RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 FCER1GP30273 86 aa12.07□□□□□ -0.48
UBAP1-201ENST00000297661 CDIP1Q9H305 208 aa12.07□□□□□ -0.48
UBAP1-201ENST00000297661 MAP1LC3AQ9H492 121 aa12.07□□□□□ -0.48
UBAP1-201ENST00000297661 F8W735 103 aaPredicted RBP12.07□□□□□ -0.48
UBAP1-201ENST00000297661 SH2D1AO60880 128 aa12.07□□□□□ -0.48
UBAP1-201ENST00000297661 FOXI1Q12951 378 aa12.07□□□□□ -0.48
UBAP1-201ENST00000297661 TMEM160Q9NX00 188 aa12.07□□□□□ -0.48
UBAP1-201ENST00000297661 GAS8-AS1O95177 125 aa12.06□□□□□ -0.48
UBAP1-201ENST00000297661 HIST1H4GQ99525 98 aa12.06□□□□□ -0.48
UBAP1-201ENST00000297661 CYSLTR1Q9Y271 337 aa12.06□□□□□ -0.48
UBAP1-201ENST00000297661 TRAV40A0A0B4J280 105 aa12.06□□□□□ -0.48
UBAP1-201ENST00000297661 TAL2Q16559 108 aa12.06□□□□□ -0.48
UBAP1-201ENST00000297661 OR11H6Q8NGC7 330 aa12.06□□□□□ -0.48
UBAP1-201ENST00000297661 RNF5Q99942 180 aa12.06□□□□□ -0.48
UBAP1-201ENST00000297661 RAB1BQ9H0U4 201 aa12.06□□□□□ -0.48
UBAP1-201ENST00000297661 MT-ATP8P03928 68 aa12.05□□□□□ -0.48
UBAP1-201ENST00000297661 HLA-DRB4P13762 266 aa12.05□□□□□ -0.48
UBAP1-201ENST00000297661 VMO1Q7Z5L0 202 aa12.05□□□□□ -0.48
UBAP1-201ENST00000297661 TIMD4Q96H15 378 aa12.05□□□□□ -0.48
UBAP1-201ENST00000297661 HLA-DRB4X5D2U9 266 aa12.05□□□□□ -0.48
UBAP1-201ENST00000297661 IGLV11-55A0A075B6I3 123 aa12.04□□□□□ -0.48
UBAP1-201ENST00000297661 ZFP36P26651 326 aaKnown RBP12.04□□□□□ -0.48
UBAP1-201ENST00000297661 C1QTNF4Q9BXJ3 329 aa12.04□□□□□ -0.48
UBAP1-201ENST00000297661 C21orf62Q9NYP8 219 aa12.04□□□□□ -0.48
UBAP1-201ENST00000297661 NDUFA3O95167 84 aa12.04□□□□□ -0.48
UBAP1-201ENST00000297661 TSPAN13O95857 204 aa12.04□□□□□ -0.48
UBAP1-201ENST00000297661 MFAP4P55083 255 aa12.04□□□□□ -0.48
UBAP1-201ENST00000297661 LCNL1Q6ZST4 164 aa12.04□□□□□ -0.48
UBAP1-201ENST00000297661 NPBQ8NG41 125 aa12.04□□□□□ -0.48
UBAP1-201ENST00000297661 AAMDCQ9H7C9 122 aa12.04□□□□□ -0.48
UBAP1-201ENST00000297661 GATA3P23771 443 aa12.03□□□□□ -0.48
UBAP1-201ENST00000297661 LYPD1Q8N2G4 141 aa12.03□□□□□ -0.48
UBAP1-201ENST00000297661 TMEM158Q8WZ71 300 aa12.03□□□□□ -0.48
UBAP1-201ENST00000297661 MSRB1Q9NZV6 116 aa12.03□□□□□ -0.48
UBAP1-201ENST00000297661 ITPR2Q14571 2701 aa12.03□□□□□ -0.48
UBAP1-201ENST00000297661 IGHV3OR16-13A0A075B7E8 117 aa12.03□□□□□ -0.48
UBAP1-201ENST00000297661 IGHV3-74A0A0B4J1X5 117 aa12.03□□□□□ -0.48
UBAP1-201ENST00000297661 IGHV3-66A0A0C4DH42 116 aa12.03□□□□□ -0.48
UBAP1-201ENST00000297661 ATP5LO75964 103 aa12.03□□□□□ -0.48
UBAP1-201ENST00000297661 RNF185Q96GF1 192 aa12.03□□□□□ -0.48
UBAP1-201ENST00000297661 MRPL35Q9NZE8 188 aaKnown RBP12.03□□□□□ -0.48
UBAP1-201ENST00000297661 LINC01546A6NGU7 62 aa12.02□□□□□ -0.48
UBAP1-201ENST00000297661 ODF3BA8MYP8 253 aa12.02□□□□□ -0.48
UBAP1-201ENST00000297661 PRTN3P24158 256 aa12.02□□□□□ -0.48
UBAP1-201ENST00000297661 FHL3Q13643 280 aa12.02□□□□□ -0.48
UBAP1-201ENST00000297661 TNFRSF6BO95407 300 aa12.02□□□□□ -0.49
UBAP1-201ENST00000297661 EGR2P11161 476 aaPredicted RBP12.02□□□□□ -0.49
UBAP1-201ENST00000297661 NFE4Q86UQ8 179 aa12.02□□□□□ -0.49
UBAP1-201ENST00000297661 RNF183Q96D59 192 aa12.02□□□□□ -0.49
UBAP1-201ENST00000297661 SRSF8Q9BRL6 282 aaKnown RBP12.02□□□□□ -0.49
UBAP1-201ENST00000297661 NXT2Q9NPJ8 142 aaKnown RBP12.02□□□□□ -0.49
UBAP1-201ENST00000297661 SETXQ7Z333 2677 aaKnown RBP12.02□□□□□ -0.49
UBAP1-201ENST00000297661 A0A1W2PPR1 153 aa12.02□□□□□ -0.49
UBAP1-201ENST00000297661 SMCPP49901 116 aaPredicted RBP12.02□□□□□ -0.49
UBAP1-201ENST00000297661 XGP55808 180 aa12.02□□□□□ -0.49
UBAP1-201ENST00000297661 Q6ZUT4 128 aa12.02□□□□□ -0.49
UBAP1-201ENST00000297661 TRBV7-3A0A075B6L6 115 aa12.01□□□□□ -0.49
UBAP1-201ENST00000297661 ZNF80P51504 273 aaPredicted RBP12.01□□□□□ -0.49
UBAP1-201ENST00000297661 ATP6V0E2Q8NHE4 81 aa12.01□□□□□ -0.49
UBAP1-201ENST00000297661 GLMPQ8WWB7 406 aa12.01□□□□□ -0.49
UBAP1-201ENST00000297661 TMEM190Q8WZ59 177 aa12.01□□□□□ -0.49
UBAP1-201ENST00000297661 GATA1P15976 413 aaPredicted RBP12.01□□□□□ -0.49
UBAP1-201ENST00000297661 ECSCRQ19T08 205 aa12.01□□□□□ -0.49
UBAP1-201ENST00000297661 CFAP126Q5VTH2 177 aa12.01□□□□□ -0.49
UBAP1-201ENST00000297661 MORN3Q6PF18 240 aaPredicted RBP12.01□□□□□ -0.49
UBAP1-201ENST00000297661 IGHV3-49A0A0A0MS15 119 aa12□□□□□ -0.49
UBAP1-201ENST00000297661 CTSGP08311 255 aa12□□□□□ -0.49
UBAP1-201ENST00000297661 SMAD5-AS1Q9Y6J3 95 aa12□□□□□ -0.49
UBAP1-201ENST00000297661 LINC01559Q495D7 138 aa12□□□□□ -0.49
UBAP1-201ENST00000297661 ERG28Q9UKR5 140 aa12□□□□□ -0.49
UBAP1-201ENST00000297661 OR11H12B2RN74 326 aa11.99□□□□□ -0.49
UBAP1-201ENST00000297661 IGLC6P0CF74 106 aa11.99□□□□□ -0.49
UBAP1-201ENST00000297661 ERCC8Q13216 396 aa11.99□□□□□ -0.49
UBAP1-201ENST00000297661 FBXL19-AS1Q494R0 122 aa11.99□□□□□ -0.49
UBAP1-201ENST00000297661 OR11H1Q8NG94 326 aa11.99□□□□□ -0.49
UBAP1-201ENST00000297661 OR11H2Q8NH07 326 aa11.99□□□□□ -0.49
UBAP1-201ENST00000297661 PGPEP1Q9NXJ5 209 aa11.99□□□□□ -0.49
UBAP1-201ENST00000297661 IGHV7-81A0A0B4J1V7 117 aa11.99□□□□□ -0.49
UBAP1-201ENST00000297661 RNF182Q8N6D2 247 aa11.99□□□□□ -0.49
UBAP1-201ENST00000297661 PSMG3-AS1Q96PY0 264 aa11.99□□□□□ -0.49
UBAP1-201ENST00000297661 SS18L2Q9UHA2 77 aa11.99□□□□□ -0.49
UBAP1-201ENST00000297661 M0R1W7 72 aa11.98□□□□□ -0.49
UBAP1-201ENST00000297661 HOXA3O43365 443 aaPredicted RBP11.98□□□□□ -0.49
UBAP1-201ENST00000297661 C11orf71Q6IPW1 123 aa11.98□□□□□ -0.49
UBAP1-201ENST00000297661 UNC79Q9P2D8 2635 aa11.98□□□□□ -0.49
UBAP1-201ENST00000297661 APCP25054 2843 aa11.98□□□□□ -0.49
UBAP1-201ENST00000297661 LINC01548A6NM66 108 aa11.98□□□□□ -0.49
UBAP1-201ENST00000297661 NRGNQ92686 78 aa11.98□□□□□ -0.49
UBAP1-201ENST00000297661 DLX4Q92988 240 aaPredicted RBP11.98□□□□□ -0.49
UBAP1-201ENST00000297661 CCDC168Q8NDH2 2452 aa11.98□□□□□ -0.49
UBAP1-201ENST00000297661 PRAC2D3DTV9 90 aa11.97□□□□□ -0.49
UBAP1-201ENST00000297661 IGHG4P01861 327 aa11.97□□□□□ -0.49
UBAP1-201ENST00000297661 PRR25Q96S07 402 aa11.97□□□□□ -0.49
UBAP1-201ENST00000297661 MYOZ3Q8TDC0 251 aa11.97□□□□□ -0.49
UBAP1-201ENST00000297661 PTH2Q96A98 100 aa11.97□□□□□ -0.49
UBAP1-201ENST00000297661 C15orf32Q32M92 178 aa11.96□□□□□ -0.49
UBAP1-201ENST00000297661 ZNF575Q86XF7 245 aa11.96□□□□□ -0.49
UBAP1-201ENST00000297661 Q8N8P6 123 aa11.96□□□□□ -0.49
UBAP1-201ENST00000297661 G3V318 75 aa11.96□□□□□ -0.49
UBAP1-201ENST00000297661 ORM1P02763 201 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms