RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 TMEM8BA6NDV4 472 aa11.59□□□□□ -0.55
DDX56-201ENST00000258772 IGHV4-39P01824 125 aa11.59□□□□□ -0.55
DDX56-201ENST00000258772 RNF151Q2KHN1 245 aa11.59□□□□□ -0.55
DDX56-201ENST00000258772 UFSP1Q6NVU6 142 aa11.59□□□□□ -0.55
DDX56-201ENST00000258772 JMJD8Q96S16 334 aa11.59□□□□□ -0.55
DDX56-201ENST00000258772 TTTY13Q9BZ97 58 aa11.59□□□□□ -0.55
DDX56-201ENST00000258772 HIGD1BQ9P298 99 aa11.59□□□□□ -0.55
DDX56-201ENST00000258772 SPTBN4Q9H254 2564 aa11.59□□□□□ -0.55
DDX56-201ENST00000258772 A0A0G2JLM5 398 aa11.59□□□□□ -0.55
DDX56-201ENST00000258772 SRSF1Q07955 248 aaKnown RBP eCLIP11.59□□□□□ -0.554e-7■□□□□ 8.4
DDX56-201ENST00000258772 ZC2HC1BQ5TFG8 222 aa11.59□□□□□ -0.55
DDX56-201ENST00000258772 GTSCR1Q86UQ5 136 aa11.59□□□□□ -0.55
DDX56-201ENST00000258772 SPTAN1Q13813 2472 aaKnown RBP11.59□□□□□ -0.55
DDX56-201ENST00000258772 NDUFA4O00483 81 aa11.58□□□□□ -0.56
DDX56-201ENST00000258772 GTF2H5Q6ZYL4 71 aa11.58□□□□□ -0.56
DDX56-201ENST00000258772 ZFAND2AQ8N6M9 145 aa11.58□□□□□ -0.56
DDX56-201ENST00000258772 NAA38Q9BRA0 125 aaKnown RBP11.58□□□□□ -0.56
DDX56-201ENST00000258772 MEGF9Q9H1U4 602 aa11.58□□□□□ -0.56
DDX56-201ENST00000258772 TRAV40A0A0B4J280 105 aa11.58□□□□□ -0.56
DDX56-201ENST00000258772 RAB37Q96AX2 223 aa11.58□□□□□ -0.56
DDX56-201ENST00000258772 MRAP2Q96G30 205 aa11.58□□□□□ -0.56
DDX56-201ENST00000258772 TMEM160Q9NX00 188 aa11.58□□□□□ -0.56
DDX56-201ENST00000258772 MRPL35Q9NZE8 188 aaKnown RBP11.58□□□□□ -0.56
DDX56-201ENST00000258772 SOCS3O14543 225 aa11.57□□□□□ -0.56
DDX56-201ENST00000258772 OR10J6PQ8NGY7 276 aa11.57□□□□□ -0.56
DDX56-201ENST00000258772 NCOR2Q9Y618 2525 aa11.57□□□□□ -0.56
DDX56-201ENST00000258772 OVOL1O14753 267 aa11.57□□□□□ -0.56
DDX56-201ENST00000258772 TM4SF20Q53R12 229 aa11.57□□□□□ -0.56
DDX56-201ENST00000258772 TRBV25-1A0A075B6N4 114 aa11.56□□□□□ -0.56
DDX56-201ENST00000258772 TRAV21A0A0B4J279 112 aa11.56□□□□□ -0.56
DDX56-201ENST00000258772 A0A087WX48 190 aa11.55□□□□□ -0.56
DDX56-201ENST00000258772 K7EP34 96 aa11.55□□□□□ -0.56
DDX56-201ENST00000258772 NDUFS8O00217 210 aa11.55□□□□□ -0.56
DDX56-201ENST00000258772 DEFB1P60022 68 aa11.55□□□□□ -0.56
DDX56-201ENST00000258772 CHAC1Q9BUX1 264 aa11.55□□□□□ -0.56
DDX56-201ENST00000258772 SMIM2Q9BVW6 85 aa11.55□□□□□ -0.56
DDX56-201ENST00000258772 SPRY2O43597 315 aa11.55□□□□□ -0.56
DDX56-201ENST00000258772 GCSHP23434 173 aa11.55□□□□□ -0.56
DDX56-201ENST00000258772 LY6EQ16553 131 aa11.55□□□□□ -0.56
DDX56-201ENST00000258772 USMG5Q96IX5 58 aa11.55□□□□□ -0.56
DDX56-201ENST00000258772 IGHV4-61A0A0C4DH41 118 aa11.54□□□□□ -0.56
DDX56-201ENST00000258772 M0R381 172 aa11.54□□□□□ -0.56
DDX56-201ENST00000258772 IGHV3-11P01762 117 aa11.54□□□□□ -0.56
DDX56-201ENST00000258772 IGHG2P01859 326 aa11.54□□□□□ -0.56
DDX56-201ENST00000258772 SMIM13P0DJ93 91 aa11.54□□□□□ -0.56
DDX56-201ENST00000258772 HLA-DRB4P13762 266 aa11.54□□□□□ -0.56
DDX56-201ENST00000258772 FXYD2P54710 66 aa11.54□□□□□ -0.56
DDX56-201ENST00000258772 HLA-DRB4X5D2U9 266 aa11.54□□□□□ -0.56
DDX56-201ENST00000258772 BRI3O95415 125 aa11.54□□□□□ -0.56
DDX56-201ENST00000258772 IGHV4-38-2P0DP08 117 aa11.54□□□□□ -0.56
DDX56-201ENST00000258772 S100A4P26447 101 aaKnown RBP11.54□□□□□ -0.56
DDX56-201ENST00000258772 KLK15Q9H2R5 256 aa11.54□□□□□ -0.56
DDX56-201ENST00000258772 CHD8Q9HCK8 2581 aa11.53□□□□□ -0.56
DDX56-201ENST00000258772 VPS13CQ709C8 3753 aa11.53□□□□□ -0.56
DDX56-201ENST00000258772 A0A1W2PPM0 123 aa11.53□□□□□ -0.56
DDX56-201ENST00000258772 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.53□□□□□ -0.56
DDX56-201ENST00000258772 H3BUA1 57 aa11.53□□□□□ -0.56
DDX56-201ENST00000258772 GNLYP22749 145 aa11.53□□□□□ -0.56
DDX56-201ENST00000258772 ANXA2RQ3ZCQ2 193 aa11.53□□□□□ -0.56
DDX56-201ENST00000258772 RASL10AQ92737 203 aa11.53□□□□□ -0.56
DDX56-201ENST00000258772 FAM19A4Q96LR4 140 aa11.53□□□□□ -0.56
DDX56-201ENST00000258772 SELENOKQ9Y6D0 94 aa11.53□□□□□ -0.56
DDX56-201ENST00000258772 PF4V1P10720 104 aa11.53□□□□□ -0.56
DDX56-201ENST00000258772 ASIPP42127 132 aa11.53□□□□□ -0.56
DDX56-201ENST00000258772 SUMO2P61956 95 aaKnown RBP11.53□□□□□ -0.56
DDX56-201ENST00000258772 RPL11P62913 178 aaKnown RBP11.53□□□□□ -0.56
DDX56-201ENST00000258772 PIMREGQ9BSJ6 248 aa11.53□□□□□ -0.56
DDX56-201ENST00000258772 DPH3P1Q9H4G8 78 aa11.53□□□□□ -0.56
DDX56-201ENST00000258772 PHLDA3Q9Y5J5 127 aa11.53□□□□□ -0.56
DDX56-201ENST00000258772 K7ERU9 68 aa11.52□□□□□ -0.57
DDX56-201ENST00000258772 ORMDL2Q53FV1 153 aa11.52□□□□□ -0.57
DDX56-201ENST00000258772 C14orf178Q8N769 122 aaPredicted RBP11.52□□□□□ -0.57
DDX56-201ENST00000258772 MAPKAPK5-AS1Q8N8E1 139 aa11.52□□□□□ -0.57
DDX56-201ENST00000258772 F6UB75 175 aa11.52□□□□□ -0.57
DDX56-201ENST00000258772 H3BUX3 64 aa11.52□□□□□ -0.57
DDX56-201ENST00000258772 RNASE4P34096 147 aaKnown RBP11.52□□□□□ -0.57
DDX56-201ENST00000258772 BLCAPP62952 87 aa11.52□□□□□ -0.57
DDX56-201ENST00000258772 C20orf78Q9BR46 151 aa11.52□□□□□ -0.57
DDX56-201ENST00000258772 VPS25Q9BRG1 176 aa11.52□□□□□ -0.57
DDX56-201ENST00000258772 TRAV12-1A0A0B4J245 112 aa11.51□□□□□ -0.57
DDX56-201ENST00000258772 A6NDX4 124 aa11.51□□□□□ -0.57
DDX56-201ENST00000258772 PLNP26678 52 aa11.51□□□□□ -0.57
DDX56-201ENST00000258772 RPL39LQ96EH5 51 aaKnown RBP11.51□□□□□ -0.57
DDX56-201ENST00000258772 TM2D2Q9BX73 214 aa11.51□□□□□ -0.57
DDX56-201ENST00000258772 AGRNO00468 2067 aa11.51□□□□□ -0.57
DDX56-201ENST00000258772 CELSR1Q9NYQ6 3014 aa11.51□□□□□ -0.57
DDX56-201ENST00000258772 IGKV3-7A0A075B6H7 116 aa11.51□□□□□ -0.57
DDX56-201ENST00000258772 H7C1H1 209 aa11.51□□□□□ -0.57
DDX56-201ENST00000258772 GNRH2O43555 120 aa11.51□□□□□ -0.57
DDX56-201ENST00000258772 SAMD5Q5TGI4 173 aa11.51□□□□□ -0.57
DDX56-201ENST00000258772 APRG1Q8IVJ8 170 aa11.51□□□□□ -0.57
DDX56-201ENST00000258772 CEND1Q8N111 149 aa11.51□□□□□ -0.57
DDX56-201ENST00000258772 TOMM6Q96B49 74 aa11.51□□□□□ -0.57
DDX56-201ENST00000258772 RHPN1-AS1Q9BWJ2 59 aa11.51□□□□□ -0.57
DDX56-201ENST00000258772 SPCS1Q9Y6A9 102 aa11.51□□□□□ -0.57
DDX56-201ENST00000258772 F8VRH5 84 aa11.5□□□□□ -0.57
DDX56-201ENST00000258772 MED14OSP0DP75 135 aa11.5□□□□□ -0.57
DDX56-201ENST00000258772 FABP2P12104 132 aa11.5□□□□□ -0.57
DDX56-201ENST00000258772 Q6ZS46 218 aa11.5□□□□□ -0.57
DDX56-201ENST00000258772 LCNL1Q6ZST4 164 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms