RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 MXRA5Q9NR99 2828 aa12.04□□□□□ -0.48
NCKIPSD-201ENST00000294129 TNFRSF6BO95407 300 aa12.03□□□□□ -0.48
NCKIPSD-201ENST00000294129 IGHV4-59P01825 116 aa12.03□□□□□ -0.48
NCKIPSD-201ENST00000294129 GPHB5Q86YW7 130 aa12.03□□□□□ -0.48
NCKIPSD-201ENST00000294129 SCRT2Q9NQ03 307 aa12.03□□□□□ -0.48
NCKIPSD-201ENST00000294129 K7EP13 123 aa12.03□□□□□ -0.48
NCKIPSD-201ENST00000294129 B4DSR2 109 aa12.02□□□□□ -0.49
NCKIPSD-201ENST00000294129 M0R381 172 aa12.02□□□□□ -0.49
NCKIPSD-201ENST00000294129 LEPP41159 167 aa12.02□□□□□ -0.49
NCKIPSD-201ENST00000294129 C9orf47Q6ZRZ4 202 aa12.02□□□□□ -0.49
NCKIPSD-201ENST00000294129 NDUFA4O00483 81 aa12.02□□□□□ -0.49
NCKIPSD-201ENST00000294129 C9orf139Q6ZV77 190 aa12.02□□□□□ -0.49
NCKIPSD-201ENST00000294129 OR10J6PQ8NGY7 276 aa12.02□□□□□ -0.49
NCKIPSD-201ENST00000294129 IFI27L1Q96BM0 104 aa12.02□□□□□ -0.49
NCKIPSD-201ENST00000294129 RHPN1-AS1Q9BWJ2 59 aa12.02□□□□□ -0.49
NCKIPSD-201ENST00000294129 TEX15Q9BXT5 2789 aa12.02□□□□□ -0.49
NCKIPSD-201ENST00000294129 AMMECR1LQ6DCA0 310 aa12.01□□□□□ -0.49
NCKIPSD-201ENST00000294129 CCDC168Q8NDH2 2452 aa12.01□□□□□ -0.49
NCKIPSD-201ENST00000294129 IGHV7-4-1A0A0J9YVY3 117 aa12.01□□□□□ -0.49
NCKIPSD-201ENST00000294129 ANKRD39Q53RE8 183 aa12.01□□□□□ -0.49
NCKIPSD-201ENST00000294129 C12orf54Q6X4T0 127 aa12.01□□□□□ -0.49
NCKIPSD-201ENST00000294129 AGRNO00468 2067 aa12.01□□□□□ -0.49
NCKIPSD-201ENST00000294129 S100A4P26447 101 aaKnown RBP12□□□□□ -0.49
NCKIPSD-201ENST00000294129 RNASE4P34096 147 aaKnown RBP12□□□□□ -0.49
NCKIPSD-201ENST00000294129 DEFB112Q30KQ8 113 aa12□□□□□ -0.49
NCKIPSD-201ENST00000294129 SMIM15Q7Z3B0 74 aa12□□□□□ -0.49
NCKIPSD-201ENST00000294129 DEFB125Q8N687 156 aa12□□□□□ -0.49
NCKIPSD-201ENST00000294129 PSMG3-AS1Q96PY0 264 aa12□□□□□ -0.49
NCKIPSD-201ENST00000294129 TGFAP01135 160 aa12□□□□□ -0.49
NCKIPSD-201ENST00000294129 CNFNQ9BYD5 112 aa12□□□□□ -0.49
NCKIPSD-201ENST00000294129 USMG5Q96IX5 58 aa12□□□□□ -0.49
NCKIPSD-201ENST00000294129 DKK2Q9UBU2 259 aa12□□□□□ -0.49
NCKIPSD-201ENST00000294129 CRIP2P52943 208 aaPredicted RBP11.99□□□□□ -0.49
NCKIPSD-201ENST00000294129 SRSF2Q01130 221 aaKnown RBP11.99□□□□□ -0.49
NCKIPSD-201ENST00000294129 SETD2Q9BYW2 2564 aaPredicted RBP11.99□□□□□ -0.49
NCKIPSD-201ENST00000294129 MRPL53Q96EL3 112 aaKnown RBP11.99□□□□□ -0.49
NCKIPSD-201ENST00000294129 CUBNO60494 3623 aa11.98□□□□□ -0.49
NCKIPSD-201ENST00000294129 CDKN1BP46527 198 aa11.98□□□□□ -0.49
NCKIPSD-201ENST00000294129 IGKV3-20P01619 116 aa11.97□□□□□ -0.49
NCKIPSD-201ENST00000294129 PPBPP02775 128 aa11.97□□□□□ -0.49
NCKIPSD-201ENST00000294129 PRSS1P07477 247 aa11.97□□□□□ -0.49
NCKIPSD-201ENST00000294129 NMUP48645 174 aa11.97□□□□□ -0.49
NCKIPSD-201ENST00000294129 TMEM158Q8WZ71 300 aa11.97□□□□□ -0.49
NCKIPSD-201ENST00000294129 SPOCK3Q9BQ16 436 aa11.97□□□□□ -0.49
NCKIPSD-201ENST00000294129 MS4A6AQ9H2W1 248 aa11.97□□□□□ -0.49
NCKIPSD-201ENST00000294129 ZFAND2AQ8N6M9 145 aa11.97□□□□□ -0.49
NCKIPSD-201ENST00000294129 OR2K2Q8NGT1 345 aa11.97□□□□□ -0.49
NCKIPSD-201ENST00000294129 DEFB104AQ8WTQ1 72 aa11.97□□□□□ -0.49
NCKIPSD-201ENST00000294129 DAZ1Q9NQZ3 744 aaKnown RBP11.97□□□□□ -0.49
NCKIPSD-201ENST00000294129 TRAV8-6A0A0B4J262 113 aa11.96□□□□□ -0.49
NCKIPSD-201ENST00000294129 A0A0G2JLM5 398 aa11.96□□□□□ -0.49
NCKIPSD-201ENST00000294129 ANXA2RQ3ZCQ2 193 aa11.96□□□□□ -0.49
NCKIPSD-201ENST00000294129 DUX5Q96PT3 197 aa11.96□□□□□ -0.49
NCKIPSD-201ENST00000294129 SOCS3O14543 225 aa11.96□□□□□ -0.5
NCKIPSD-201ENST00000294129 GNRH2O43555 120 aa11.96□□□□□ -0.5
NCKIPSD-201ENST00000294129 CST9LQ9H4G1 147 aa11.96□□□□□ -0.5
NCKIPSD-201ENST00000294129 RNF223E7ERA6 249 aa11.95□□□□□ -0.5
NCKIPSD-201ENST00000294129 MGPP08493 103 aa11.95□□□□□ -0.5
NCKIPSD-201ENST00000294129 COX8AP10176 69 aa11.95□□□□□ -0.5
NCKIPSD-201ENST00000294129 C2orf91Q6ZV80 131 aa11.95□□□□□ -0.5
NCKIPSD-201ENST00000294129 C14orf178Q8N769 122 aaPredicted RBP11.95□□□□□ -0.5
NCKIPSD-201ENST00000294129 LINC00477Q96M19 166 aa11.95□□□□□ -0.5
NCKIPSD-201ENST00000294129 PEF1Q9UBV8 284 aaKnown RBP11.95□□□□□ -0.5
NCKIPSD-201ENST00000294129 IGLV1-40P01703 118 aa11.95□□□□□ -0.5
NCKIPSD-201ENST00000294129 BBC3Q96PG8 261 aaPredicted RBP11.95□□□□□ -0.5
NCKIPSD-201ENST00000294129 NXT2Q9NPJ8 142 aaKnown RBP11.95□□□□□ -0.5
NCKIPSD-201ENST00000294129 PHLDA3Q9Y5J5 127 aa11.95□□□□□ -0.5
NCKIPSD-201ENST00000294129 WNK1Q9H4A3 2382 aa11.95□□□□□ -0.5
NCKIPSD-201ENST00000294129 OVOL1O14753 267 aa11.94□□□□□ -0.5
NCKIPSD-201ENST00000294129 CD5LO43866 347 aa11.94□□□□□ -0.5
NCKIPSD-201ENST00000294129 LGALS9BQ3B8N2 356 aa11.94□□□□□ -0.5
NCKIPSD-201ENST00000294129 LGALS9CQ6DKI2 356 aa11.94□□□□□ -0.5
NCKIPSD-201ENST00000294129 TRAV21A0A0B4J279 112 aa11.94□□□□□ -0.5
NCKIPSD-201ENST00000294129 FOXC2Q99958 501 aa11.94□□□□□ -0.5
NCKIPSD-201ENST00000294129 VPS25Q9BRG1 176 aa11.94□□□□□ -0.5
NCKIPSD-201ENST00000294129 C7orf71A4D174 169 aa11.94□□□□□ -0.5
NCKIPSD-201ENST00000294129 H3BUA1 57 aa11.94□□□□□ -0.5
NCKIPSD-201ENST00000294129 FCER1GP30273 86 aa11.94□□□□□ -0.5
NCKIPSD-201ENST00000294129 ATP6V0BQ99437 205 aa11.94□□□□□ -0.5
NCKIPSD-201ENST00000294129 NOTCH3Q9UM47 2321 aa11.93□□□□□ -0.5
NCKIPSD-201ENST00000294129 ZNF688P0C7X2 276 aa11.93□□□□□ -0.5
NCKIPSD-201ENST00000294129 PCP2Q8IVA1 136 aa11.93□□□□□ -0.5
NCKIPSD-201ENST00000294129 LINC01356Q8N9X3 169 aa11.93□□□□□ -0.5
NCKIPSD-201ENST00000294129 COX6B1P14854 86 aa11.93□□□□□ -0.5
NCKIPSD-201ENST00000294129 OCIAD2Q56VL3 154 aa11.93□□□□□ -0.5
NCKIPSD-201ENST00000294129 TTTY13Q9BZ97 58 aa11.93□□□□□ -0.5
NCKIPSD-201ENST00000294129 SMPXQ9UHP9 88 aa11.93□□□□□ -0.5
NCKIPSD-201ENST00000294129 MUC4Q99102 2169 aa11.92□□□□□ -0.5
NCKIPSD-201ENST00000294129 ASIPP42127 132 aa11.92□□□□□ -0.5
NCKIPSD-201ENST00000294129 NRACQ8N912 160 aa11.92□□□□□ -0.5
NCKIPSD-201ENST00000294129 GAGE12BA1L429 117 aa11.92□□□□□ -0.5
NCKIPSD-201ENST00000294129 KRTAP10-9P60411 292 aa11.92□□□□□ -0.5
NCKIPSD-201ENST00000294129 Q8N8P6 123 aa11.92□□□□□ -0.5
NCKIPSD-201ENST00000294129 NAA38Q9BRA0 125 aaKnown RBP11.92□□□□□ -0.5
NCKIPSD-201ENST00000294129 SMIM17P0DL12 118 aa11.91□□□□□ -0.5
NCKIPSD-201ENST00000294129 TMEM97Q5BJF2 176 aa11.91□□□□□ -0.5
NCKIPSD-201ENST00000294129 RPL39LQ96EH5 51 aaKnown RBP11.91□□□□□ -0.5
NCKIPSD-201ENST00000294129 PRRC2AP48634 2157 aaKnown RBP11.91□□□□□ -0.5
NCKIPSD-201ENST00000294129 BEX4Q9NWD9 120 aaPredicted RBP11.91□□□□□ -0.5
NCKIPSD-201ENST00000294129 HIST2H2BDQ6DRA6 164 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms