RNA–Protein interactions for RNA: ENST00000293683.9

PDE4A-201, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-201ENST00000293683 TEX48A0A1B0GUV7 120 aa13.19□□□□□ -0.3
PDE4A-201ENST00000293683 M0R381 172 aa13.19□□□□□ -0.3
PDE4A-201ENST00000293683 UBE2E1P51965 193 aa13.19□□□□□ -0.3
PDE4A-201ENST00000293683 SPTAN1Q13813 2472 aaKnown RBP13.19□□□□□ -0.3
PDE4A-201ENST00000293683 HIVEP3Q5T1R4 2406 aa13.19□□□□□ -0.3
PDE4A-201ENST00000293683 IGHV3OR16-10A0A075B7F0 116 aa13.19□□□□□ -0.3
PDE4A-201ENST00000293683 CENPVL3A0A0U1RRI6 287 aa13.18□□□□□ -0.3
PDE4A-201ENST00000293683 RPL39LQ96EH5 51 aaKnown RBP13.18□□□□□ -0.3
PDE4A-201ENST00000293683 PRSS47A8MTI9 375 aa13.17□□□□□ -0.3
PDE4A-201ENST00000293683 TRBV12-3P01733 135 aa13.17□□□□□ -0.3
PDE4A-201ENST00000293683 SRSF1Q07955 248 aaKnown RBP eCLIP13.17□□□□□ -0.3
PDE4A-201ENST00000293683 SMIM2Q9BVW6 85 aa13.17□□□□□ -0.3
PDE4A-201ENST00000293683 U3KQE9 123 aa13.17□□□□□ -0.3
PDE4A-201ENST00000293683 UNQ9165/PRO28630Q6UXU0 137 aa13.17□□□□□ -0.3
PDE4A-201ENST00000293683 IGHV4-4A0A075B6R2 117 aa13.16□□□□□ -0.3
PDE4A-201ENST00000293683 KLK9Q2XQG4 91 aa13.16□□□□□ -0.3
PDE4A-201ENST00000293683 PSMG4Q5JS54 123 aa13.16□□□□□ -0.3
PDE4A-201ENST00000293683 KLK9Q9UKQ9 250 aa13.16□□□□□ -0.3
PDE4A-201ENST00000293683 TRBV7-1A0A0A6YYK4 115 aa13.16□□□□□ -0.3
PDE4A-201ENST00000293683 IGLL5B9A064 214 aa13.16□□□□□ -0.3
PDE4A-201ENST00000293683 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.16□□□□□ -0.3
PDE4A-201ENST00000293683 GPHB5Q86YW7 130 aa13.16□□□□□ -0.3
PDE4A-201ENST00000293683 MTURNQ8N3F0 131 aa13.16□□□□□ -0.3
PDE4A-201ENST00000293683 C5orf56Q8N8D9 126 aa13.16□□□□□ -0.3
PDE4A-201ENST00000293683 RASL10AQ92737 203 aa13.16□□□□□ -0.3
PDE4A-201ENST00000293683 SPTBN4Q9H254 2564 aa13.16□□□□□ -0.3
PDE4A-201ENST00000293683 ATP5G2Q06055 141 aa13.15□□□□□ -0.3
PDE4A-201ENST00000293683 AMTNQ6UX39 209 aa13.15□□□□□ -0.3
PDE4A-201ENST00000293683 C14orf178Q8N769 122 aaPredicted RBP13.15□□□□□ -0.3
PDE4A-201ENST00000293683 MRPL53Q96EL3 112 aaKnown RBP13.15□□□□□ -0.3
PDE4A-201ENST00000293683 HIST1H4GQ99525 98 aa13.15□□□□□ -0.3
PDE4A-201ENST00000293683 BPESC1Q9GZL8 116 aa13.15□□□□□ -0.3
PDE4A-201ENST00000293683 E9PLD3 99 aa13.15□□□□□ -0.3
PDE4A-201ENST00000293683 LCNL1Q6ZST4 164 aa13.15□□□□□ -0.3
PDE4A-201ENST00000293683 DEFB104AQ8WTQ1 72 aa13.15□□□□□ -0.3
PDE4A-201ENST00000293683 GLMPQ8WWB7 406 aa13.15□□□□□ -0.3
PDE4A-201ENST00000293683 HLA-DRB4P13762 266 aa13.14□□□□□ -0.31
PDE4A-201ENST00000293683 C12orf74Q32Q52 190 aa13.14□□□□□ -0.31
PDE4A-201ENST00000293683 ZFAND2AQ8N6M9 145 aa13.14□□□□□ -0.31
PDE4A-201ENST00000293683 ITLN2Q8WWU7 325 aaPredicted RBP13.14□□□□□ -0.31
PDE4A-201ENST00000293683 UBTD1Q9HAC8 227 aa13.14□□□□□ -0.31
PDE4A-201ENST00000293683 HIF1ANQ9NWT6 349 aa13.14□□□□□ -0.31
PDE4A-201ENST00000293683 HLA-DRB4X5D2U9 266 aa13.14□□□□□ -0.31
PDE4A-201ENST00000293683 ABCA2Q9BZC7 2435 aa13.14□□□□□ -0.31
PDE4A-201ENST00000293683 TMEM238C9JI98 176 aa13.14□□□□□ -0.31
PDE4A-201ENST00000293683 F6UB75 175 aa13.14□□□□□ -0.31
PDE4A-201ENST00000293683 PLNP26678 52 aa13.14□□□□□ -0.31
PDE4A-201ENST00000293683 WFDC2Q14508 124 aa13.14□□□□□ -0.31
PDE4A-201ENST00000293683 ZNF479Q96JC4 524 aa13.14□□□□□ -0.31
PDE4A-201ENST00000293683 RAXQ9Y2V3 346 aa13.14□□□□□ -0.31
PDE4A-201ENST00000293683 CHD8Q9HCK8 2581 aa13.14□□□□□ -0.31
PDE4A-201ENST00000293683 IGKV3-7A0A075B6H7 116 aa13.13□□□□□ -0.31
PDE4A-201ENST00000293683 F8VRH5 84 aa13.13□□□□□ -0.31
PDE4A-201ENST00000293683 H3BMG7 143 aa13.13□□□□□ -0.31
PDE4A-201ENST00000293683 NPFFO15130 113 aa13.13□□□□□ -0.31
PDE4A-201ENST00000293683 SCGB3A1Q96QR1 104 aa13.13□□□□□ -0.31
PDE4A-201ENST00000293683 SUMO2P61956 95 aaKnown RBP13.13□□□□□ -0.31
PDE4A-201ENST00000293683 MRAP2Q96G30 205 aa13.13□□□□□ -0.31
PDE4A-201ENST00000293683 H7C1H1 209 aa13.12□□□□□ -0.31
PDE4A-201ENST00000293683 MGPP08493 103 aa13.12□□□□□ -0.31
PDE4A-201ENST00000293683 LMO4P61968 165 aa13.12□□□□□ -0.31
PDE4A-201ENST00000293683 CHTOPQ9Y3Y2 248 aaKnown RBP13.12□□□□□ -0.31
PDE4A-201ENST00000293683 TRAV41A0A0B4J266 112 aa13.12□□□□□ -0.31
PDE4A-201ENST00000293683 RNF223E7ERA6 249 aa13.12□□□□□ -0.31
PDE4A-201ENST00000293683 TRBV7-3A0A075B6L6 115 aa13.11□□□□□ -0.31
PDE4A-201ENST00000293683 S100A4P26447 101 aaKnown RBP13.11□□□□□ -0.31
PDE4A-201ENST00000293683 ARL3P36405 182 aa13.11□□□□□ -0.31
PDE4A-201ENST00000293683 ANXA2RQ3ZCQ2 193 aa13.11□□□□□ -0.31
PDE4A-201ENST00000293683 FOXI2Q6ZQN5 318 aa13.11□□□□□ -0.31
PDE4A-201ENST00000293683 C9orf139Q6ZV77 190 aa13.11□□□□□ -0.31
PDE4A-201ENST00000293683 NCOR2Q9Y618 2525 aa13.11□□□□□ -0.31
PDE4A-201ENST00000293683 NEXN-AS1Q8NBZ9 246 aa13.11□□□□□ -0.31
PDE4A-201ENST00000293683 CYSLTR1Q9Y271 337 aa13.11□□□□□ -0.31
PDE4A-201ENST00000293683 OR11H12B2RN74 326 aa13.1□□□□□ -0.31
PDE4A-201ENST00000293683 GNRH2O43555 120 aa13.1□□□□□ -0.31
PDE4A-201ENST00000293683 BRD3OSQ6XYD6 125 aa13.1□□□□□ -0.31
PDE4A-201ENST00000293683 SH2D6Q7Z4S9 175 aa13.1□□□□□ -0.31
PDE4A-201ENST00000293683 OR11H1Q8NG94 326 aa13.1□□□□□ -0.31
PDE4A-201ENST00000293683 OR11H2Q8NH07 326 aa13.1□□□□□ -0.31
PDE4A-201ENST00000293683 TOMM6Q96B49 74 aa13.1□□□□□ -0.31
PDE4A-201ENST00000293683 TRAV12-1A0A0B4J245 112 aa13.1□□□□□ -0.31
PDE4A-201ENST00000293683 IGHV3-11P01762 117 aa13.1□□□□□ -0.31
PDE4A-201ENST00000293683 RNASE4P34096 147 aaKnown RBP13.1□□□□□ -0.31
PDE4A-201ENST00000293683 PHLDA3Q9Y5J5 127 aa13.1□□□□□ -0.31
PDE4A-201ENST00000293683 MYMXA0A1B0GTQ4 84 aa13.09□□□□□ -0.31
PDE4A-201ENST00000293683 RPL11P62913 178 aaKnown RBP13.09□□□□□ -0.31
PDE4A-201ENST00000293683 C2orf66Q6UXQ4 117 aa13.09□□□□□ -0.31
PDE4A-201ENST00000293683 BAALCQ8WXS3 180 aa13.09□□□□□ -0.31
PDE4A-201ENST00000293683 ORMDL2Q53FV1 153 aa13.09□□□□□ -0.31
PDE4A-201ENST00000293683 MUC4Q99102 2169 aa13.08□□□□□ -0.32
PDE4A-201ENST00000293683 SOCS3O14543 225 aa13.08□□□□□ -0.32
PDE4A-201ENST00000293683 ASIPP42127 132 aa13.08□□□□□ -0.32
PDE4A-201ENST00000293683 KLRB1Q12918 225 aa13.08□□□□□ -0.32
PDE4A-201ENST00000293683 C19orf54Q5BKX5 351 aa13.08□□□□□ -0.32
PDE4A-201ENST00000293683 OR10J6PQ8NGY7 276 aa13.08□□□□□ -0.32
PDE4A-201ENST00000293683 DPH3P1Q9H4G8 78 aa13.08□□□□□ -0.32
PDE4A-201ENST00000293683 SPANXB1Q9NS25 103 aaPredicted RBP13.08□□□□□ -0.32
PDE4A-201ENST00000293683 TRAV21A0A0B4J279 112 aa13.08□□□□□ -0.32
PDE4A-201ENST00000293683 LGALS1P09382 135 aaKnown RBP13.08□□□□□ -0.32
PDE4A-201ENST00000293683 TAL2Q16559 108 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms