RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 RAB1BQ9H0U4 201 aa13.02□□□□□ -0.33
SBSPON-201ENST00000297354 IGKV3D-20A0A0C4DH25 116 aa13.02□□□□□ -0.33
SBSPON-201ENST00000297354 FSTL3O95633 263 aa13.02□□□□□ -0.33
SBSPON-201ENST00000297354 IGLV1-44P01699 117 aa13.02□□□□□ -0.33
SBSPON-201ENST00000297354 ZNF56Q15929 161 aa13.02□□□□□ -0.33
SBSPON-201ENST00000297354 Q6ZQT7 251 aa13.02□□□□□ -0.33
SBSPON-201ENST00000297354 TEN1Q86WV5 123 aa13.02□□□□□ -0.33
SBSPON-201ENST00000297354 TMEM14CQ9P0S9 112 aa13.02□□□□□ -0.33
SBSPON-201ENST00000297354 ERG28Q9UKR5 140 aa13.02□□□□□ -0.33
SBSPON-201ENST00000297354 TEX36Q5VZQ5 186 aa13.01□□□□□ -0.33
SBSPON-201ENST00000297354 LGALS1P09382 135 aaKnown RBP13.01□□□□□ -0.33
SBSPON-201ENST00000297354 LOXP28300 417 aaPredicted RBP13.01□□□□□ -0.33
SBSPON-201ENST00000297354 RNASE4P34096 147 aaKnown RBP13.01□□□□□ -0.33
SBSPON-201ENST00000297354 CR1LQ2VPA4 569 aa13.01□□□□□ -0.33
SBSPON-201ENST00000297354 CEP295Q9C0D2 2601 aa13□□□□□ -0.33
SBSPON-201ENST00000297354 TMEM178BH3BS89 294 aa13□□□□□ -0.33
SBSPON-201ENST00000297354 K7EIM0 57 aa13□□□□□ -0.33
SBSPON-201ENST00000297354 NBR2O15453 112 aa13□□□□□ -0.33
SBSPON-201ENST00000297354 PSMG4Q5JS54 123 aa13□□□□□ -0.33
SBSPON-201ENST00000297354 A0A087WWL8 130 aa13□□□□□ -0.33
SBSPON-201ENST00000297354 ZNF493Q6ZR52 646 aa13□□□□□ -0.33
SBSPON-201ENST00000297354 SONP18583 2426 aaKnown RBP13□□□□□ -0.33
SBSPON-201ENST00000297354 A0A1W2PNU3 283 aaPredicted RBP13□□□□□ -0.33
SBSPON-201ENST00000297354 MEIG1Q5JSS6 88 aa13□□□□□ -0.33
SBSPON-201ENST00000297354 LYPD1Q8N2G4 141 aa13□□□□□ -0.33
SBSPON-201ENST00000297354 SETD2Q9BYW2 2564 aaPredicted RBP12.99□□□□□ -0.33
SBSPON-201ENST00000297354 IGLV3-9A0A075B6K5 115 aa12.99□□□□□ -0.33
SBSPON-201ENST00000297354 I3L2K1 104 aa12.99□□□□□ -0.33
SBSPON-201ENST00000297354 C15orf53Q8NAA6 179 aa12.99□□□□□ -0.33
SBSPON-201ENST00000297354 CCDC179H3BU77 68 aa12.99□□□□□ -0.33
SBSPON-201ENST00000297354 K7EM74 188 aa12.99□□□□□ -0.33
SBSPON-201ENST00000297354 TMEM30BQ3MIR4 351 aa12.99□□□□□ -0.33
SBSPON-201ENST00000297354 CITED1Q99966 193 aa12.99□□□□□ -0.33
SBSPON-201ENST00000297354 IFITM1P13164 125 aa12.99□□□□□ -0.33
SBSPON-201ENST00000297354 PTPN13Q12923 2485 aa12.99□□□□□ -0.33
SBSPON-201ENST00000297354 BUB1B-PAK6H3BSN5 160 aa12.98□□□□□ -0.33
SBSPON-201ENST00000297354 SUMO2P61956 95 aaKnown RBP12.98□□□□□ -0.33
SBSPON-201ENST00000297354 ORMDL2Q53FV1 153 aa12.98□□□□□ -0.33
SBSPON-201ENST00000297354 SHISA2Q6UWI4 295 aa12.98□□□□□ -0.33
SBSPON-201ENST00000297354 FAM159AQ6UWV7 190 aa12.98□□□□□ -0.33
SBSPON-201ENST00000297354 RS1O15537 224 aa12.98□□□□□ -0.33
SBSPON-201ENST00000297354 CRYGCP07315 174 aa12.98□□□□□ -0.33
SBSPON-201ENST00000297354 ASCL5Q7RTU5 278 aa12.97□□□□□ -0.33
SBSPON-201ENST00000297354 PHLDA1Q8WV24 401 aaPredicted RBP12.97□□□□□ -0.33
SBSPON-201ENST00000297354 RNF185Q96GF1 192 aa12.97□□□□□ -0.33
SBSPON-201ENST00000297354 SMIM2Q9BVW6 85 aa12.97□□□□□ -0.33
SBSPON-201ENST00000297354 CEP192Q8TEP8 1941 aa12.97□□□□□ -0.33
SBSPON-201ENST00000297354 C15orf32Q32M92 178 aa12.97□□□□□ -0.33
SBSPON-201ENST00000297354 C2orf82Q6UX34 121 aa12.97□□□□□ -0.33
SBSPON-201ENST00000297354 DEFB124Q8NES8 71 aa12.97□□□□□ -0.33
SBSPON-201ENST00000297354 TP53TG1Q9Y2A0 90 aa12.97□□□□□ -0.33
SBSPON-201ENST00000297354 CUL9Q8IWT3 2517 aa12.97□□□□□ -0.33
SBSPON-201ENST00000297354 IGHV3OR16-10A0A075B7F0 116 aa12.96□□□□□ -0.33
SBSPON-201ENST00000297354 TEX22C9J3V5 150 aa12.96□□□□□ -0.33
SBSPON-201ENST00000297354 TAL2Q16559 108 aa12.96□□□□□ -0.33
SBSPON-201ENST00000297354 CDIP1Q9H305 208 aa12.96□□□□□ -0.33
SBSPON-201ENST00000297354 DMDP11532 3685 aa12.96□□□□□ -0.33
SBSPON-201ENST00000297354 TRAV4A0A0B4J268 109 aa12.96□□□□□ -0.33
SBSPON-201ENST00000297354 DUSP14O95147 198 aaKnown RBP12.96□□□□□ -0.33
SBSPON-201ENST00000297354 PRO1854Q9UHT4 67 aa12.96□□□□□ -0.33
SBSPON-201ENST00000297354 TIMD4Q96H15 378 aa12.96□□□□□ -0.34
SBSPON-201ENST00000297354 AGPAT4-IT1Q9H0P7 198 aa12.96□□□□□ -0.34
SBSPON-201ENST00000297354 DPM3Q9P2X0 92 aa12.96□□□□□ -0.34
SBSPON-201ENST00000297354 MUC3AQ02505 3323 aa12.95□□□□□ -0.34
SBSPON-201ENST00000297354 CFAP126Q5VTH2 177 aa12.95□□□□□ -0.34
SBSPON-201ENST00000297354 C10orf126Q8N4M7 172 aa12.95□□□□□ -0.34
SBSPON-201ENST00000297354 METTL26Q96S19 204 aa12.95□□□□□ -0.34
SBSPON-201ENST00000297354 MYO9AB2RTY4 2548 aa12.95□□□□□ -0.34
SBSPON-201ENST00000297354 RPL39P62891 51 aaKnown RBP12.95□□□□□ -0.34
SBSPON-201ENST00000297354 MORN3Q6PF18 240 aaPredicted RBP12.95□□□□□ -0.34
SBSPON-201ENST00000297354 TRBV7-9A0A0J9YWB2 115 aa12.94□□□□□ -0.34
SBSPON-201ENST00000297354 TRAV8-3A0A0A6YYJ7 113 aa12.94□□□□□ -0.34
SBSPON-201ENST00000297354 ASIPP42127 132 aa12.94□□□□□ -0.34
SBSPON-201ENST00000297354 KLRB1Q12918 225 aa12.94□□□□□ -0.34
SBSPON-201ENST00000297354 MRPL23Q16540 153 aaKnown RBP12.94□□□□□ -0.34
SBSPON-201ENST00000297354 A4D1N5 150 aa12.94□□□□□ -0.34
SBSPON-201ENST00000297354 RNASE6Q93091 150 aaKnown RBP12.94□□□□□ -0.34
SBSPON-201ENST00000297354 OR10J6PQ8NGY7 276 aa12.93□□□□□ -0.34
SBSPON-201ENST00000297354 UBTD1Q9HAC8 227 aa12.93□□□□□ -0.34
SBSPON-201ENST00000297354 TEX49A0A1B0GTD5 131 aa12.93□□□□□ -0.34
SBSPON-201ENST00000297354 IGHV3-11P01762 117 aa12.93□□□□□ -0.34
SBSPON-201ENST00000297354 COX6CP09669 75 aa12.93□□□□□ -0.34
SBSPON-201ENST00000297354 GATA4P43694 442 aa12.93□□□□□ -0.34
SBSPON-201ENST00000297354 PDE6HQ13956 83 aa12.93□□□□□ -0.34
SBSPON-201ENST00000297354 CFAP161Q6P656 301 aa12.93□□□□□ -0.34
SBSPON-201ENST00000297354 LINC00477Q96M19 166 aa12.93□□□□□ -0.34
SBSPON-201ENST00000297354 SPXQ9BT56 116 aa12.93□□□□□ -0.34
SBSPON-201ENST00000297354 LINC01560Q8TB33 94 aa12.93□□□□□ -0.34
SBSPON-201ENST00000297354 DKK4Q9UBT3 224 aa12.92□□□□□ -0.34
SBSPON-201ENST00000297354 RNASE13Q5GAN3 156 aaKnown RBP12.92□□□□□ -0.34
SBSPON-201ENST00000297354 C11orf86A6NJI1 115 aa12.92□□□□□ -0.34
SBSPON-201ENST00000297354 SMCPP49901 116 aaPredicted RBP12.92□□□□□ -0.34
SBSPON-201ENST00000297354 F6UB75 175 aa12.91□□□□□ -0.34
SBSPON-201ENST00000297354 CRIP2P52943 208 aaPredicted RBP12.91□□□□□ -0.34
SBSPON-201ENST00000297354 DUX3Q96PT4 197 aa12.91□□□□□ -0.34
SBSPON-201ENST00000297354 NDUFV3P56181 108 aaKnown RBP12.91□□□□□ -0.34
SBSPON-201ENST00000297354 OPRPNQ99935 248 aaPredicted RBP12.91□□□□□ -0.34
SBSPON-201ENST00000297354 U3KQK5 164 aa12.91□□□□□ -0.34
SBSPON-201ENST00000297354 VCX2Q9H322 139 aa12.91□□□□□ -0.34
SBSPON-201ENST00000297354 TRBV7-3A0A075B6L6 115 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms