RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 MUC21A0A0G2JKD1 596 aa16.95■□□□□ 0.3
PTX3-201ENST00000295927 MUC21A0A140T8X8 626 aa16.95■□□□□ 0.3
PTX3-201ENST00000295927 A0A1B0GW15 77 aa16.95■□□□□ 0.3
PTX3-201ENST00000295927 SSTP61278 116 aa16.95■□□□□ 0.3
PTX3-201ENST00000295927 MUC21Q5SSG8 566 aa16.95■□□□□ 0.3
PTX3-201ENST00000295927 JMJD1CQ15652 2540 aa16.94■□□□□ 0.3
PTX3-201ENST00000295927 HLA-DRB4P13762 266 aa16.94■□□□□ 0.3
PTX3-201ENST00000295927 GFI1BQ5VTD9 330 aa16.94■□□□□ 0.3
PTX3-201ENST00000295927 AMTNQ6UX39 209 aa16.94■□□□□ 0.3
PTX3-201ENST00000295927 HLA-DRB4X5D2U9 266 aa16.94■□□□□ 0.3
PTX3-201ENST00000295927 M0R2Z0 102 aa16.94■□□□□ 0.3
PTX3-201ENST00000295927 IGLV1-51P01701 117 aa16.94■□□□□ 0.3
PTX3-201ENST00000295927 LINC00482Q8N8I6 264 aa16.94■□□□□ 0.3
PTX3-201ENST00000295927 H3BMM0 161 aa16.93■□□□□ 0.3
PTX3-201ENST00000295927 S100A8P05109 93 aa16.93■□□□□ 0.3
PTX3-201ENST00000295927 ANXA2RQ3ZCQ2 193 aa16.93■□□□□ 0.3
PTX3-201ENST00000295927 COA6Q5JTJ3 125 aaKnown RBP16.93■□□□□ 0.3
PTX3-201ENST00000295927 CITED1Q99966 193 aa16.93■□□□□ 0.3
PTX3-201ENST00000295927 C7orf71A4D174 169 aa16.92■□□□□ 0.3
PTX3-201ENST00000295927 A8MTW9 85 aa16.92■□□□□ 0.3
PTX3-201ENST00000295927 F2Z2F3 143 aa16.92■□□□□ 0.3
PTX3-201ENST00000295927 TSPOP30536 169 aa16.92■□□□□ 0.3
PTX3-201ENST00000295927 CDKN1BP46527 198 aa16.92■□□□□ 0.3
PTX3-201ENST00000295927 SPINK13Q1W4C9 94 aa16.92■□□□□ 0.3
PTX3-201ENST00000295927 ODF3L2Q3SX64 289 aa16.92■□□□□ 0.3
PTX3-201ENST00000295927 GATD1Q8NB37 220 aa16.92■□□□□ 0.3
PTX3-201ENST00000295927 TRAV12-3A0A0B4J271 114 aa16.92■□□□□ 0.3
PTX3-201ENST00000295927 CNFNQ9BYD5 112 aa16.92■□□□□ 0.3
PTX3-201ENST00000295927 TRAV12-2A0A075B6T6 113 aa16.91■□□□□ 0.3
PTX3-201ENST00000295927 NTF3P20783 257 aa16.9■□□□□ 0.3
PTX3-201ENST00000295927 SRIP30626 198 aa16.9■□□□□ 0.3
PTX3-201ENST00000295927 ZNF324O75467 553 aaPredicted RBP16.9■□□□□ 0.3
PTX3-201ENST00000295927 TWIST1Q15672 202 aa16.9■□□□□ 0.3
PTX3-201ENST00000295927 HIST3H2BBQ8N257 126 aa16.9■□□□□ 0.3
PTX3-201ENST00000295927 OR2K2Q8NGT1 345 aa16.9■□□□□ 0.3
PTX3-201ENST00000295927 TENM1Q9UKZ4 2725 aa16.9■□□□□ 0.3
PTX3-201ENST00000295927 PDZD11Q5EBL8 140 aa16.89■□□□□ 0.29
PTX3-201ENST00000295927 ZNF493Q6ZR52 646 aa16.89■□□□□ 0.29
PTX3-201ENST00000295927 RBMY1BA6NDE4 496 aaKnown RBP16.88■□□□□ 0.29
PTX3-201ENST00000295927 RBMY1EA6NEQ0 496 aaKnown RBP16.88■□□□□ 0.29
PTX3-201ENST00000295927 RBMY1DP0C7P1 496 aaKnown RBP16.88■□□□□ 0.29
PTX3-201ENST00000295927 IFITM10A6NMD0 228 aa16.88■□□□□ 0.29
PTX3-201ENST00000295927 H3BVH4 76 aa16.88■□□□□ 0.29
PTX3-201ENST00000295927 OR5AL1P0C617 328 aa16.88■□□□□ 0.29
PTX3-201ENST00000295927 AKR1D1P51857 326 aa16.88■□□□□ 0.29
PTX3-201ENST00000295927 FXYD7P58549 80 aa16.88■□□□□ 0.29
PTX3-201ENST00000295927 MSRB1Q9NZV6 116 aa16.88■□□□□ 0.29
PTX3-201ENST00000295927 TEP1Q99973 2627 aaKnown RBP16.87■□□□□ 0.29
PTX3-201ENST00000295927 LOC102724200A0A096LPH7 203 aaPredicted RBP16.87■□□□□ 0.29
PTX3-201ENST00000295927 OR11H12B2RN74 326 aa16.87■□□□□ 0.29
PTX3-201ENST00000295927 GNRH2O43555 120 aa16.87■□□□□ 0.29
PTX3-201ENST00000295927 SNAI2O43623 268 aa16.87■□□□□ 0.29
PTX3-201ENST00000295927 Q0VG73 95 aa16.87■□□□□ 0.29
PTX3-201ENST00000295927 FAM159AQ6UWV7 190 aa16.87■□□□□ 0.29
PTX3-201ENST00000295927 OR10AG1Q8NH19 301 aa16.87■□□□□ 0.29
PTX3-201ENST00000295927 TP53TG3Q9ULZ0 132 aa16.87■□□□□ 0.29
PTX3-201ENST00000295927 ASIPP42127 132 aa16.86■□□□□ 0.29
PTX3-201ENST00000295927 TMEM256Q8N2U0 113 aa16.86■□□□□ 0.29
PTX3-201ENST00000295927 ALKBH7Q9BT30 221 aaPredicted RBP16.86■□□□□ 0.29
PTX3-201ENST00000295927 ATRQ13535 2644 aa16.85■□□□□ 0.29
PTX3-201ENST00000295927 S100A4P26447 101 aaKnown RBP16.85■□□□□ 0.29
PTX3-201ENST00000295927 OR10J3Q5JRS4 329 aa16.85■□□□□ 0.29
PTX3-201ENST00000295927 KCNS1Q96KK3 526 aa16.85■□□□□ 0.29
PTX3-201ENST00000295927 TIMM8BQ9Y5J9 83 aaPredicted RBP16.85■□□□□ 0.29
PTX3-201ENST00000295927 BEAN1Q3B7T3 259 aa16.84■□□□□ 0.29
PTX3-201ENST00000295927 KRTAP24-1Q3LI83 254 aa16.84■□□□□ 0.29
PTX3-201ENST00000295927 DNLZQ5SXM8 178 aa16.84■□□□□ 0.29
PTX3-201ENST00000295927 BAGE3Q86Y29 109 aa16.84■□□□□ 0.29
PTX3-201ENST00000295927 CRXO43186 299 aaPredicted RBP16.84■□□□□ 0.29
PTX3-201ENST00000295927 S100A2P29034 98 aa16.83■□□□□ 0.28
PTX3-201ENST00000295927 CMC4P56277 68 aaPredicted RBP16.83■□□□□ 0.28
PTX3-201ENST00000295927 TDRG1Q3Y452 100 aa16.83■□□□□ 0.28
PTX3-201ENST00000295927 FAM104BQ5XKR9 115 aa16.83■□□□□ 0.28
PTX3-201ENST00000295927 SPATA3Q8NHX4 192 aa16.83■□□□□ 0.28
PTX3-201ENST00000295927 C18orf32Q8TCD1 76 aa16.83■□□□□ 0.28
PTX3-201ENST00000295927 NUPR1O60356 82 aa16.82■□□□□ 0.28
PTX3-201ENST00000295927 MED14OSP0DP75 135 aa16.82■□□□□ 0.28
PTX3-201ENST00000295927 RNASE3P12724 160 aaKnown RBP16.82■□□□□ 0.28
PTX3-201ENST00000295927 CACNG7P62955 275 aa16.82■□□□□ 0.28
PTX3-201ENST00000295927 SPANXN1Q5VSR9 72 aa16.82■□□□□ 0.28
PTX3-201ENST00000295927 AMN1Q8IY45 258 aa16.82■□□□□ 0.28
PTX3-201ENST00000295927 CLUHP3Q96NS8 147 aa16.82■□□□□ 0.28
PTX3-201ENST00000295927 TMEM191AQ9H0A3 160 aa16.82■□□□□ 0.28
PTX3-201ENST00000295927 IGHV4-4A0A075B6R2 117 aa16.82■□□□□ 0.28
PTX3-201ENST00000295927 CD7P09564 240 aa16.82■□□□□ 0.28
PTX3-201ENST00000295927 LINC00310P59036 64 aa16.82■□□□□ 0.28
PTX3-201ENST00000295927 STHQ8IWL8 128 aa16.82■□□□□ 0.28
PTX3-201ENST00000295927 SERF1AO75920 110 aa16.81■□□□□ 0.28
PTX3-201ENST00000295927 RBMY1A1P0DJD3 496 aaKnown RBP16.81■□□□□ 0.28
PTX3-201ENST00000295927 RBMY1CP0DJD4 496 aa16.81■□□□□ 0.28
PTX3-201ENST00000295927 RBMY1FQ15415 496 aaKnown RBP16.81■□□□□ 0.28
PTX3-201ENST00000295927 IQCJQ1A5X6 159 aa16.81■□□□□ 0.28
PTX3-201ENST00000295927 SCRT2Q9NQ03 307 aa16.81■□□□□ 0.28
PTX3-201ENST00000295927 IGHV1OR15-1A0A075B7D0 117 aa16.8■□□□□ 0.28
PTX3-201ENST00000295927 SPRY2O43597 315 aa16.8■□□□□ 0.28
PTX3-201ENST00000295927 FABP4P15090 132 aa16.8■□□□□ 0.28
PTX3-201ENST00000295927 HIST1H2BLQ99880 126 aa16.8■□□□□ 0.28
PTX3-201ENST00000295927 FAM110AQ9BQ89 295 aa16.8■□□□□ 0.28
PTX3-201ENST00000295927 TRPT1Q86TN4 253 aaKnown RBP16.79■□□□□ 0.28
PTX3-201ENST00000295927 RCHY1Q96PM5 261 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms