RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 HIST1H1AQ02539 215 aaPredicted RBP6.97□□□□□ -1.29
SYDE2-201ENST00000234668 GTSCR1Q86UQ5 136 aa6.97□□□□□ -1.29
SYDE2-201ENST00000234668 CCL19Q99731 98 aa6.97□□□□□ -1.29
SYDE2-201ENST00000234668 FOXC2Q99958 501 aa6.97□□□□□ -1.29
SYDE2-201ENST00000234668 IGHV7-4-1A0A0J9YVY3 117 aa6.96□□□□□ -1.29
SYDE2-201ENST00000234668 RNASE4P34096 147 aaKnown RBP6.96□□□□□ -1.29
SYDE2-201ENST00000234668 RNF151Q2KHN1 245 aa6.96□□□□□ -1.29
SYDE2-201ENST00000234668 LINC01559Q495D7 138 aa6.96□□□□□ -1.29
SYDE2-201ENST00000234668 HIST2H2BDQ6DRA6 164 aa6.96□□□□□ -1.29
SYDE2-201ENST00000234668 GPHB5Q86YW7 130 aa6.96□□□□□ -1.29
SYDE2-201ENST00000234668 SPOCK3Q9BQ16 436 aa6.96□□□□□ -1.29
SYDE2-201ENST00000234668 MS4A6AQ9H2W1 248 aa6.96□□□□□ -1.29
SYDE2-201ENST00000234668 TMEM160Q9NX00 188 aa6.96□□□□□ -1.29
SYDE2-201ENST00000234668 FGF6P10767 208 aa6.96□□□□□ -1.3
SYDE2-201ENST00000234668 COX8CQ7Z4L0 72 aa6.96□□□□□ -1.3
SYDE2-201ENST00000234668 SLC50A1Q9BRV3 221 aa6.96□□□□□ -1.3
SYDE2-201ENST00000234668 S100A4P26447 101 aaKnown RBP6.95□□□□□ -1.3
SYDE2-201ENST00000234668 TMEM97Q5BJF2 176 aa6.95□□□□□ -1.3
SYDE2-201ENST00000234668 C12orf54Q6X4T0 127 aa6.95□□□□□ -1.3
SYDE2-201ENST00000234668 NEGR1Q7Z3B1 354 aa6.95□□□□□ -1.3
SYDE2-201ENST00000234668 DEFB125Q8N687 156 aa6.95□□□□□ -1.3
SYDE2-201ENST00000234668 C14orf178Q8N769 122 aaPredicted RBP6.95□□□□□ -1.3
SYDE2-201ENST00000234668 OR2K2Q8NGT1 345 aa6.95□□□□□ -1.3
SYDE2-201ENST00000234668 OR4X2Q8NGF9 303 aa6.95□□□□□ -1.3
SYDE2-201ENST00000234668 LGALS9BQ3B8N2 356 aa6.95□□□□□ -1.3
SYDE2-201ENST00000234668 LGALS9CQ6DKI2 356 aa6.95□□□□□ -1.3
SYDE2-201ENST00000234668 RPL39LQ96EH5 51 aaKnown RBP6.95□□□□□ -1.3
SYDE2-201ENST00000234668 PRORYQ9H606 182 aa6.95□□□□□ -1.3
SYDE2-201ENST00000234668 ZNF469Q96JG9 3925 aaPredicted RBP6.95□□□□□ -1.3
SYDE2-201ENST00000234668 MGPP08493 103 aa6.94□□□□□ -1.3
SYDE2-201ENST00000234668 SMIM17P0DL12 118 aa6.94□□□□□ -1.3
SYDE2-201ENST00000234668 DUX5Q96PT3 197 aa6.94□□□□□ -1.3
SYDE2-201ENST00000234668 ANXA2RQ3ZCQ2 193 aa6.94□□□□□ -1.3
SYDE2-201ENST00000234668 PIMREGQ9BSJ6 248 aa6.94□□□□□ -1.3
SYDE2-201ENST00000234668 RHPN1-AS1Q9BWJ2 59 aa6.94□□□□□ -1.3
SYDE2-201ENST00000234668 JPT2Q9H910 190 aa6.94□□□□□ -1.3
SYDE2-201ENST00000234668 U3KQE9 123 aa6.94□□□□□ -1.3
SYDE2-201ENST00000234668 NIPBLQ6KC79 2804 aaeCLIP6.93□□□□□ -1.3
SYDE2-201ENST00000234668 TMEM8BA6NDV4 472 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 CD5LO43866 347 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 PRB1P04280 392 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 FCER1GP30273 86 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 RAB9AP51151 201 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 C2CD3Q4AC94 2353 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 A1L4Q6 167 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 H3BUT2 72 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 ODF1Q14990 250 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 CLEC2AQ6UVW9 174 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 C9orf47Q6ZRZ4 202 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 SMIM15Q7Z3B0 74 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 C10orf105Q8TEF2 133 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 NPFFR1Q9GZQ6 430 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 MRPL35Q9NZE8 188 aaKnown RBP6.93□□□□□ -1.3
SYDE2-201ENST00000234668 NBPF19A0A087WUL8 3843 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 S100A7P31151 101 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 ZC2HC1BQ5TFG8 222 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 BOD1L2Q8IYS8 172 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 ZFAND2AQ8N6M9 145 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 NRACQ8N912 160 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 OR10J6PQ8NGY7 276 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 CNFNQ9BYD5 112 aa6.93□□□□□ -1.3
SYDE2-201ENST00000234668 RBAKDNA6NC62 111 aa6.92□□□□□ -1.3
SYDE2-201ENST00000234668 GCSHP23434 173 aa6.92□□□□□ -1.3
SYDE2-201ENST00000234668 HHLA3Q9XRX5 114 aa6.92□□□□□ -1.3
SYDE2-201ENST00000234668 MUC4Q99102 2169 aa6.92□□□□□ -1.3
SYDE2-201ENST00000234668 IGLV2-18A0A075B6J9 118 aa6.92□□□□□ -1.3
SYDE2-201ENST00000234668 K7ERJ3 54 aa6.92□□□□□ -1.3
SYDE2-201ENST00000234668 IGHV4-59P01825 116 aa6.92□□□□□ -1.3
SYDE2-201ENST00000234668 PPBPP02775 128 aa6.92□□□□□ -1.3
SYDE2-201ENST00000234668 PHLDA3Q9Y5J5 127 aa6.92□□□□□ -1.3
SYDE2-201ENST00000234668 USP24Q9UPU5 2620 aa6.92□□□□□ -1.3
SYDE2-201ENST00000234668 C19orf54Q5BKX5 351 aa6.91□□□□□ -1.3
SYDE2-201ENST00000234668 Q8N8P6 123 aa6.91□□□□□ -1.3
SYDE2-201ENST00000234668 JMJD8Q96S16 334 aa6.91□□□□□ -1.3
SYDE2-201ENST00000234668 NXT2Q9NPJ8 142 aaKnown RBP6.91□□□□□ -1.3
SYDE2-201ENST00000234668 CHD6Q8TD26 2715 aa6.91□□□□□ -1.3
SYDE2-201ENST00000234668 ACANP16112 2415 aa6.91□□□□□ -1.3
SYDE2-201ENST00000234668 TRAV12-2A0A075B6T6 113 aa6.91□□□□□ -1.3
SYDE2-201ENST00000234668 EMP1P54849 157 aa6.91□□□□□ -1.3
SYDE2-201ENST00000234668 ARL6IP6Q8N6S5 226 aa6.91□□□□□ -1.3
SYDE2-201ENST00000234668 MAPKAPK5-AS1Q8N8E1 139 aa6.91□□□□□ -1.3
SYDE2-201ENST00000234668 NACAE9PAV3 2078 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 A0A087WWL8 130 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 FAM223BA6NKX1 122 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 IGKCP01834 107 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 IGHG2P01859 326 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 MSMBP08118 114 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 ZNF688P0C7X2 276 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 LAGE3Q14657 143 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 FAM223AQ8IWN6 122 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 TRAV12-3A0A0B4J271 114 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 A6NDX4 124 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 FXYD2P54710 66 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 ADAMTSL5Q6ZMM2 481 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 C9orf139Q6ZV77 190 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 MYOZ3Q8TDC0 251 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 DPF1Q92782 380 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 MEGF9Q9H1U4 602 aa6.9□□□□□ -1.3
SYDE2-201ENST00000234668 PRRC2AP48634 2157 aaKnown RBP6.9□□□□□ -1.31
SYDE2-201ENST00000234668 MTORP42345 2549 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms