RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 C2orf70A6NJV1 201 aa15.71■□□□□ 0.11
YBX3-202ENST00000279550 ZNF324O75467 553 aaPredicted RBP15.71■□□□□ 0.11
YBX3-202ENST00000279550 TFPI2P48307 235 aa15.71■□□□□ 0.11
YBX3-202ENST00000279550 AMTP48728 403 aa15.71■□□□□ 0.11
YBX3-202ENST00000279550 KRTAP10-3P60369 221 aa15.71■□□□□ 0.11
YBX3-202ENST00000279550 S100A12P80511 92 aa15.71■□□□□ 0.11
YBX3-202ENST00000279550 DPF1Q92782 380 aa15.71■□□□□ 0.11
YBX3-202ENST00000279550 DUX3Q96PT4 197 aa15.71■□□□□ 0.11
YBX3-202ENST00000279550 RNASEKQ6P5S7 137 aaKnown RBP15.71■□□□□ 0.1
YBX3-202ENST00000279550 NIT1Q86X76 327 aa15.71■□□□□ 0.1
YBX3-202ENST00000279550 MSRB1Q9NZV6 116 aa15.71■□□□□ 0.1
YBX3-202ENST00000279550 ID1P41134 155 aa15.7■□□□□ 0.1
YBX3-202ENST00000279550 SETD2Q9BYW2 2564 aaPredicted RBP15.7■□□□□ 0.1
YBX3-202ENST00000279550 KIR3DS1Q14943 382 aa15.69■□□□□ 0.1
YBX3-202ENST00000279550 RAX2Q96IS3 184 aa15.69■□□□□ 0.1
YBX3-202ENST00000279550 JMJD1CQ15652 2540 aa15.69■□□□□ 0.1
YBX3-202ENST00000279550 K7EQG2 157 aa15.68■□□□□ 0.1
YBX3-202ENST00000279550 NTF3P20783 257 aa15.68■□□□□ 0.1
YBX3-202ENST00000279550 TWIST1Q15672 202 aa15.68■□□□□ 0.1
YBX3-202ENST00000279550 AMN1Q8IY45 258 aa15.68■□□□□ 0.1
YBX3-202ENST00000279550 ADARB2-AS1A8MUL3 147 aa15.68■□□□□ 0.1
YBX3-202ENST00000279550 SCGB1D1O95968 90 aa15.68■□□□□ 0.1
YBX3-202ENST00000279550 FHL3Q13643 280 aa15.68■□□□□ 0.1
YBX3-202ENST00000279550 FAM104BQ5XKR9 115 aa15.68■□□□□ 0.1
YBX3-202ENST00000279550 CNFNQ9BYD5 112 aa15.68■□□□□ 0.1
YBX3-202ENST00000279550 LINC00587B1AMM8 73 aa15.67■□□□□ 0.1
YBX3-202ENST00000279550 CCL24O00175 119 aa15.67■□□□□ 0.1
YBX3-202ENST00000279550 ZNF688P0C7X2 276 aa15.67■□□□□ 0.1
YBX3-202ENST00000279550 NAGKQ9UJ70 344 aa15.67■□□□□ 0.1
YBX3-202ENST00000279550 SAMD13Q5VXD3 122 aa15.66■□□□□ 0.1
YBX3-202ENST00000279550 PRIMA1Q86XR5 153 aa15.66■□□□□ 0.1
YBX3-202ENST00000279550 NDUFA11Q86Y39 141 aa15.66■□□□□ 0.1
YBX3-202ENST00000279550 HSBP1O75506 76 aa15.65■□□□□ 0.1
YBX3-202ENST00000279550 RNASE4P34096 147 aaKnown RBP15.65■□□□□ 0.1
YBX3-202ENST00000279550 MRPL51Q4U2R6 128 aaKnown RBP15.65■□□□□ 0.1
YBX3-202ENST00000279550 PSMG4Q5JS54 123 aa15.65■□□□□ 0.1
YBX3-202ENST00000279550 APRG1Q8IVJ8 170 aa15.65■□□□□ 0.1
YBX3-202ENST00000279550 DLX4Q92988 240 aaPredicted RBP15.65■□□□□ 0.1
YBX3-202ENST00000279550 U3KQK5 164 aa15.65■□□□□ 0.1
YBX3-202ENST00000279550 NSUN5P1Q3KNT7 163 aa15.65■□□□□ 0.1
YBX3-202ENST00000279550 KRTAP24-1Q3LI83 254 aa15.65■□□□□ 0.1
YBX3-202ENST00000279550 PRO1933Q9H354 126 aa15.65■□□□□ 0.1
YBX3-202ENST00000279550 OR10AG1Q8NH19 301 aa15.64■□□□□ 0.09
YBX3-202ENST00000279550 TRAV21A0A0B4J279 112 aa15.63■□□□□ 0.09
YBX3-202ENST00000279550 D6R8Y8 96 aa15.63■□□□□ 0.09
YBX3-202ENST00000279550 CSN3P07498 182 aa15.63■□□□□ 0.09
YBX3-202ENST00000279550 KRTDAPP60985 99 aa15.63■□□□□ 0.09
YBX3-202ENST00000279550 Q8N976 141 aa15.63■□□□□ 0.09
YBX3-202ENST00000279550 OR9G4Q8NGQ1 327 aa15.63■□□□□ 0.09
YBX3-202ENST00000279550 TRBV7-9A0A0J9YWB2 115 aa15.63■□□□□ 0.09
YBX3-202ENST00000279550 SMKR1H3BMG3 65 aa15.63■□□□□ 0.09
YBX3-202ENST00000279550 M0R2Z0 102 aa15.63■□□□□ 0.09
YBX3-202ENST00000279550 PMCHL1Q16048 86 aa15.63■□□□□ 0.09
YBX3-202ENST00000279550 RNF185Q96GF1 192 aa15.63■□□□□ 0.09
YBX3-202ENST00000279550 TMEM191AQ9H0A3 160 aa15.63■□□□□ 0.09
YBX3-202ENST00000279550 PEMTQ9UBM1 199 aa15.63■□□□□ 0.09
YBX3-202ENST00000279550 DMRTA1Q5VZB9 504 aa15.62■□□□□ 0.09
YBX3-202ENST00000279550 CHCHD1Q96BP2 118 aaKnown RBP15.62■□□□□ 0.09
YBX3-202ENST00000279550 A0A0J9YX75 114 aa15.61■□□□□ 0.09
YBX3-202ENST00000279550 H3BVH4 76 aa15.61■□□□□ 0.09
YBX3-202ENST00000279550 SNAI2O43623 268 aa15.61■□□□□ 0.09
YBX3-202ENST00000279550 C3orf79P0CE67 100 aa15.61■□□□□ 0.09
YBX3-202ENST00000279550 ANXA2RQ3ZCQ2 193 aa15.61■□□□□ 0.09
YBX3-202ENST00000279550 ZNF664Q8N3J9 261 aa15.61■□□□□ 0.09
YBX3-202ENST00000279550 KLLNB2CW77 178 aa15.6■□□□□ 0.09
YBX3-202ENST00000279550 LINC00614P0C842 121 aa15.6■□□□□ 0.09
YBX3-202ENST00000279550 SNRPD3P62318 126 aaKnown RBP15.6■□□□□ 0.09
YBX3-202ENST00000279550 PRELID3AQ96N28 172 aa15.6■□□□□ 0.09
YBX3-202ENST00000279550 CITED1Q99966 193 aa15.6■□□□□ 0.09
YBX3-202ENST00000279550 IGHV1-24A0A0C4DH33 117 aa15.6■□□□□ 0.09
YBX3-202ENST00000279550 SPRY2O43597 315 aa15.6■□□□□ 0.09
YBX3-202ENST00000279550 NCR2O95944 276 aa15.6■□□□□ 0.09
YBX3-202ENST00000279550 OR5AL1P0C617 328 aa15.6■□□□□ 0.09
YBX3-202ENST00000279550 PKIAP61925 76 aa15.6■□□□□ 0.09
YBX3-202ENST00000279550 RAB4AP20338 218 aa15.59■□□□□ 0.09
YBX3-202ENST00000279550 EBLN2Q6P2I7 272 aa15.59■□□□□ 0.09
YBX3-202ENST00000279550 TIMM8BQ9Y5J9 83 aaPredicted RBP15.59■□□□□ 0.09
YBX3-202ENST00000279550 GAS8-AS1O95177 125 aa15.58■□□□□ 0.08
YBX3-202ENST00000279550 ORMDL3Q8N138 153 aa15.58■□□□□ 0.08
YBX3-202ENST00000279550 NPYP01303 97 aa15.57■□□□□ 0.08
YBX3-202ENST00000279550 IGKV3-20P01619 116 aa15.57■□□□□ 0.08
YBX3-202ENST00000279550 LINC00173Q6ZV60 143 aa15.57■□□□□ 0.08
YBX3-202ENST00000279550 IGHV4-4A0A075B6R2 117 aa15.57■□□□□ 0.08
YBX3-202ENST00000279550 GNRH2O43555 120 aa15.57■□□□□ 0.08
YBX3-202ENST00000279550 CKS2P33552 79 aa15.57■□□□□ 0.08
YBX3-202ENST00000279550 TEX43Q6ZNM6 134 aa15.57■□□□□ 0.08
YBX3-202ENST00000279550 TDRG1Q3Y452 100 aa15.56■□□□□ 0.08
YBX3-202ENST00000279550 SIGLEC8Q9NYZ4 499 aa15.56■□□□□ 0.08
YBX3-202ENST00000279550 LOC389332A0A1B0GUA5 103 aa15.55■□□□□ 0.08
YBX3-202ENST00000279550 EVI2AP22794 236 aa15.55■□□□□ 0.08
YBX3-202ENST00000279550 IFI27P40305 119 aaPredicted RBP15.55■□□□□ 0.08
YBX3-202ENST00000279550 LEPP41159 167 aa15.55■□□□□ 0.08
YBX3-202ENST00000279550 ASIPP42127 132 aa15.55■□□□□ 0.08
YBX3-202ENST00000279550 CACNG7P62955 275 aa15.55■□□□□ 0.08
YBX3-202ENST00000279550 TMEM61Q8N0U2 210 aa15.55■□□□□ 0.08
YBX3-202ENST00000279550 ODF3Q96PU9 254 aa15.55■□□□□ 0.08
YBX3-202ENST00000279550 FBN1P35555 2871 aaKnown RBP15.55■□□□□ 0.08
YBX3-202ENST00000279550 SPANXN1Q5VSR9 72 aa15.54■□□□□ 0.08
YBX3-202ENST00000279550 PRSS3P2Q8NHM4 247 aa15.54■□□□□ 0.08
YBX3-202ENST00000279550 TRAV12-3A0A0B4J271 114 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms