RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 FAM162BQ5T6X4 162 aa11.26□□□□□ -0.61
TRAFD1-201ENST00000257604 NDUFS8O00217 210 aa11.25□□□□□ -0.61
TRAFD1-201ENST00000257604 PET117Q6UWS5 81 aa11.25□□□□□ -0.61
TRAFD1-201ENST00000257604 C2orf91Q6ZV80 131 aa11.25□□□□□ -0.61
TRAFD1-201ENST00000257604 AMN1Q8IY45 258 aa11.25□□□□□ -0.61
TRAFD1-201ENST00000257604 Q96MF0 132 aa11.25□□□□□ -0.61
TRAFD1-201ENST00000257604 NDFIP1Q9BT67 221 aa11.25□□□□□ -0.61
TRAFD1-201ENST00000257604 TMEM238LA0A1B0GVL6 79 aa11.25□□□□□ -0.61
TRAFD1-201ENST00000257604 HIST1H1AQ02539 215 aaPredicted RBP11.25□□□□□ -0.61
TRAFD1-201ENST00000257604 SMAGPQ0VAQ4 97 aa11.25□□□□□ -0.61
TRAFD1-201ENST00000257604 LYZL1Q6UWQ5 148 aa11.25□□□□□ -0.61
TRAFD1-201ENST00000257604 A0A1B0GUT8 65 aa11.24□□□□□ -0.61
TRAFD1-201ENST00000257604 TWIST1Q15672 202 aa11.24□□□□□ -0.61
TRAFD1-201ENST00000257604 MTURNQ8N3F0 131 aa11.24□□□□□ -0.61
TRAFD1-201ENST00000257604 D6R8Y8 96 aa11.24□□□□□ -0.61
TRAFD1-201ENST00000257604 PCP2Q8IVA1 136 aa11.24□□□□□ -0.61
TRAFD1-201ENST00000257604 ZNF747Q9BV97 191 aa11.24□□□□□ -0.61
TRAFD1-201ENST00000257604 ZFAND3Q9H8U3 227 aa11.24□□□□□ -0.61
TRAFD1-201ENST00000257604 AGRNO00468 2067 aa11.24□□□□□ -0.61
TRAFD1-201ENST00000257604 CD5LO43866 347 aa11.24□□□□□ -0.61
TRAFD1-201ENST00000257604 IGF1P05019 195 aa11.24□□□□□ -0.61
TRAFD1-201ENST00000257604 JMJD8Q96S16 334 aa11.24□□□□□ -0.61
TRAFD1-201ENST00000257604 MSRB1Q9NZV6 116 aa11.24□□□□□ -0.61
TRAFD1-201ENST00000257604 GCN1Q92616 2671 aaKnown RBP11.23□□□□□ -0.61
TRAFD1-201ENST00000257604 CLPSL1A2RUU4 121 aa11.23□□□□□ -0.61
TRAFD1-201ENST00000257604 LINC01356Q8N9X3 169 aa11.23□□□□□ -0.61
TRAFD1-201ENST00000257604 DUX3Q96PT4 197 aa11.23□□□□□ -0.61
TRAFD1-201ENST00000257604 PRR25Q96S07 402 aa11.23□□□□□ -0.61
TRAFD1-201ENST00000257604 GTSF1LQ9H1H1 148 aa11.23□□□□□ -0.61
TRAFD1-201ENST00000257604 LINC01545Q5VT33 79 aa11.23□□□□□ -0.61
TRAFD1-201ENST00000257604 C8orf86Q6ZUL3 223 aa11.23□□□□□ -0.61
TRAFD1-201ENST00000257604 OR1N2Q8NGR9 330 aa11.23□□□□□ -0.61
TRAFD1-201ENST00000257604 K7ERU9 68 aa11.22□□□□□ -0.61
TRAFD1-201ENST00000257604 GAS8-AS1O95177 125 aa11.22□□□□□ -0.61
TRAFD1-201ENST00000257604 COX8AP10176 69 aa11.22□□□□□ -0.61
TRAFD1-201ENST00000257604 TMEM97Q5BJF2 176 aa11.22□□□□□ -0.61
TRAFD1-201ENST00000257604 ZNF492Q9P255 531 aa11.22□□□□□ -0.61
TRAFD1-201ENST00000257604 HAX1O00165 279 aa11.22□□□□□ -0.61
TRAFD1-201ENST00000257604 PEF1Q9UBV8 284 aaKnown RBP11.22□□□□□ -0.61
TRAFD1-201ENST00000257604 UNC79Q9P2D8 2635 aa11.22□□□□□ -0.61
TRAFD1-201ENST00000257604 TRBV7-1A0A0A6YYK4 115 aa11.22□□□□□ -0.61
TRAFD1-201ENST00000257604 CT83Q5H943 113 aa11.22□□□□□ -0.61
TRAFD1-201ENST00000257604 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.22□□□□□ -0.61
TRAFD1-201ENST00000257604 PPBPP02775 128 aa11.21□□□□□ -0.61
TRAFD1-201ENST00000257604 EVI2AP22794 236 aa11.21□□□□□ -0.61
TRAFD1-201ENST00000257604 K7ERJ3 54 aa11.21□□□□□ -0.62
TRAFD1-201ENST00000257604 RPL24P83731 157 aaKnown RBP11.21□□□□□ -0.62
TRAFD1-201ENST00000257604 DEFB136Q30KP8 78 aa11.21□□□□□ -0.62
TRAFD1-201ENST00000257604 TMEM78Q5T7P6 136 aa11.21□□□□□ -0.62
TRAFD1-201ENST00000257604 OR10AG1Q8NH19 301 aa11.21□□□□□ -0.62
TRAFD1-201ENST00000257604 HOXA3O43365 443 aaPredicted RBP11.2□□□□□ -0.62
TRAFD1-201ENST00000257604 IGHG4P01861 327 aa11.2□□□□□ -0.62
TRAFD1-201ENST00000257604 RAB9AP51151 201 aa11.2□□□□□ -0.62
TRAFD1-201ENST00000257604 GFRA4Q9GZZ7 299 aa11.2□□□□□ -0.62
TRAFD1-201ENST00000257604 DKK2Q9UBU2 259 aa11.2□□□□□ -0.62
TRAFD1-201ENST00000257604 A6NDX4 124 aa11.2□□□□□ -0.62
TRAFD1-201ENST00000257604 KIR3DS1Q14943 382 aa11.2□□□□□ -0.62
TRAFD1-201ENST00000257604 AGPAT4-IT1Q9H0P7 198 aa11.2□□□□□ -0.62
TRAFD1-201ENST00000257604 MS4A6AQ9H2W1 248 aa11.2□□□□□ -0.62
TRAFD1-201ENST00000257604 A0A096LNJ9 63 aa11.2□□□□□ -0.62
TRAFD1-201ENST00000257604 NPIPB6E9PJ23 425 aa11.2□□□□□ -0.62
TRAFD1-201ENST00000257604 RIGQ13278 110 aa11.2□□□□□ -0.62
TRAFD1-201ENST00000257604 UFC1Q9Y3C8 167 aa11.2□□□□□ -0.62
TRAFD1-201ENST00000257604 PDE6HQ13956 83 aa11.19□□□□□ -0.62
TRAFD1-201ENST00000257604 LYPD1Q8N2G4 141 aa11.19□□□□□ -0.62
TRAFD1-201ENST00000257604 NPFFR1Q9GZQ6 430 aa11.19□□□□□ -0.62
TRAFD1-201ENST00000257604 SIGLEC8Q9NYZ4 499 aa11.19□□□□□ -0.62
TRAFD1-201ENST00000257604 GCSHP23434 173 aa11.19□□□□□ -0.62
TRAFD1-201ENST00000257604 SMIM12Q96EX1 92 aa11.19□□□□□ -0.62
TRAFD1-201ENST00000257604 RHPN1-AS1Q9BWJ2 59 aa11.19□□□□□ -0.62
TRAFD1-201ENST00000257604 GATA1P15976 413 aaPredicted RBP11.18□□□□□ -0.62
TRAFD1-201ENST00000257604 IGHG2P01859 326 aa11.18□□□□□ -0.62
TRAFD1-201ENST00000257604 HTN1P15515 57 aa11.18□□□□□ -0.62
TRAFD1-201ENST00000257604 WFDC11Q8NEX6 87 aa11.18□□□□□ -0.62
TRAFD1-201ENST00000257604 SLC25A16P16260 332 aa11.18□□□□□ -0.62
TRAFD1-201ENST00000257604 SAMD13Q5VXD3 122 aa11.17□□□□□ -0.62
TRAFD1-201ENST00000257604 FER1L6-AS1Q8NA97 138 aa11.17□□□□□ -0.62
TRAFD1-201ENST00000257604 PRELID3AQ96N28 172 aa11.17□□□□□ -0.62
TRAFD1-201ENST00000257604 FGF6P10767 208 aa11.17□□□□□ -0.62
TRAFD1-201ENST00000257604 CFAP161Q6P656 301 aa11.17□□□□□ -0.62
TRAFD1-201ENST00000257604 C20orf173Q96LM9 149 aa11.17□□□□□ -0.62
TRAFD1-201ENST00000257604 SYNJ2BPP57105 145 aa11.16□□□□□ -0.62
TRAFD1-201ENST00000257604 ZNF48Q96MX3 618 aaPredicted RBP11.16□□□□□ -0.62
TRAFD1-201ENST00000257604 TRAV8-2A0A0B4J237 113 aa11.16□□□□□ -0.62
TRAFD1-201ENST00000257604 A0A1W2PRX2 142 aa11.16□□□□□ -0.62
TRAFD1-201ENST00000257604 FCER1GP30273 86 aa11.16□□□□□ -0.62
TRAFD1-201ENST00000257604 DEFB113Q30KQ7 82 aa11.16□□□□□ -0.62
TRAFD1-201ENST00000257604 SFTA2Q6UW10 78 aa11.16□□□□□ -0.62
TRAFD1-201ENST00000257604 A0A0G2JLM5 398 aa11.15□□□□□ -0.62
TRAFD1-201ENST00000257604 FAM223BA6NKX1 122 aa11.15□□□□□ -0.62
TRAFD1-201ENST00000257604 FABP5P3A8MUU1 101 aa11.15□□□□□ -0.62
TRAFD1-201ENST00000257604 ZNF688P0C7X2 276 aa11.15□□□□□ -0.62
TRAFD1-201ENST00000257604 FAM223AQ8IWN6 122 aa11.15□□□□□ -0.62
TRAFD1-201ENST00000257604 NPYP01303 97 aa11.15□□□□□ -0.62
TRAFD1-201ENST00000257604 CKS2P33552 79 aa11.15□□□□□ -0.62
TRAFD1-201ENST00000257604 RNASE4P34096 147 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-201ENST00000257604 C18orf65Q6ZTR6 163 aa11.15□□□□□ -0.62
TRAFD1-201ENST00000257604 M0R381 172 aa11.14□□□□□ -0.63
TRAFD1-201ENST00000257604 S100A4P26447 101 aaKnown RBP11.14□□□□□ -0.63
TRAFD1-201ENST00000257604 TRAV26-2A0A0B4J265 109 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms