RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 CENPVL3A0A0U1RRI6 287 aa14.77□□□□□ -0.05
SCARB1-201ENST00000261693 TRBV7-1A0A0A6YYK4 115 aa14.76□□□□□ -0.05
SCARB1-201ENST00000261693 M0R381 172 aa14.76□□□□□ -0.05
SCARB1-201ENST00000261693 ATP5G2Q06055 141 aa14.76□□□□□ -0.05
SCARB1-201ENST00000261693 SRSF1Q07955 248 aaKnown RBP eCLIP14.76□□□□□ -0.052e-6■■□□□ 11.8
SCARB1-201ENST00000261693 UBTD1Q9HAC8 227 aa14.76□□□□□ -0.05
SCARB1-201ENST00000261693 A0A087WX48 190 aa14.75□□□□□ -0.05
SCARB1-201ENST00000261693 PSMG4Q5JS54 123 aa14.75□□□□□ -0.05
SCARB1-201ENST00000261693 PHLDA1Q8WV24 401 aaPredicted RBP14.75□□□□□ -0.05
SCARB1-201ENST00000261693 RPL24P83731 157 aaKnown RBP14.74□□□□□ -0.05
SCARB1-201ENST00000261693 C5orf56Q8N8D9 126 aa14.74□□□□□ -0.05
SCARB1-201ENST00000261693 BPESC1Q9GZL8 116 aa14.74□□□□□ -0.05
SCARB1-201ENST00000261693 U3KQE9 123 aa14.74□□□□□ -0.05
SCARB1-201ENST00000261693 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.73□□□□□ -0.05
SCARB1-201ENST00000261693 KLK9Q2XQG4 91 aa14.73□□□□□ -0.05
SCARB1-201ENST00000261693 MRPL53Q96EL3 112 aaKnown RBP14.73□□□□□ -0.05
SCARB1-201ENST00000261693 TM2D2Q9BX73 214 aa14.73□□□□□ -0.05
SCARB1-201ENST00000261693 KLK9Q9UKQ9 250 aa14.73□□□□□ -0.05
SCARB1-201ENST00000261693 NCOR2Q9Y618 2525 aa14.73□□□□□ -0.05
SCARB1-201ENST00000261693 PRSS47A8MTI9 375 aa14.73□□□□□ -0.05
SCARB1-201ENST00000261693 NPFFO15130 113 aa14.73□□□□□ -0.05
SCARB1-201ENST00000261693 TRBV12-3P01733 135 aa14.73□□□□□ -0.05
SCARB1-201ENST00000261693 UNQ9165/PRO28630Q6UXU0 137 aa14.73□□□□□ -0.05
SCARB1-201ENST00000261693 SMIM2Q9BVW6 85 aa14.73□□□□□ -0.05
SCARB1-201ENST00000261693 HIF1ANQ9NWT6 349 aa14.73□□□□□ -0.05
SCARB1-201ENST00000261693 RAXQ9Y2V3 346 aa14.73□□□□□ -0.05
SCARB1-201ENST00000261693 IGHV4-4A0A075B6R2 117 aa14.72□□□□□ -0.05
SCARB1-201ENST00000261693 RPL39LQ96EH5 51 aaKnown RBP14.72□□□□□ -0.05
SCARB1-201ENST00000261693 KLRB1Q12918 225 aa14.72□□□□□ -0.05
SCARB1-201ENST00000261693 C14orf178Q8N769 122 aaPredicted RBP14.72□□□□□ -0.05
SCARB1-201ENST00000261693 CHD8Q9HCK8 2581 aa14.72□□□□□ -0.05
SCARB1-201ENST00000261693 ABCA2Q9BZC7 2435 aa14.71□□□□□ -0.05
SCARB1-201ENST00000261693 SPTBN4Q9H254 2564 aa14.71□□□□□ -0.05
SCARB1-201ENST00000261693 IGKV3-7A0A075B6H7 116 aa14.71□□□□□ -0.06
SCARB1-201ENST00000261693 TRAV41A0A0B4J266 112 aa14.71□□□□□ -0.06
SCARB1-201ENST00000261693 S100A4P26447 101 aaKnown RBP14.71□□□□□ -0.06
SCARB1-201ENST00000261693 LMO4P61968 165 aa14.71□□□□□ -0.06
SCARB1-201ENST00000261693 GLMPQ8WWB7 406 aa14.71□□□□□ -0.06
SCARB1-201ENST00000261693 HIST1H4GQ99525 98 aa14.71□□□□□ -0.06
SCARB1-201ENST00000261693 PLNP26678 52 aa14.7□□□□□ -0.06
SCARB1-201ENST00000261693 ARL3P36405 182 aa14.7□□□□□ -0.06
SCARB1-201ENST00000261693 RPL11P62913 178 aaKnown RBP14.7□□□□□ -0.06
SCARB1-201ENST00000261693 RASL10AQ92737 203 aa14.7□□□□□ -0.06
SCARB1-201ENST00000261693 MRAP2Q96G30 205 aa14.7□□□□□ -0.06
SCARB1-201ENST00000261693 SCGB3A1Q96QR1 104 aa14.7□□□□□ -0.06
SCARB1-201ENST00000261693 TEX48A0A1B0GUV7 120 aa14.69□□□□□ -0.06
SCARB1-201ENST00000261693 GPHB5Q86YW7 130 aa14.69□□□□□ -0.06
SCARB1-201ENST00000261693 ITLN2Q8WWU7 325 aaPredicted RBP14.69□□□□□ -0.06
SCARB1-201ENST00000261693 IGLL5B9A064 214 aa14.69□□□□□ -0.06
SCARB1-201ENST00000261693 F6UB75 175 aa14.69□□□□□ -0.06
SCARB1-201ENST00000261693 H7C1H1 209 aa14.69□□□□□ -0.06
SCARB1-201ENST00000261693 MGPP08493 103 aa14.69□□□□□ -0.06
SCARB1-201ENST00000261693 ZFAND2AQ8N6M9 145 aa14.69□□□□□ -0.06
SCARB1-201ENST00000261693 SUMO2P61956 95 aaKnown RBP14.68□□□□□ -0.06
SCARB1-201ENST00000261693 C9orf139Q6ZV77 190 aa14.68□□□□□ -0.06
SCARB1-201ENST00000261693 DEFB104AQ8WTQ1 72 aa14.68□□□□□ -0.06
SCARB1-201ENST00000261693 F8VRH5 84 aa14.68□□□□□ -0.06
SCARB1-201ENST00000261693 HLA-DRB4P13762 266 aa14.68□□□□□ -0.06
SCARB1-201ENST00000261693 C12orf74Q32Q52 190 aa14.68□□□□□ -0.06
SCARB1-201ENST00000261693 BRD3OSQ6XYD6 125 aa14.68□□□□□ -0.06
SCARB1-201ENST00000261693 CHTOPQ9Y3Y2 248 aaKnown RBP14.68□□□□□ -0.06
SCARB1-201ENST00000261693 PHLDA3Q9Y5J5 127 aa14.68□□□□□ -0.06
SCARB1-201ENST00000261693 HLA-DRB4X5D2U9 266 aa14.68□□□□□ -0.06
SCARB1-201ENST00000261693 RNASE4P34096 147 aaKnown RBP14.67□□□□□ -0.06
SCARB1-201ENST00000261693 OR10J6PQ8NGY7 276 aa14.67□□□□□ -0.06
SCARB1-201ENST00000261693 IGHV3-11P01762 117 aa14.67□□□□□ -0.06
SCARB1-201ENST00000261693 ANXA2RQ3ZCQ2 193 aa14.67□□□□□ -0.06
SCARB1-201ENST00000261693 E9PLD3 99 aa14.66□□□□□ -0.06
SCARB1-201ENST00000261693 GNRH2O43555 120 aa14.66□□□□□ -0.06
SCARB1-201ENST00000261693 ZNF479Q96JC4 524 aa14.66□□□□□ -0.06
SCARB1-201ENST00000261693 MUC4Q99102 2169 aa14.66□□□□□ -0.06
SCARB1-201ENST00000261693 AMTNQ6UX39 209 aa14.66□□□□□ -0.06
SCARB1-201ENST00000261693 LCNL1Q6ZST4 164 aa14.66□□□□□ -0.06
SCARB1-201ENST00000261693 ASIPP42127 132 aa14.65□□□□□ -0.06
SCARB1-201ENST00000261693 ORMDL2Q53FV1 153 aa14.65□□□□□ -0.06
SCARB1-201ENST00000261693 MTURNQ8N3F0 131 aa14.65□□□□□ -0.06
SCARB1-201ENST00000261693 TOMM6Q96B49 74 aa14.65□□□□□ -0.06
SCARB1-201ENST00000261693 MOB4Q9Y3A3 225 aa14.65□□□□□ -0.06
SCARB1-201ENST00000261693 TRAV21A0A0B4J279 112 aa14.65□□□□□ -0.06
SCARB1-201ENST00000261693 OR11H12B2RN74 326 aa14.65□□□□□ -0.06
SCARB1-201ENST00000261693 H3BMG7 143 aa14.65□□□□□ -0.06
SCARB1-201ENST00000261693 WFDC2Q14508 124 aa14.65□□□□□ -0.06
SCARB1-201ENST00000261693 OR11H1Q8NG94 326 aa14.65□□□□□ -0.06
SCARB1-201ENST00000261693 OR11H2Q8NH07 326 aa14.65□□□□□ -0.06
SCARB1-201ENST00000261693 LINC00477Q96M19 166 aa14.65□□□□□ -0.06
SCARB1-201ENST00000261693 DPH3P1Q9H4G8 78 aa14.65□□□□□ -0.06
SCARB1-201ENST00000261693 TRAV12-1A0A0B4J245 112 aa14.64□□□□□ -0.07
SCARB1-201ENST00000261693 FOXI2Q6ZQN5 318 aa14.64□□□□□ -0.07
SCARB1-201ENST00000261693 SPG11Q96JI7 2443 aa14.64□□□□□ -0.07
SCARB1-201ENST00000261693 FAM223BA6NKX1 122 aa14.64□□□□□ -0.07
SCARB1-201ENST00000261693 C2orf66Q6UXQ4 117 aa14.64□□□□□ -0.07
SCARB1-201ENST00000261693 FAM223AQ8IWN6 122 aa14.64□□□□□ -0.07
SCARB1-201ENST00000261693 NEXN-AS1Q8NBZ9 246 aa14.64□□□□□ -0.07
SCARB1-201ENST00000261693 CYSLTR1Q9Y271 337 aa14.64□□□□□ -0.07
SCARB1-201ENST00000261693 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.64□□□□□ -0.073e-7■■■□□ 14.7
SCARB1-201ENST00000261693 MYMXA0A1B0GTQ4 84 aa14.63□□□□□ -0.07
SCARB1-201ENST00000261693 LY6EQ16553 131 aa14.63□□□□□ -0.07
SCARB1-201ENST00000261693 LENEPQ9Y5L5 61 aa14.63□□□□□ -0.07
SCARB1-201ENST00000261693 TAL2Q16559 108 aa14.63□□□□□ -0.07
SCARB1-201ENST00000261693 CRYBG3Q68DQ2 2970 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms