RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 IGKV2D-40P01614 121 aaPredicted RBP3.5□□□□□ -1.85
NCOA1-201ENST00000288599 TFF1P04155 84 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 PYYP10082 97 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 CRYBA4P53673 196 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 NANOS3P60323 173 aaKnown RBP3.5□□□□□ -1.85
NCOA1-201ENST00000288599 IFI27L1Q96BM0 104 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 SDK2Q58EX2 2172 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 MTCL1Q9Y4B5 1905 aaKnown RBP3.5□□□□□ -1.85
NCOA1-201ENST00000288599 IGHV1OR15-1A0A075B7D0 117 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 DKK1O94907 266 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 IGLV2-14P01704 120 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 CELA2AP08217 269 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 H2BFSP57053 126 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 WIPF2Q8TF74 440 aaPredicted RBP3.5□□□□□ -1.85
NCOA1-201ENST00000288599 SCN2AQ99250 2005 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 CASP8AP2Q9UKL3 1982 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 IGHV4-30-2A0A087WSY4 118 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 TRAV4A0A0B4J268 109 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 DLEU1O43261 78 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 IGLV2-8P01709 118 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 DANCRP0C864 163 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 GATA1P15976 413 aaPredicted RBP3.5□□□□□ -1.85
NCOA1-201ENST00000288599 RPL28P46779 137 aaKnown RBP3.5□□□□□ -1.85
NCOA1-201ENST00000288599 IGFL4Q6B9Z1 124 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 PTPRSQ13332 1948 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 C5orf63A6NC05 138 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 IGKV1-17P01599 117 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 NDUFA11Q86Y39 141 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 PPP1R3EQ9H7J1 279 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 ESM1Q9NQ30 184 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 SMPXQ9UHP9 88 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 BRWD1Q9NSI6 2320 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 EP300Q09472 2414 aaPredicted RBP3.5□□□□□ -1.85
NCOA1-201ENST00000288599 SCN3AQ9NY46 2000 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 IGKV1-27A0A075B6S5 117 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 IGF1P05019 195 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 FAM222AQ5U5X8 452 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 PRR25Q96S07 402 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 ARID1AO14497 2285 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 NUP210Q8TEM1 1887 aaPredicted RBP3.5□□□□□ -1.85
NCOA1-201ENST00000288599 IGHV2-26A0A0B4J1V2 119 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 IGHV3-38A0A0C4DH36 116 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 SLPIP03973 132 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 CIRBP-AS1Q8TBR5 109 aa3.5□□□□□ -1.85
NCOA1-201ENST00000288599 IGKV1D-17A0A075B6S4 117 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 A0A1W2PRE2 83 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 IGLV2-11P01706 119 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 TDRG1Q3Y452 100 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 Q8N976 141 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 HIST1H2BLQ99880 126 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 C5orf66Q9H5L9 145 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 INAFM1C9JVW0 142 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 CD55P08174 381 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 C9orf106Q8NAJ2 232 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 PSG8Q9UQ74 426 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 IGKV1D-8A0A087WSZ0 117 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 COX6A1P12074 109 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 SRSF2Q01130 221 aaKnown RBP3.49□□□□□ -1.85
NCOA1-201ENST00000288599 COX7B2Q8TF08 81 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 KLK12Q9UKR0 248 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 MUC22E2RYF6 1773 aaPredicted RBP3.49□□□□□ -1.85
NCOA1-201ENST00000288599 A0A0G2JNJ9 132 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 K7EMT4 169 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 SH2D1AO60880 128 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 EXOC3-AS1Q8N2X6 119 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 LINC00311Q8N616 119 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 FAM60AQ9NP50 221 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 Q9UFV3 132 aa3.49□□□□□ -1.85
NCOA1-201ENST00000288599 MYO7AQ13402 2215 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 IGLV9-49A0A0B4J1Y8 123 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 CRYGSP22914 178 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 ZNF501Q96CX3 271 aaPredicted RBP3.48□□□□□ -1.85
NCOA1-201ENST00000288599 OPRPNQ99935 248 aaPredicted RBP3.48□□□□□ -1.85
NCOA1-201ENST00000288599 NBEAQ8NFP9 2946 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 TGFBR3LH3BV60 316 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 K7ERJ3 54 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 YPEL1O60688 119 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 LINC00271P0C7V0 271 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 MED14OSP0DP75 135 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 LINC01555Q8NAE3 123 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 CXCL5P42830 114 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 UBE2V1Q13404 147 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 TREML4Q6UXN2 200 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 C14orf178Q8N769 122 aaPredicted RBP3.48□□□□□ -1.85
NCOA1-201ENST00000288599 PRSS33Q8NF86 280 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 LTBP2Q14767 1821 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 CENPVL1A0A0U1RR11 272 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 A0A1W2PR77 199 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 M0R2T5 61 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 SRP19P09132 144 aaKnown RBP3.48□□□□□ -1.85
NCOA1-201ENST00000288599 IL15RAQ13261 267 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 CARD19Q96LW7 228 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 HHLA3Q9XRX5 114 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 POLR3KQ9Y2Y1 108 aaPredicted RBP3.48□□□□□ -1.85
NCOA1-201ENST00000288599 LYPD3O95274 346 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 AMELYQ99218 206 aa3.48□□□□□ -1.85
NCOA1-201ENST00000288599 KIAA0100Q14667 2235 aaKnown RBP3.48□□□□□ -1.85
NCOA1-201ENST00000288599 K7EMI3 77 aa3.47□□□□□ -1.85
NCOA1-201ENST00000288599 SIVA1O15304 175 aa3.47□□□□□ -1.85
NCOA1-201ENST00000288599 NHLRC4P0CG21 123 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms