RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 PKD1L1Q8TDX9 2849 aa20.67■□□□□ 0.9
SMARCD3-201ENST00000262188 F2Z2F3 143 aa20.67■□□□□ 0.9
SMARCD3-201ENST00000262188 AZU1P20160 251 aa20.67■□□□□ 0.9
SMARCD3-201ENST00000262188 HIST1H1AQ02539 215 aaPredicted RBP20.67■□□□□ 0.9
SMARCD3-201ENST00000262188 SLC25A34Q6PIV7 304 aa20.67■□□□□ 0.9
SMARCD3-201ENST00000262188 WFDC3Q8IUB2 231 aa20.67■□□□□ 0.9
SMARCD3-201ENST00000262188 STXBP6Q8NFX7 210 aa20.67■□□□□ 0.9
SMARCD3-201ENST00000262188 TRAV8-6A0A0B4J262 113 aa20.66■□□□□ 0.9
SMARCD3-201ENST00000262188 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.66■□□□□ 0.9
SMARCD3-201ENST00000262188 K7EP34 96 aa20.65■□□□□ 0.9
SMARCD3-201ENST00000262188 HIST1H1EP10412 219 aaKnown RBP20.65■□□□□ 0.9
SMARCD3-201ENST00000262188 TSKUQ8WUA8 353 aa20.65■□□□□ 0.9
SMARCD3-201ENST00000262188 HLA-DQA1P01909 254 aa20.65■□□□□ 0.9
SMARCD3-201ENST00000262188 MUC21A0A0G2JKD1 596 aa20.64■□□□□ 0.89
SMARCD3-201ENST00000262188 MUC21A0A140T8X8 626 aa20.64■□□□□ 0.89
SMARCD3-201ENST00000262188 TMEM189A5PLL7 270 aa20.64■□□□□ 0.89
SMARCD3-201ENST00000262188 NDUFB4O95168 129 aa20.64■□□□□ 0.89
SMARCD3-201ENST00000262188 HLA-DMBP28068 263 aa20.64■□□□□ 0.89
SMARCD3-201ENST00000262188 CRYBA4P53673 196 aa20.64■□□□□ 0.89
SMARCD3-201ENST00000262188 UBE2G1P62253 170 aa20.64■□□□□ 0.89
SMARCD3-201ENST00000262188 MUC21Q5SSG8 566 aa20.64■□□□□ 0.89
SMARCD3-201ENST00000262188 GPR82Q96P67 336 aa20.64■□□□□ 0.89
SMARCD3-201ENST00000262188 MS4A6AQ9H2W1 248 aa20.64■□□□□ 0.89
SMARCD3-201ENST00000262188 YTHDF2Q9Y5A9 579 aaKnown RBP20.64■□□□□ 0.89
SMARCD3-201ENST00000262188 TRBV19A0A075B6N1 114 aa20.63■□□□□ 0.89
SMARCD3-201ENST00000262188 CKS1BP61024 79 aa20.63■□□□□ 0.89
SMARCD3-201ENST00000262188 FAM162BQ5T6X4 162 aa20.63■□□□□ 0.89
SMARCD3-201ENST00000262188 WFDC9Q8NEX5 89 aa20.63■□□□□ 0.89
SMARCD3-201ENST00000262188 SIGLEC8Q9NYZ4 499 aa20.63■□□□□ 0.89
SMARCD3-201ENST00000262188 HELTA6NFD8 242 aa20.62■□□□□ 0.89
SMARCD3-201ENST00000262188 EXOC3-AS1Q8N2X6 119 aa20.62■□□□□ 0.89
SMARCD3-201ENST00000262188 AP1S3Q96PC3 154 aa20.62■□□□□ 0.89
SMARCD3-201ENST00000262188 DNHD1Q96M86 4753 aa20.61■□□□□ 0.89
SMARCD3-201ENST00000262188 CRXO43186 299 aaPredicted RBP20.61■□□□□ 0.89
SMARCD3-201ENST00000262188 IGLV1-51P01701 117 aa20.61■□□□□ 0.89
SMARCD3-201ENST00000262188 RBPMS2Q6ZRY4 209 aaKnown RBP20.61■□□□□ 0.89
SMARCD3-201ENST00000262188 RNF182Q8N6D2 247 aa20.61■□□□□ 0.89
SMARCD3-201ENST00000262188 H3BRM9 83 aa20.61■□□□□ 0.89
SMARCD3-201ENST00000262188 TMEM167BQ9NRX6 74 aa20.61■□□□□ 0.89
SMARCD3-201ENST00000262188 NAT8BQ9UHF3 227 aa20.61■□□□□ 0.89
SMARCD3-201ENST00000262188 C9orf118A6NHY6 69 aa20.6■□□□□ 0.89
SMARCD3-201ENST00000262188 A0A087X0K7 114 aa20.59■□□□□ 0.89
SMARCD3-201ENST00000262188 C7orf71A4D174 169 aa20.59■□□□□ 0.89
SMARCD3-201ENST00000262188 C9JCJ5 164 aa20.59■□□□□ 0.89
SMARCD3-201ENST00000262188 HSD52Q0P140 79 aa20.59■□□□□ 0.89
SMARCD3-201ENST00000262188 DCANP1Q8TF63 244 aa20.59■□□□□ 0.89
SMARCD3-201ENST00000262188 SORL1Q92673 2214 aa20.59■□□□□ 0.89
SMARCD3-201ENST00000262188 TRAV26-1A0A087WT03 109 aa20.59■□□□□ 0.89
SMARCD3-201ENST00000262188 TRAV8-2A0A0B4J237 113 aa20.59■□□□□ 0.89
SMARCD3-201ENST00000262188 TMEM136Q6ZRR5 245 aa20.59■□□□□ 0.89
SMARCD3-201ENST00000262188 J3QR89 54 aa20.58■□□□□ 0.89
SMARCD3-201ENST00000262188 ATP5G3P48201 142 aa20.58■□□□□ 0.89
SMARCD3-201ENST00000262188 RASL11AQ6T310 242 aa20.58■□□□□ 0.89
SMARCD3-201ENST00000262188 MRAP2Q96G30 205 aa20.58■□□□□ 0.89
SMARCD3-201ENST00000262188 ZNF479Q96JC4 524 aa20.58■□□□□ 0.89
SMARCD3-201ENST00000262188 SOCS3O14543 225 aa20.57■□□□□ 0.88
SMARCD3-201ENST00000262188 OXLD1Q5BKU9 147 aa20.57■□□□□ 0.88
SMARCD3-201ENST00000262188 C9orf66Q5T8R8 295 aa20.57■□□□□ 0.88
SMARCD3-201ENST00000262188 RCHY1Q96PM5 261 aa20.57■□□□□ 0.88
SMARCD3-201ENST00000262188 Q9H3A6 140 aa20.57■□□□□ 0.88
SMARCD3-201ENST00000262188 GGTLC3B5MD39 225 aa20.57■□□□□ 0.88
SMARCD3-201ENST00000262188 DEFB1P60022 68 aa20.57■□□□□ 0.88
SMARCD3-201ENST00000262188 ATOH7Q8N100 152 aa20.57■□□□□ 0.88
SMARCD3-201ENST00000262188 C16orf92Q96LL3 132 aa20.57■□□□□ 0.88
SMARCD3-201ENST00000262188 C20orf173Q96LM9 149 aa20.57■□□□□ 0.88
SMARCD3-201ENST00000262188 ZNF331Q9NQX6 463 aaPredicted RBP20.57■□□□□ 0.88
SMARCD3-201ENST00000262188 ERASQ7Z444 233 aa20.56■□□□□ 0.88
SMARCD3-201ENST00000262188 M0R3E3 92 aa20.55■□□□□ 0.88
SMARCD3-201ENST00000262188 TMEM70Q9BUB7 260 aa20.55■□□□□ 0.88
SMARCD3-201ENST00000262188 A6NDN8 102 aa20.55■□□□□ 0.88
SMARCD3-201ENST00000262188 OR11H12B2RN74 326 aa20.54■□□□□ 0.88
SMARCD3-201ENST00000262188 K7EQG2 157 aa20.54■□□□□ 0.88
SMARCD3-201ENST00000262188 ZNF688P0C7X2 276 aa20.54■□□□□ 0.88
SMARCD3-201ENST00000262188 SLAQ13239 276 aa20.54■□□□□ 0.88
SMARCD3-201ENST00000262188 OR11H2Q8NH07 326 aa20.54■□□□□ 0.88
SMARCD3-201ENST00000262188 C18orf32Q8TCD1 76 aa20.54■□□□□ 0.88
SMARCD3-201ENST00000262188 SPATA25Q9BR10 227 aa20.54■□□□□ 0.88
SMARCD3-201ENST00000262188 FAM231BA6NCW3 169 aa20.54■□□□□ 0.88
SMARCD3-201ENST00000262188 PGPA6NDG6 321 aa20.54■□□□□ 0.88
SMARCD3-201ENST00000262188 LCN12Q6JVE5 192 aa20.54■□□□□ 0.88
SMARCD3-201ENST00000262188 FA2HQ7L5A8 372 aa20.54■□□□□ 0.88
SMARCD3-201ENST00000262188 DERL1Q9BUN8 251 aa20.54■□□□□ 0.88
SMARCD3-201ENST00000262188 SRIP30626 198 aa20.53■□□□□ 0.88
SMARCD3-201ENST00000262188 GNG5P63218 68 aa20.53■□□□□ 0.88
SMARCD3-201ENST00000262188 OR2K2Q8NGT1 345 aa20.53■□□□□ 0.88
SMARCD3-201ENST00000262188 OCC1Q8TAD7 63 aa20.53■□□□□ 0.88
SMARCD3-201ENST00000262188 ZNF256Q9Y2P7 627 aaPredicted RBP20.53■□□□□ 0.88
SMARCD3-201ENST00000262188 HSBP1O75506 76 aa20.52■□□□□ 0.88
SMARCD3-201ENST00000262188 PDE6HQ13956 83 aa20.52■□□□□ 0.88
SMARCD3-201ENST00000262188 KRTAP21-3Q3LHN1 58 aa20.52■□□□□ 0.88
SMARCD3-201ENST00000262188 SCRT2Q9NQ03 307 aa20.52■□□□□ 0.88
SMARCD3-201ENST00000262188 SMAGPQ0VAQ4 97 aa20.52■□□□□ 0.87
SMARCD3-201ENST00000262188 PRR31Q5SQ13 230 aa20.52■□□□□ 0.87
SMARCD3-201ENST00000262188 MCRIP2Q9BUT9 160 aaKnown RBP20.52■□□□□ 0.87
SMARCD3-201ENST00000262188 A0A1W2PRE2 83 aa20.51■□□□□ 0.87
SMARCD3-201ENST00000262188 TSPAN13O95857 204 aa20.51■□□□□ 0.87
SMARCD3-201ENST00000262188 NTF3P20783 257 aa20.51■□□□□ 0.87
SMARCD3-201ENST00000262188 EBLN2Q6P2I7 272 aa20.51■□□□□ 0.87
SMARCD3-201ENST00000262188 OR4C46A6NHA9 309 aa20.5■□□□□ 0.87
SMARCD3-201ENST00000262188 SPAG8Q99932 426 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms