RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 PRAC2D3DTV9 90 aa9.65□□□□□ -0.86
USP30-201ENST00000257548 IGLV2-11P01706 119 aa9.65□□□□□ -0.86
USP30-201ENST00000257548 RNASE4P34096 147 aaKnown RBP9.65□□□□□ -0.86
USP30-201ENST00000257548 FOXI1Q12951 378 aa9.65□□□□□ -0.86
USP30-201ENST00000257548 SMIM20Q8N5G0 67 aa9.65□□□□□ -0.86
USP30-201ENST00000257548 KIR2DL4Q99706 377 aa9.65□□□□□ -0.86
USP30-201ENST00000257548 TLN2Q9Y4G6 2542 aa9.65□□□□□ -0.86
USP30-201ENST00000257548 PTPRBP23467 1997 aa9.65□□□□□ -0.86
USP30-201ENST00000257548 IGLV2-23P01705 113 aa9.65□□□□□ -0.86
USP30-201ENST00000257548 CD3EP07766 207 aa9.65□□□□□ -0.86
USP30-201ENST00000257548 C15orf32Q32M92 178 aa9.65□□□□□ -0.86
USP30-201ENST00000257548 H3BRN7 92 aa9.65□□□□□ -0.87
USP30-201ENST00000257548 C2orf66Q6UXQ4 117 aa9.65□□□□□ -0.87
USP30-201ENST00000257548 METTL26Q96S19 204 aa9.65□□□□□ -0.87
USP30-201ENST00000257548 FAM208BQ5VWN6 2430 aa9.64□□□□□ -0.87
USP30-201ENST00000257548 IGKV3D-20A0A0C4DH25 116 aa9.64□□□□□ -0.87
USP30-201ENST00000257548 TEX36Q5VZQ5 186 aa9.64□□□□□ -0.87
USP30-201ENST00000257548 CFHR4Q92496 578 aa9.64□□□□□ -0.87
USP30-201ENST00000257548 CD59P13987 128 aa9.64□□□□□ -0.87
USP30-201ENST00000257548 DEFB1P60022 68 aa9.64□□□□□ -0.87
USP30-201ENST00000257548 LYPD1Q8N2G4 141 aa9.64□□□□□ -0.87
USP30-201ENST00000257548 F8VRH5 84 aa9.64□□□□□ -0.87
USP30-201ENST00000257548 Q8N8P6 123 aa9.64□□□□□ -0.87
USP30-201ENST00000257548 ACACBO00763 2458 aa9.63□□□□□ -0.87
USP30-201ENST00000257548 K7EIM0 57 aa9.63□□□□□ -0.87
USP30-201ENST00000257548 IGHV3-11P01762 117 aa9.63□□□□□ -0.87
USP30-201ENST00000257548 CR1LQ2VPA4 569 aa9.63□□□□□ -0.87
USP30-201ENST00000257548 TMEM14CQ9P0S9 112 aa9.63□□□□□ -0.87
USP30-201ENST00000257548 A0A087WWL8 130 aa9.63□□□□□ -0.87
USP30-201ENST00000257548 ADARB2-AS1A8MUL3 147 aa9.63□□□□□ -0.87
USP30-201ENST00000257548 E9PLD3 99 aa9.63□□□□□ -0.87
USP30-201ENST00000257548 TMEM95Q3KNT9 176 aa9.63□□□□□ -0.87
USP30-201ENST00000257548 OR10J6PQ8NGY7 276 aa9.63□□□□□ -0.87
USP30-201ENST00000257548 DKK4Q9UBT3 224 aa9.63□□□□□ -0.87
USP30-201ENST00000257548 PPDPFLQ8WWR9 84 aa9.62□□□□□ -0.87
USP30-201ENST00000257548 RPL39LQ96EH5 51 aaKnown RBP9.62□□□□□ -0.87
USP30-201ENST00000257548 USP9YO00507 2555 aaPredicted RBP9.62□□□□□ -0.87
USP30-201ENST00000257548 ZNF56Q15929 161 aa9.62□□□□□ -0.87
USP30-201ENST00000257548 PSMG4Q5JS54 123 aa9.62□□□□□ -0.87
USP30-201ENST00000257548 I3L2K1 104 aa9.62□□□□□ -0.87
USP30-201ENST00000257548 IGHG3P01860 377 aa9.62□□□□□ -0.87
USP30-201ENST00000257548 GATA4P43694 442 aa9.62□□□□□ -0.87
USP30-201ENST00000257548 A0A087WX48 190 aa9.61□□□□□ -0.87
USP30-201ENST00000257548 K7EM74 188 aa9.61□□□□□ -0.87
USP30-201ENST00000257548 ORMDL2Q53FV1 153 aa9.61□□□□□ -0.87
USP30-201ENST00000257548 C1QTNF4Q9BXJ3 329 aa9.61□□□□□ -0.87
USP30-201ENST00000257548 ASIPP42127 132 aa9.61□□□□□ -0.87
USP30-201ENST00000257548 SUMO2P61956 95 aaKnown RBP9.61□□□□□ -0.87
USP30-201ENST00000257548 NTN5Q8WTR8 489 aaPredicted RBP9.61□□□□□ -0.87
USP30-201ENST00000257548 ERG28Q9UKR5 140 aa9.61□□□□□ -0.87
USP30-201ENST00000257548 DCHS2Q6V1P9 2916 aa9.6□□□□□ -0.87
USP30-201ENST00000257548 SCGB1A1P11684 91 aa9.6□□□□□ -0.87
USP30-201ENST00000257548 TSPAN13O95857 204 aa9.6□□□□□ -0.87
USP30-201ENST00000257548 TEX22C9J3V5 150 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 CRYGCP07315 174 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 TCF15Q12870 199 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 C5orf64Q2M2E5 130 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 OR11H6Q8NGC7 330 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 AGPAT4-IT1Q9H0P7 198 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 HHLA3Q9XRX5 114 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 TMEM262E9PQX1 116 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 XGP55808 180 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 PDE6HQ13956 83 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 Q6ZUT4 128 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 HIGD1BQ9P298 99 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 SLC25A20O43772 301 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 Q6ZQT7 251 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 PIP4P2Q8N4L2 257 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 SMIM2Q9BVW6 85 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 TP53TG1Q9Y2A0 90 aa9.59□□□□□ -0.87
USP30-201ENST00000257548 G3V318 75 aa9.58□□□□□ -0.88
USP30-201ENST00000257548 COX6CP09669 75 aa9.58□□□□□ -0.88
USP30-201ENST00000257548 GATA3P23771 443 aa9.58□□□□□ -0.88
USP30-201ENST00000257548 SEM1Q6ZVN7 128 aa9.58□□□□□ -0.88
USP30-201ENST00000257548 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.58□□□□□ -0.88
USP30-201ENST00000257548 WI2-2373I1.2A0A1W2PRP0 233 aa9.58□□□□□ -0.88
USP30-201ENST00000257548 GAGE5Q13069 117 aa9.58□□□□□ -0.88
USP30-201ENST00000257548 GAGE6Q13070 117 aa9.58□□□□□ -0.88
USP30-201ENST00000257548 ZNF493Q6ZR52 646 aa9.58□□□□□ -0.88
USP30-201ENST00000257548 FAM215AQ9Y5M1 114 aa9.58□□□□□ -0.88
USP30-201ENST00000257548 TRAV8-4A0A0B4J246 113 aa9.58□□□□□ -0.88
USP30-201ENST00000257548 ZNF688P0C7X2 276 aa9.58□□□□□ -0.88
USP30-201ENST00000257548 FAM159AQ6UWV7 190 aa9.58□□□□□ -0.88
USP30-201ENST00000257548 TRPT1Q86TN4 253 aaKnown RBP9.58□□□□□ -0.88
USP30-201ENST00000257548 PLEKHB2Q96CS7 222 aa9.58□□□□□ -0.88
USP30-201ENST00000257548 TM2D2Q9BX73 214 aa9.58□□□□□ -0.88
USP30-201ENST00000257548 CD7P09564 240 aa9.57□□□□□ -0.88
USP30-201ENST00000257548 TMEM219Q86XT9 240 aa9.57□□□□□ -0.88
USP30-201ENST00000257548 ANKRD29Q8N6D5 301 aa9.57□□□□□ -0.88
USP30-201ENST00000257548 LINC00477Q96M19 166 aa9.57□□□□□ -0.88
USP30-201ENST00000257548 MBD3L4A6NDZ8 208 aaPredicted RBP9.57□□□□□ -0.88
USP30-201ENST00000257548 MBD3L3A6NE82 208 aaPredicted RBP9.57□□□□□ -0.88
USP30-201ENST00000257548 MBD3L5A6NJ08 208 aaPredicted RBP9.57□□□□□ -0.88
USP30-201ENST00000257548 F6UB75 175 aa9.57□□□□□ -0.88
USP30-201ENST00000257548 FSTL3O95633 263 aa9.57□□□□□ -0.88
USP30-201ENST00000257548 PF4V1P10720 104 aa9.57□□□□□ -0.88
USP30-201ENST00000257548 LY6EQ16553 131 aa9.57□□□□□ -0.88
USP30-201ENST00000257548 MBD3L2Q8NHZ7 208 aaPredicted RBP9.57□□□□□ -0.88
USP30-201ENST00000257548 DGAT2L7PQ6IED9 249 aa9.57□□□□□ -0.88
USP30-201ENST00000257548 SPXQ9BT56 116 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms