RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 C12orf74Q32Q52 190 aa17.36■□□□□ 0.37
MCF2L-201ENST00000261963 CLEC19AQ6UXS0 136 aa17.36■□□□□ 0.37
MCF2L-201ENST00000261963 ZNF575Q86XF7 245 aa17.36■□□□□ 0.37
MCF2L-201ENST00000261963 HLA-DRB4X5D2U9 266 aa17.36■□□□□ 0.37
MCF2L-201ENST00000261963 TRAV26-1A0A087WT03 109 aa17.35■□□□□ 0.37
MCF2L-201ENST00000261963 ZC2HC1BQ5TFG8 222 aa17.35■□□□□ 0.37
MCF2L-201ENST00000261963 LINC01546A6NGU7 62 aa17.35■□□□□ 0.37
MCF2L-201ENST00000261963 DPM2O94777 84 aa17.35■□□□□ 0.37
MCF2L-201ENST00000261963 TAL2Q16559 108 aa17.35■□□□□ 0.37
MCF2L-201ENST00000261963 PRAC2D3DTV9 90 aa17.34■□□□□ 0.37
MCF2L-201ENST00000261963 AMTNQ6UX39 209 aa17.34■□□□□ 0.37
MCF2L-201ENST00000261963 LINC01559Q495D7 138 aa17.33■□□□□ 0.37
MCF2L-201ENST00000261963 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.33■□□□□ 0.37
MCF2L-201ENST00000261963 TMEM219Q86XT9 240 aa17.33■□□□□ 0.37
MCF2L-201ENST00000261963 PSMG3-AS1Q96PY0 264 aa17.33■□□□□ 0.37
MCF2L-201ENST00000261963 FOXC2Q99958 501 aa17.33■□□□□ 0.37
MCF2L-201ENST00000261963 CFAP46Q8IYW2 2715 aa17.33■□□□□ 0.37
MCF2L-201ENST00000261963 IGHV3OR16-10A0A075B7F0 116 aa17.33■□□□□ 0.36
MCF2L-201ENST00000261963 IGHV3-66A0A0C4DH42 116 aa17.33■□□□□ 0.36
MCF2L-201ENST00000261963 ATP5G2Q06055 141 aa17.33■□□□□ 0.36
MCF2L-201ENST00000261963 ATP5LO75964 103 aa17.32■□□□□ 0.36
MCF2L-201ENST00000261963 CRYBA4P53673 196 aa17.32■□□□□ 0.36
MCF2L-201ENST00000261963 PRO0461Q9UI25 63 aa17.32■□□□□ 0.36
MCF2L-201ENST00000261963 COL12A1Q99715 3063 aa17.32■□□□□ 0.36
MCF2L-201ENST00000261963 ERCC8Q13216 396 aa17.32■□□□□ 0.36
MCF2L-201ENST00000261963 RNF182Q8N6D2 247 aa17.32■□□□□ 0.36
MCF2L-201ENST00000261963 TMEM8BA6NDV4 472 aa17.31■□□□□ 0.36
MCF2L-201ENST00000261963 INSL3P51460 131 aa17.31■□□□□ 0.36
MCF2L-201ENST00000261963 EEF1AKMT3Q96AZ1 226 aa17.31■□□□□ 0.36
MCF2L-201ENST00000261963 NXT2Q9NPJ8 142 aaKnown RBP17.31■□□□□ 0.36
MCF2L-201ENST00000261963 IGHV3OR16-13A0A075B7E8 117 aa17.31■□□□□ 0.36
MCF2L-201ENST00000261963 IGHV3-74A0A0B4J1X5 117 aa17.31■□□□□ 0.36
MCF2L-201ENST00000261963 MTURNQ8N3F0 131 aa17.31■□□□□ 0.36
MCF2L-201ENST00000261963 GEMIN7Q9H840 131 aaKnown RBP17.31■□□□□ 0.36
MCF2L-201ENST00000261963 IGLC6P0CF74 106 aa17.3■□□□□ 0.36
MCF2L-201ENST00000261963 CELSR1Q9NYQ6 3014 aa17.3■□□□□ 0.36
MCF2L-201ENST00000261963 RRN3P1Q2M238 152 aa17.3■□□□□ 0.36
MCF2L-201ENST00000261963 MRPL16Q9NX20 251 aaKnown RBP17.3■□□□□ 0.36
MCF2L-201ENST00000261963 TRBV7-1A0A0A6YYK4 115 aa17.29■□□□□ 0.36
MCF2L-201ENST00000261963 C19orf54Q5BKX5 351 aa17.29■□□□□ 0.36
MCF2L-201ENST00000261963 MAPKAPK5-AS1Q8N8E1 139 aa17.29■□□□□ 0.36
MCF2L-201ENST00000261963 RNF185Q96GF1 192 aa17.29■□□□□ 0.36
MCF2L-201ENST00000261963 TMEM160Q9NX00 188 aa17.29■□□□□ 0.36
MCF2L-201ENST00000261963 HIST1H4GQ99525 98 aa17.29■□□□□ 0.36
MCF2L-201ENST00000261963 MOB4Q9Y3A3 225 aa17.29■□□□□ 0.36
MCF2L-201ENST00000261963 IGHV4-61A0A0C4DH41 118 aa17.28■□□□□ 0.36
MCF2L-201ENST00000261963 A0A1B0GWB2 263 aa17.28■□□□□ 0.36
MCF2L-201ENST00000261963 IGHV3-49A0A0A0MS15 119 aa17.28■□□□□ 0.36
MCF2L-201ENST00000261963 TRAV40A0A0B4J280 105 aa17.28■□□□□ 0.36
MCF2L-201ENST00000261963 IGHV1-69DA0A0B4J2H0 117 aa17.28■□□□□ 0.36
MCF2L-201ENST00000261963 TNFRSF6BO95407 300 aa17.28■□□□□ 0.36
MCF2L-201ENST00000261963 IGHV1-69P01742 117 aa17.28■□□□□ 0.36
MCF2L-201ENST00000261963 BRD3OSQ6XYD6 125 aa17.28■□□□□ 0.36
MCF2L-201ENST00000261963 TMEM158Q8WZ71 300 aa17.28■□□□□ 0.36
MCF2L-201ENST00000261963 LINC00527Q9UJ94 153 aa17.28■□□□□ 0.36
MCF2L-201ENST00000261963 APOMO95445 188 aa17.27■□□□□ 0.36
MCF2L-201ENST00000261963 SRSF2Q01130 221 aaKnown RBP17.27■□□□□ 0.36
MCF2L-201ENST00000261963 SLC50A1Q9BRV3 221 aa17.27■□□□□ 0.36
MCF2L-201ENST00000261963 TRAV8-2A0A0B4J237 113 aa17.27■□□□□ 0.35
MCF2L-201ENST00000261963 C20orf78Q9BR46 151 aa17.27■□□□□ 0.35
MCF2L-201ENST00000261963 TRAV41A0A0B4J266 112 aa17.26■□□□□ 0.35
MCF2L-201ENST00000261963 RBAKDNA6NC62 111 aa17.26■□□□□ 0.35
MCF2L-201ENST00000261963 GAS8-AS1O95177 125 aa17.26■□□□□ 0.35
MCF2L-201ENST00000261963 MSRB1Q9NZV6 116 aa17.26■□□□□ 0.35
MCF2L-201ENST00000261963 U3KQE9 123 aa17.26■□□□□ 0.35
MCF2L-201ENST00000261963 ORM1P02763 201 aa17.26■□□□□ 0.35
MCF2L-201ENST00000261963 IL17RELQ6ZVW7 336 aa17.26■□□□□ 0.35
MCF2L-201ENST00000261963 METTL26Q96S19 204 aa17.26■□□□□ 0.35
MCF2L-201ENST00000261963 FABP5P3A8MUU1 101 aa17.25■□□□□ 0.35
MCF2L-201ENST00000261963 C8orf86Q6ZUL3 223 aa17.25■□□□□ 0.35
MCF2L-201ENST00000261963 MRPL35Q9NZE8 188 aaKnown RBP17.25■□□□□ 0.35
MCF2L-201ENST00000261963 CYSLTR1Q9Y271 337 aa17.25■□□□□ 0.35
MCF2L-201ENST00000261963 CRIP2P52943 208 aaPredicted RBP17.24■□□□□ 0.35
MCF2L-201ENST00000261963 FOXI1Q12951 378 aa17.24■□□□□ 0.35
MCF2L-201ENST00000261963 ZNF418Q8TF45 676 aaPredicted RBP17.24■□□□□ 0.35
MCF2L-201ENST00000261963 PIMREGQ9BSJ6 248 aa17.24■□□□□ 0.35
MCF2L-201ENST00000261963 SPG11Q96JI7 2443 aa17.24■□□□□ 0.35
MCF2L-201ENST00000261963 CNFNQ9BYD5 112 aa17.23■□□□□ 0.35
MCF2L-201ENST00000261963 AGPAT4-IT1Q9H0P7 198 aa17.23■□□□□ 0.35
MCF2L-201ENST00000261963 SYT8Q8NBV8 401 aa17.23■□□□□ 0.35
MCF2L-201ENST00000261963 C10orf105Q8TEF2 133 aa17.23■□□□□ 0.35
MCF2L-201ENST00000261963 CACNA1AO00555 2505 aa17.23■□□□□ 0.35
MCF2L-201ENST00000261963 Q8N8P6 123 aa17.22■□□□□ 0.35
MCF2L-201ENST00000261963 C1QTNF4Q9BXJ3 329 aa17.22■□□□□ 0.35
MCF2L-201ENST00000261963 IGHV4-38-2P0DP08 117 aa17.22■□□□□ 0.35
MCF2L-201ENST00000261963 ATP6V0E2Q8NHE4 81 aa17.22■□□□□ 0.35
MCF2L-201ENST00000261963 MYOZ3Q8TDC0 251 aa17.22■□□□□ 0.35
MCF2L-201ENST00000261963 FLNCQ14315 2725 aa17.22■□□□□ 0.35
MCF2L-201ENST00000261963 TRBV7-3A0A075B6L6 115 aa17.21■□□□□ 0.35
MCF2L-201ENST00000261963 FAM223BA6NKX1 122 aa17.21■□□□□ 0.35
MCF2L-201ENST00000261963 SPINK8P0C7L1 97 aa17.21■□□□□ 0.35
MCF2L-201ENST00000261963 FAM223AQ8IWN6 122 aa17.21■□□□□ 0.35
MCF2L-201ENST00000261963 CCL19Q99731 98 aa17.21■□□□□ 0.35
MCF2L-201ENST00000261963 MAP1AP78559 2803 aaPredicted RBP17.21■□□□□ 0.35
MCF2L-201ENST00000261963 CDIP1Q9H305 208 aa17.21■□□□□ 0.35
MCF2L-201ENST00000261963 C11orf21Q9P2W6 132 aa17.21■□□□□ 0.35
MCF2L-201ENST00000261963 TRGV3P03979 118 aa17.2■□□□□ 0.34
MCF2L-201ENST00000261963 PPIFP30405 207 aaKnown RBP17.2■□□□□ 0.34
MCF2L-201ENST00000261963 GATA1P15976 413 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-201ENST00000261963 MRPL53Q96EL3 112 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 267.5 ms