RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 TANC1Q9C0D5 1861 aa9.34□□□□□ -0.91
SHPRH-201ENST00000275233 RS1O15537 224 aa9.34□□□□□ -0.91
SHPRH-201ENST00000275233 DLEU1O43261 78 aa9.34□□□□□ -0.91
SHPRH-201ENST00000275233 NCKAP5O14513 1909 aa9.33□□□□□ -0.92
SHPRH-201ENST00000275233 ETV2O00321 342 aaPredicted RBP9.33□□□□□ -0.92
SHPRH-201ENST00000275233 DSCR8Q96T75 97 aa9.33□□□□□ -0.92
SHPRH-201ENST00000275233 DEFB4AO15263 64 aa9.33□□□□□ -0.92
SHPRH-201ENST00000275233 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.33□□□□□ -0.924e-7■■■□□ 17.6
SHPRH-201ENST00000275233 K7ERJ3 54 aa9.33□□□□□ -0.92
SHPRH-201ENST00000275233 Q0VG73 95 aa9.33□□□□□ -0.92
SHPRH-201ENST00000275233 CD5LO43866 347 aa9.33□□□□□ -0.92
SHPRH-201ENST00000275233 C5orf38Q86SI9 138 aa9.33□□□□□ -0.92
SHPRH-201ENST00000275233 RHOHQ15669 191 aa9.33□□□□□ -0.92
SHPRH-201ENST00000275233 C9orf66Q5T8R8 295 aa9.33□□□□□ -0.92
SHPRH-201ENST00000275233 ZGRF1Q86YA3 2104 aa9.33□□□□□ -0.92
SHPRH-201ENST00000275233 CENPVL3A0A0U1RRI6 287 aa9.32□□□□□ -0.92
SHPRH-201ENST00000275233 NOTCH4Q99466 2003 aa9.32□□□□□ -0.92
SHPRH-201ENST00000275233 UBE2V1Q13404 147 aa9.32□□□□□ -0.92
SHPRH-201ENST00000275233 BUB3O43684 328 aa9.32□□□□□ -0.92
SHPRH-201ENST00000275233 EGR2P11161 476 aaPredicted RBP9.32□□□□□ -0.92
SHPRH-201ENST00000275233 HERVK_113P63121 156 aa9.32□□□□□ -0.92
SHPRH-201ENST00000275233 SLX1AQ9BQ83 275 aa9.32□□□□□ -0.92
SHPRH-201ENST00000275233 SMIM2Q9BVW6 85 aa9.32□□□□□ -0.92
SHPRH-201ENST00000275233 DKK2Q9UBU2 259 aa9.32□□□□□ -0.92
SHPRH-201ENST00000275233 RIF1Q5UIP0 2472 aaKnown RBP9.31□□□□□ -0.92
SHPRH-201ENST00000275233 GYPEP15421 78 aa9.31□□□□□ -0.92
SHPRH-201ENST00000275233 GATA1P15976 413 aaPredicted RBP9.31□□□□□ -0.92
SHPRH-201ENST00000275233 CT83Q5H943 113 aa9.31□□□□□ -0.92
SHPRH-201ENST00000275233 A8MWP6 167 aa9.31□□□□□ -0.92
SHPRH-201ENST00000275233 C11orf53Q8IXP5 236 aa9.31□□□□□ -0.92
SHPRH-201ENST00000275233 ADAMTS9Q9P2N4 1935 aa9.31□□□□□ -0.92
SHPRH-201ENST00000275233 NCOR1P1Q9H4R4 102 aa9.31□□□□□ -0.92
SHPRH-201ENST00000275233 IGLC7A0M8Q6 106 aa9.31□□□□□ -0.92
SHPRH-201ENST00000275233 AJUBAQ96IF1 538 aa9.31□□□□□ -0.92
SHPRH-201ENST00000275233 NDUFS6O75380 124 aaKnown RBP9.31□□□□□ -0.92
SHPRH-201ENST00000275233 WIPF2Q8TF74 440 aaPredicted RBP9.31□□□□□ -0.92
SHPRH-201ENST00000275233 K7EN84 100 aa9.3□□□□□ -0.92
SHPRH-201ENST00000275233 AGPAT4-IT1Q9H0P7 198 aa9.3□□□□□ -0.92
SHPRH-201ENST00000275233 COX11Q9Y6N1 276 aa9.3□□□□□ -0.92
SHPRH-201ENST00000275233 PCNX1Q96RV3 2341 aa9.3□□□□□ -0.92
SHPRH-201ENST00000275233 EML6Q6ZMW3 1958 aa9.3□□□□□ -0.92
SHPRH-201ENST00000275233 F8W735 103 aaPredicted RBP9.3□□□□□ -0.92
SHPRH-201ENST00000275233 Q6ZWC4 215 aa9.3□□□□□ -0.92
SHPRH-201ENST00000275233 ADORA2A-AS1P86434 159 aa9.3□□□□□ -0.92
SHPRH-201ENST00000275233 KAAG1Q9UBP8 84 aa9.3□□□□□ -0.92
SHPRH-201ENST00000275233 IGHV4OR15-8A0A075B7B6 117 aa9.3□□□□□ -0.92
SHPRH-201ENST00000275233 A0A087WW49 117 aa9.3□□□□□ -0.92
SHPRH-201ENST00000275233 RPL39LQ96EH5 51 aaKnown RBP9.3□□□□□ -0.92
SHPRH-201ENST00000275233 IGHG4P01861 327 aa9.29□□□□□ -0.92
SHPRH-201ENST00000275233 C1orf43Q9BWL3 253 aa9.29□□□□□ -0.92
SHPRH-201ENST00000275233 J3QQQ9 107 aa9.29□□□□□ -0.92
SHPRH-201ENST00000275233 ZNF124Q15973 351 aa9.29□□□□□ -0.92
SHPRH-201ENST00000275233 MAJINQ3KP22 176 aa9.29□□□□□ -0.92
SHPRH-201ENST00000275233 CEND1Q8N111 149 aa9.29□□□□□ -0.92
SHPRH-201ENST00000275233 NACAE9PAV3 2078 aa9.29□□□□□ -0.92
SHPRH-201ENST00000275233 BOD1L2Q8IYS8 172 aa9.29□□□□□ -0.92
SHPRH-201ENST00000275233 IGHV4-28A0A0C4DH34 117 aa9.28□□□□□ -0.92
SHPRH-201ENST00000275233 UBL5Q9BZL1 73 aa9.28□□□□□ -0.92
SHPRH-201ENST00000275233 LTAP01374 205 aa9.28□□□□□ -0.92
SHPRH-201ENST00000275233 IGHV7-81A0A0B4J1V7 117 aa9.28□□□□□ -0.92
SHPRH-201ENST00000275233 H3BUA1 57 aa9.28□□□□□ -0.92
SHPRH-201ENST00000275233 CFPP27918 469 aa9.28□□□□□ -0.92
SHPRH-201ENST00000275233 FGF23Q9GZV9 251 aaPredicted RBP9.28□□□□□ -0.92
SHPRH-201ENST00000275233 Q9H8V8 135 aa9.28□□□□□ -0.92
SHPRH-201ENST00000275233 CARD19Q96LW7 228 aa9.28□□□□□ -0.92
SHPRH-201ENST00000275233 TRAV13-2A0A0B4J235 113 aa9.27□□□□□ -0.92
SHPRH-201ENST00000275233 TIMM17AQ99595 171 aa9.27□□□□□ -0.92
SHPRH-201ENST00000275233 PYGO2Q9BRQ0 406 aa9.27□□□□□ -0.93
SHPRH-201ENST00000275233 F8VRH5 84 aa9.27□□□□□ -0.93
SHPRH-201ENST00000275233 IGLL1P15814 213 aa9.27□□□□□ -0.93
SHPRH-201ENST00000275233 DENND4CQ5VZ89 1909 aa9.27□□□□□ -0.93
SHPRH-201ENST00000275233 C9orf153Q5TBE3 101 aa9.27□□□□□ -0.93
SHPRH-201ENST00000275233 OR11H6Q8NGC7 330 aa9.27□□□□□ -0.93
SHPRH-201ENST00000275233 ICOSQ9Y6W8 199 aa9.26□□□□□ -0.93
SHPRH-201ENST00000275233 PRO1854Q9UHT4 67 aa9.26□□□□□ -0.93
SHPRH-201ENST00000275233 KLF2Q9Y5W3 355 aaPredicted RBP9.26□□□□□ -0.93
SHPRH-201ENST00000275233 CCL18P55774 89 aa9.26□□□□□ -0.93
SHPRH-201ENST00000275233 DEFB1P60022 68 aa9.26□□□□□ -0.93
SHPRH-201ENST00000275233 C9orf118A6NHY6 69 aa9.26□□□□□ -0.93
SHPRH-201ENST00000275233 LGALS9BQ3B8N2 356 aa9.26□□□□□ -0.93
SHPRH-201ENST00000275233 LGALS9CQ6DKI2 356 aa9.26□□□□□ -0.93
SHPRH-201ENST00000275233 FAM231DQ6ZW35 169 aa9.26□□□□□ -0.93
SHPRH-201ENST00000275233 TRAV4A0A0B4J268 109 aa9.26□□□□□ -0.93
SHPRH-201ENST00000275233 CAMK2N2Q96S95 79 aa9.26□□□□□ -0.93
SHPRH-201ENST00000275233 NUP210Q8TEM1 1887 aaPredicted RBP9.26□□□□□ -0.93
SHPRH-201ENST00000275233 NBASA2RRP1 2371 aa9.25□□□□□ -0.93
SHPRH-201ENST00000275233 PRB2P02812 416 aaPredicted RBP9.25□□□□□ -0.93
SHPRH-201ENST00000275233 SPART-AS1P0CW21 52 aa9.25□□□□□ -0.93
SHPRH-201ENST00000275233 INAFM2P0DMQ5 153 aa9.25□□□□□ -0.93
SHPRH-201ENST00000275233 NPBQ8NG41 125 aa9.25□□□□□ -0.93
SHPRH-201ENST00000275233 ZNF503Q96F45 646 aa9.25□□□□□ -0.93
SHPRH-201ENST00000275233 C16orf74Q96GX8 76 aa9.25□□□□□ -0.93
SHPRH-201ENST00000275233 K7EQD1 137 aa9.25□□□□□ -0.93
SHPRH-201ENST00000275233 ZFP36P26651 326 aaKnown RBP9.25□□□□□ -0.93
SHPRH-201ENST00000275233 TIRAPP58753 221 aa9.25□□□□□ -0.93
SHPRH-201ENST00000275233 COX8AP10176 69 aa9.25□□□□□ -0.93
SHPRH-201ENST00000275233 DEFB135Q30KP9 77 aa9.25□□□□□ -0.93
SHPRH-201ENST00000275233 PROP1O75360 226 aa9.25□□□□□ -0.93
SHPRH-201ENST00000275233 IGLV3-1P01715 115 aa9.25□□□□□ -0.93
SHPRH-201ENST00000275233 AMTNQ6UX39 209 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms