3O43684 328 aa13.6□□□□□ -0.23
TSPAN17-201ENST00000298564 TGFAP01135 160 aa13.6□□□□□ -0.23
TSPAN17-201ENST00000298564 SPANXN1Q5VSR9 72 aa13.6□□□□□ -0.23
TSPAN17-201ENST00000298564 C5orf56Q8N8D9 126 aa13.6□□□□□ -0.23
TSPAN17-201ENST00000298564 PSMG3-AS1Q96PY0 264 aa13.6□□□□□ -0.23
TSPAN17-201ENST00000298564 C20orf78Q9BR46 151 aa13.6□□□□□ -0.23
TSPAN17-201ENST00000298564 LINC00527Q9UJ94 153 aa13.6□□□□□ -0.23
TSPAN17-201ENST00000298564 CSMD2Q7Z408 3487 aa13.6□□□□□ -0.23
TSPAN17-201ENST00000298564 H3BVH4 76 aa13.59□□□□□ -0.23
TSPAN17-201ENST00000298564 LAGE3Q14657 143 aa13.59□□□□□ -0.23
TSPAN17-201ENST00000298564 BRD3OSQ6XYD6 125 aa13.59□□□□□ -0.23
TSPAN17-201ENST00000298564 CRYBG3Q68DQ2 2970 aa13.59□□□□□ -0.23
TSPAN17-201ENST00000298564 SPG11Q96JI7 2443 aa13.59□□□□□ -0.23
TSPAN17-201ENST00000298564 A0A1B0GWB2 263 aa13.59□□□□□ -0.23
TSPAN17-201ENST00000298564 GAGE13Q4V321 117 aa13.59□□□□□ -0.23
TSPAN17-201ENST00000298564 CLPSL1A2RUU4 121 aa13.58□□□□□ -0.24
TSPAN17-201ENST00000298564 M0R381 172 aa13.58□□□□□ -0.24
TSPAN17-201ENST00000298564 NRACQ8N912 160 aa13.58□□□□□ -0.24
TSPAN17-201ENST00000298564 ATP5LO75964 103 aa13.58□□□□□ -0.24
TSPAN17-201ENST00000298564 KLK9Q2XQG4 91 aa13.58□□□□□ -0.24
TSPAN17-201ENST00000298564 PTH2Q96A98 100 aa13.58□□□□□ -0.24
TSPAN17-201ENST00000298564 KLK9Q9UKQ9 250 aa13.58□□□□□ -0.24
TSPAN17-201ENST00000298564 COX8CQ7Z4L0 72 aa13.57□□□□□ -0.24
TSPAN17-201ENST00000298564 EEF1AKMT3Q96AZ1 226 aa13.57□□□□□ -0.24
TSPAN17-201ENST00000298564 PKD1L2Q7Z442 2459 aa13.57□□□□□ -0.24
TSPAN17-201ENST00000298564 IGHV4-61A0A0C4DH41 118 aa13.57□□□□□ -0.24
TSPAN17-201ENST00000298564 F8W1H4 67 aa13.56□□□□□ -0.24
TSPAN17-201ENST00000298564 KLHL30-AS1Q8NEE0 82 aa13.56□□□□□ -0.24
TSPAN17-201ENST00000298564 RPL39LQ96EH5 51 aaKnown RBP13.56□□□□□ -0.24
TSPAN17-201ENST00000298564 CHTOPQ9Y3Y2 248 aaKnown RBP13.56□□□□□ -0.24
TSPAN17-201ENST00000298564 A0A087WX48 190 aa13.56□□□□□ -0.24
TSPAN17-201ENST00000298564 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.56□□□□□ -0.24
TSPAN17-201ENST00000298564 ZNF418Q8TF45 676 aaPredicted RBP13.56□□□□□ -0.24
TSPAN17-201ENST00000298564 HIF1ANQ9NWT6 349 aa13.56□□□□□ -0.24
TSPAN17-201ENST00000298564 ABCA2Q9BZC7 2435 aa13.55□□□□□ -0.24
TSPAN17-201ENST00000298564 IGHV7-4-1A0A0J9YVY3 117 aa13.55□□□□□ -0.24
TSPAN17-201ENST00000298564 HLA-DRB4P13762 266 aa13.55□□□□□ -0.24
TSPAN17-201ENST00000298564 SCGB2A2Q13296 93 aa13.55□□□□□ -0.24
TSPAN17-201ENST00000298564 PIFOQ8TCI5 191 aa13.55□□□□□ -0.24
TSPAN17-201ENST00000298564 PGPEP1Q9NXJ5 209 aa13.55□□□□□ -0.24
TSPAN17-201ENST00000298564 HLA-DRB4X5D2U9 266 aa13.55□□□□□ -0.24
TSPAN17-201ENST00000298564 IGKV3-7A0A075B6H7 116 aa13.55□□□□□ -0.24
TSPAN17-201ENST00000298564 LOC107984156A0A0G2JMH3 177 aa13.55□□□□□ -0.24
TSPAN17-201ENST00000298564 LINC01559Q495D7 138 aa13.55□□□□□ -0.24
TSPAN17-201ENST00000298564 PRR9Q5T870 116 aa13.55□□□□□ -0.24
TSPAN17-201ENST00000298564 ARL17AQ8IVW1 177 aa13.55□□□□□ -0.24
TSPAN17-201ENST00000298564 CNFNQ9BYD5 112 aa13.55□□□□□ -0.24
TSPAN17-201ENST00000298564 CELSR2Q9HCU4 2923 aa13.55□□□□□ -0.24
TSPAN17-201ENST00000298564 TRBV7-1A0A0A6YYK4 115 aa13.54□□□□□ -0.24
TSPAN17-201ENST00000298564 IGHV1-69DA0A0B4J2H0 117 aa13.54□□□□□ -0.24
TSPAN17-201ENST00000298564 IGHV1-69P01742 117 aa13.54□□□□□ -0.24
TSPAN17-201ENST00000298564 ZFP2Q6ZN57 461 aa13.54□□□□□ -0.24
TSPAN17-201ENST00000298564 GLMPQ8WWB7 406 aa13.54□□□□□ -0.24
TSPAN17-201ENST00000298564 RAB9AP51151 201 aa13.54□□□□□ -0.24
TSPAN17-201ENST00000298564 RRN3P1Q2M238 152 aa13.54□□□□□ -0.24
TSPAN17-201ENST00000298564 MOB4Q9Y3A3 225 aa13.54□□□□□ -0.24
TSPAN17-201ENST00000298564 TRAV41A0A0B4J266 112 aa13.54□□□□□ -0.24
TSPAN17-201ENST00000298564 PLEKHB2Q96CS7 222 aa13.54□□□□□ -0.24
TSPAN17-201ENST00000298564 SCGB3A1Q96QR1 104 aa13.54□□□□□ -0.24
TSPAN17-201ENST00000298564 MRPL16Q9NX20 251 aaKnown RBP13.54□□□□□ -0.24
TSPAN17-201ENST00000298564 SRSF1Q07955 248 aaKnown RBP eCLIP13.53□□□□□ -0.24
TSPAN17-201ENST00000298564 C14orf178Q8N769 122 aaPredicted RBP13.53□□□□□ -0.24
TSPAN17-201ENST00000298564 CCL19Q99731 98 aa13.53□□□□□ -0.24
TSPAN17-201ENST00000298564 PIMREGQ9BSJ6 248 aa13.53□□□□□ -0.24
TSPAN17-201ENST00000298564 CFAP46Q8IYW2 2715 aa13.53□□□□□ -0.24
TSPAN17-201ENST00000298564 OR11H12B2RN74 326 aa13.53□□□□□ -0.24
TSPAN17-201ENST00000298564 APOMO95445 188 aa13.53□□□□□ -0.24
TSPAN17-201ENST00000298564 TMEM78Q5T7P6 136 aa13.53□□□□□ -0.24
TSPAN17-201ENST00000298564 MORN3Q6PF18 240 aaPredicted RBP13.53□□□□□ -0.24
TSPAN17-201ENST00000298564 OR11H1Q8NG94 326 aa13.53□□□□□ -0.24
TSPAN17-201ENST00000298564 OR11H2Q8NH07 326 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms