RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 METTL26Q96S19 204 aa13.36□□□□□ -0.27
TRAM1-201ENST00000262213 CYSLTR1Q9Y271 337 aa13.36□□□□□ -0.27
TRAM1-201ENST00000262213 SFTA2Q6UW10 78 aa13.35□□□□□ -0.27
TRAM1-201ENST00000262213 SCGB3A1Q96QR1 104 aa13.35□□□□□ -0.27
TRAM1-201ENST00000262213 RPL39LQ96EH5 51 aaKnown RBP13.35□□□□□ -0.27
TRAM1-201ENST00000262213 MGPP08493 103 aa13.34□□□□□ -0.27
TRAM1-201ENST00000262213 RAB9AP51151 201 aa13.34□□□□□ -0.27
TRAM1-201ENST00000262213 SMIM2Q9BVW6 85 aa13.34□□□□□ -0.27
TRAM1-201ENST00000262213 SPANXB1Q9NS25 103 aaPredicted RBP13.34□□□□□ -0.27
TRAM1-201ENST00000262213 CHTOPQ9Y3Y2 248 aaKnown RBP13.34□□□□□ -0.27
TRAM1-201ENST00000262213 OR11H12B2RN74 326 aa13.33□□□□□ -0.27
TRAM1-201ENST00000262213 PLNP26678 52 aa13.33□□□□□ -0.27
TRAM1-201ENST00000262213 SCGB2A2Q13296 93 aa13.33□□□□□ -0.27
TRAM1-201ENST00000262213 EBI3Q14213 229 aa13.33□□□□□ -0.27
TRAM1-201ENST00000262213 C14orf178Q8N769 122 aaPredicted RBP13.33□□□□□ -0.27
TRAM1-201ENST00000262213 OR11H1Q8NG94 326 aa13.33□□□□□ -0.27
TRAM1-201ENST00000262213 OR11H2Q8NH07 326 aa13.33□□□□□ -0.27
TRAM1-201ENST00000262213 IGKV3-7A0A075B6H7 116 aa13.33□□□□□ -0.28
TRAM1-201ENST00000262213 H7C1H1 209 aa13.33□□□□□ -0.28
TRAM1-201ENST00000262213 S100A4P26447 101 aaKnown RBP13.32□□□□□ -0.28
TRAM1-201ENST00000262213 F8VRH5 84 aa13.32□□□□□ -0.28
TRAM1-201ENST00000262213 TMEM219Q86XT9 240 aa13.32□□□□□ -0.28
TRAM1-201ENST00000262213 C20orf173Q96LM9 149 aa13.32□□□□□ -0.28
TRAM1-201ENST00000262213 MINOS1Q5TGZ0 78 aa13.32□□□□□ -0.28
TRAM1-201ENST00000262213 GLMPQ8WWB7 406 aa13.32□□□□□ -0.28
TRAM1-201ENST00000262213 EEF1AKMT3Q96AZ1 226 aa13.32□□□□□ -0.28
TRAM1-201ENST00000262213 SIGMAR1Q99720 223 aa13.32□□□□□ -0.28
TRAM1-201ENST00000262213 MINOS1-NBL1R4GNA1 71 aa13.32□□□□□ -0.28
TRAM1-201ENST00000262213 INSL3P51460 131 aa13.31□□□□□ -0.28
TRAM1-201ENST00000262213 IGHV3OR16-10A0A075B7F0 116 aa13.31□□□□□ -0.28
TRAM1-201ENST00000262213 MYMXA0A1B0GTQ4 84 aa13.31□□□□□ -0.28
TRAM1-201ENST00000262213 F8W1H4 67 aa13.31□□□□□ -0.28
TRAM1-201ENST00000262213 SAA4P35542 130 aa13.31□□□□□ -0.28
TRAM1-201ENST00000262213 FOXC1Q12948 553 aa13.31□□□□□ -0.28
TRAM1-201ENST00000262213 GAGE12HA6NDE8 117 aa13.3□□□□□ -0.28
TRAM1-201ENST00000262213 OOSP1A8MZH6 123 aa13.3□□□□□ -0.28
TRAM1-201ENST00000262213 RRN3P1Q2M238 152 aa13.3□□□□□ -0.28
TRAM1-201ENST00000262213 GAGE13Q4V321 117 aa13.3□□□□□ -0.28
TRAM1-201ENST00000262213 SPAG8Q99932 426 aaPredicted RBP13.3□□□□□ -0.28
TRAM1-201ENST00000262213 TRBV7-3A0A075B6L6 115 aa13.3□□□□□ -0.28
TRAM1-201ENST00000262213 EMP1P54849 157 aa13.3□□□□□ -0.28
TRAM1-201ENST00000262213 SUMO2P61956 95 aaKnown RBP13.3□□□□□ -0.28
TRAM1-201ENST00000262213 C9orf47Q6ZRZ4 202 aa13.3□□□□□ -0.28
TRAM1-201ENST00000262213 RASL10AQ92737 203 aa13.3□□□□□ -0.28
TRAM1-201ENST00000262213 RAXQ9Y2V3 346 aa13.3□□□□□ -0.28
TRAM1-201ENST00000262213 IGF2RP11717 2491 aa13.29□□□□□ -0.28
TRAM1-201ENST00000262213 RPL11P62913 178 aaKnown RBP13.29□□□□□ -0.28
TRAM1-201ENST00000262213 ZFHX3Q15911 3703 aa13.29□□□□□ -0.28
TRAM1-201ENST00000262213 HLA-DRB4P13762 266 aa13.29□□□□□ -0.28
TRAM1-201ENST00000262213 TAL2Q16559 108 aa13.29□□□□□ -0.28
TRAM1-201ENST00000262213 SIRPDQ9H106 197 aa13.29□□□□□ -0.28
TRAM1-201ENST00000262213 HLA-DRB4X5D2U9 266 aa13.29□□□□□ -0.28
TRAM1-201ENST00000262213 SPTAN1Q13813 2472 aaKnown RBP13.28□□□□□ -0.28
TRAM1-201ENST00000262213 CD300EQ496F6 205 aaPredicted RBP13.28□□□□□ -0.28
TRAM1-201ENST00000262213 PHLDA3Q9Y5J5 127 aa13.28□□□□□ -0.28
TRAM1-201ENST00000262213 LGALS1P09382 135 aaKnown RBP13.28□□□□□ -0.28
TRAM1-201ENST00000262213 ATP5G2Q06055 141 aa13.28□□□□□ -0.28
TRAM1-201ENST00000262213 C2orf66Q6UXQ4 117 aa13.28□□□□□ -0.28
TRAM1-201ENST00000262213 SCGB1D4Q6XE38 83 aa13.28□□□□□ -0.28
TRAM1-201ENST00000262213 MRAP2Q96G30 205 aa13.28□□□□□ -0.28
TRAM1-201ENST00000262213 PRADC1Q9BSG0 188 aa13.28□□□□□ -0.28
TRAM1-201ENST00000262213 A0A1B0GWB2 263 aa13.27□□□□□ -0.28
TRAM1-201ENST00000262213 F6UB75 175 aa13.27□□□□□ -0.28
TRAM1-201ENST00000262213 PGPEP1Q9NXJ5 209 aa13.27□□□□□ -0.28
TRAM1-201ENST00000262213 PRSS47A8MTI9 375 aa13.27□□□□□ -0.29
TRAM1-201ENST00000262213 J3QR89 54 aa13.27□□□□□ -0.29
TRAM1-201ENST00000262213 RNASE4P34096 147 aaKnown RBP13.27□□□□□ -0.29
TRAM1-201ENST00000262213 ORMDL2Q53FV1 153 aa13.27□□□□□ -0.29
TRAM1-201ENST00000262213 C11orf71Q6IPW1 123 aa13.27□□□□□ -0.29
TRAM1-201ENST00000262213 ZNF815PA8K554 130 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 HOXA3O43365 443 aaPredicted RBP13.26□□□□□ -0.29
TRAM1-201ENST00000262213 C1orf122Q6ZSJ8 110 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 KLHL30-AS1Q8NEE0 82 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 PLEKHB2Q96CS7 222 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 MRPL16Q9NX20 251 aaKnown RBP13.26□□□□□ -0.29
TRAM1-201ENST00000262213 PRSS29PA6NIE9 313 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 GNRH2O43555 120 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 TRBV12-3P01733 135 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 ANXA2RQ3ZCQ2 193 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 NEXN-AS1Q8NBZ9 246 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 BAALCQ8WXS3 180 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 TOMM6Q96B49 74 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 AJUBAQ96IF1 538 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 IGHV4-4A0A075B6R2 117 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 TRAV12-1A0A0B4J245 112 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 SLC25A16P16260 332 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 SRSF9Q13242 221 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRAM1-201ENST00000262213 UNQ9165/PRO28630Q6UXU0 137 aa13.26□□□□□ -0.29
TRAM1-201ENST00000262213 LOC107984156A0A0G2JMH3 177 aa13.25□□□□□ -0.29
TRAM1-201ENST00000262213 ARL17AQ8IVW1 177 aa13.25□□□□□ -0.29
TRAM1-201ENST00000262213 TRBV7-1A0A0A6YYK4 115 aa13.25□□□□□ -0.29
TRAM1-201ENST00000262213 ADORA2A-AS1P86434 159 aa13.25□□□□□ -0.29
TRAM1-201ENST00000262213 MORN3Q6PF18 240 aaPredicted RBP13.25□□□□□ -0.29
TRAM1-201ENST00000262213 DPH3P1Q9H4G8 78 aa13.25□□□□□ -0.29
TRAM1-201ENST00000262213 ASIPP42127 132 aa13.24□□□□□ -0.29
TRAM1-201ENST00000262213 OR10J6PQ8NGY7 276 aa13.24□□□□□ -0.29
TRAM1-201ENST00000262213 WFDC12Q8WWY7 111 aa13.24□□□□□ -0.29
TRAM1-201ENST00000262213 LINC01549A6NIU2 74 aa13.24□□□□□ -0.29
TRAM1-201ENST00000262213 APOMO95445 188 aa13.24□□□□□ -0.29
TRAM1-201ENST00000262213 UBE2E1P51965 193 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms