RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 MED14OSP0DP75 135 aa16.53■□□□□ 0.24
GCA-201ENST00000233612 DEFB114Q30KQ6 69 aa16.53■□□□□ 0.24
GCA-201ENST00000233612 CITED2Q99967 270 aaPredicted RBP16.53■□□□□ 0.24
GCA-201ENST00000233612 ZNF324O75467 553 aaPredicted RBP16.53■□□□□ 0.24
GCA-201ENST00000233612 RNASE4P34096 147 aaKnown RBP16.53■□□□□ 0.24
GCA-201ENST00000233612 LEPP41159 167 aa16.53■□□□□ 0.24
GCA-201ENST00000233612 PROK1P58294 105 aa16.53■□□□□ 0.24
GCA-201ENST00000233612 CACNG7P62955 275 aa16.53■□□□□ 0.24
GCA-201ENST00000233612 NIT1Q86X76 327 aa16.53■□□□□ 0.24
GCA-201ENST00000233612 URB1-AS1Q96HZ7 61 aa16.53■□□□□ 0.24
GCA-201ENST00000233612 SAMD10Q9BYL1 202 aa16.53■□□□□ 0.24
GCA-201ENST00000233612 CHCHD1Q96BP2 118 aaKnown RBP16.52■□□□□ 0.23
GCA-201ENST00000233612 NOTCH2Q04721 2471 aa16.51■□□□□ 0.23
GCA-201ENST00000233612 TRAV25A0A0B4J276 109 aa16.51■□□□□ 0.23
GCA-201ENST00000233612 PRR31Q5SQ13 230 aa16.51■□□□□ 0.23
GCA-201ENST00000233612 RNF114Q9Y508 228 aa16.51■□□□□ 0.23
GCA-201ENST00000233612 A8MTW9 85 aa16.5■□□□□ 0.23
GCA-201ENST00000233612 S100A12P80511 92 aa16.5■□□□□ 0.23
GCA-201ENST00000233612 TMEM61Q8N0U2 210 aa16.5■□□□□ 0.23
GCA-201ENST00000233612 MSRB1Q9NZV6 116 aa16.5■□□□□ 0.23
GCA-201ENST00000233612 MUC21A0A0G2JKD1 596 aa16.5■□□□□ 0.23
GCA-201ENST00000233612 MUC21A0A140T8X8 626 aa16.5■□□□□ 0.23
GCA-201ENST00000233612 AMTP48728 403 aa16.5■□□□□ 0.23
GCA-201ENST00000233612 KIR3DS1Q14943 382 aa16.5■□□□□ 0.23
GCA-201ENST00000233612 ANXA2RQ3ZCQ2 193 aa16.5■□□□□ 0.23
GCA-201ENST00000233612 MUC21Q5SSG8 566 aa16.5■□□□□ 0.23
GCA-201ENST00000233612 Q6ZWC4 215 aa16.5■□□□□ 0.23
GCA-201ENST00000233612 AMN1Q8IY45 258 aa16.5■□□□□ 0.23
GCA-201ENST00000233612 J3KRW8 73 aa16.49■□□□□ 0.23
GCA-201ENST00000233612 CD33P20138 364 aa16.49■□□□□ 0.23
GCA-201ENST00000233612 MRPL51Q4U2R6 128 aaKnown RBP16.49■□□□□ 0.23
GCA-201ENST00000233612 SCRT2Q9NQ03 307 aa16.49■□□□□ 0.23
GCA-201ENST00000233612 HSBP1O75506 76 aa16.48■□□□□ 0.23
GCA-201ENST00000233612 LINC00614P0C842 121 aa16.48■□□□□ 0.23
GCA-201ENST00000233612 RAB4AP20338 218 aa16.48■□□□□ 0.23
GCA-201ENST00000233612 TSPOP30536 169 aa16.48■□□□□ 0.23
GCA-201ENST00000233612 ORMDL3Q8N138 153 aa16.48■□□□□ 0.23
GCA-201ENST00000233612 C11orf44Q8N8P7 122 aa16.48■□□□□ 0.23
GCA-201ENST00000233612 OR10AG1Q8NH19 301 aa16.48■□□□□ 0.23
GCA-201ENST00000233612 DYNLRB2Q8TF09 96 aa16.48■□□□□ 0.23
GCA-201ENST00000233612 RNF185Q96GF1 192 aa16.48■□□□□ 0.23
GCA-201ENST00000233612 PPBPP02775 128 aa16.47■□□□□ 0.23
GCA-201ENST00000233612 TDRG1Q3Y452 100 aa16.47■□□□□ 0.23
GCA-201ENST00000233612 CDPF1Q6NVV7 123 aa16.47■□□□□ 0.23
GCA-201ENST00000233612 SPAG8Q99932 426 aaPredicted RBP16.47■□□□□ 0.23
GCA-201ENST00000233612 C7orf71A4D174 169 aa16.46■□□□□ 0.23
GCA-201ENST00000233612 ASIPP42127 132 aa16.46■□□□□ 0.23
GCA-201ENST00000233612 HIST2H2BDQ6DRA6 164 aa16.46■□□□□ 0.23
GCA-201ENST00000233612 AMTNQ6UX39 209 aa16.46■□□□□ 0.23
GCA-201ENST00000233612 D6R8Y8 96 aa16.46■□□□□ 0.23
GCA-201ENST00000233612 PMCHP20382 165 aa16.46■□□□□ 0.23
GCA-201ENST00000233612 CDKN1BP46527 198 aa16.46■□□□□ 0.23
GCA-201ENST00000233612 SSTP61278 116 aa16.46■□□□□ 0.23
GCA-201ENST00000233612 GSN-AS1Q9NRJ2 163 aa16.46■□□□□ 0.23
GCA-201ENST00000233612 A0A1W2PRX2 142 aa16.45■□□□□ 0.22
GCA-201ENST00000233612 ADARB2-AS1A8MUL3 147 aa16.45■□□□□ 0.22
GCA-201ENST00000233612 INAFM1C9JVW0 142 aa16.45■□□□□ 0.22
GCA-201ENST00000233612 TCF21O43680 179 aa16.45■□□□□ 0.22
GCA-201ENST00000233612 RNASEKQ6P5S7 137 aaKnown RBP16.45■□□□□ 0.22
GCA-201ENST00000233612 NAGKQ9UJ70 344 aa16.45■□□□□ 0.22
GCA-201ENST00000233612 LAMTOR2Q9Y2Q5 125 aa16.45■□□□□ 0.22
GCA-201ENST00000233612 OR4C46A6NHA9 309 aa16.44■□□□□ 0.22
GCA-201ENST00000233612 H3BVH4 76 aa16.44■□□□□ 0.22
GCA-201ENST00000233612 HLA-DRB4P13762 266 aa16.44■□□□□ 0.22
GCA-201ENST00000233612 CD300EQ496F6 205 aaPredicted RBP16.44■□□□□ 0.22
GCA-201ENST00000233612 PRELID3AQ96N28 172 aa16.44■□□□□ 0.22
GCA-201ENST00000233612 ZNF256Q9Y2P7 627 aaPredicted RBP16.44■□□□□ 0.22
GCA-201ENST00000233612 HLA-DRB4X5D2U9 266 aa16.44■□□□□ 0.22
GCA-201ENST00000233612 DEFB131AP59861 70 aa16.43■□□□□ 0.22
GCA-201ENST00000233612 SPANXN1Q5VSR9 72 aa16.43■□□□□ 0.22
GCA-201ENST00000233612 FAM159AQ6UWV7 190 aa16.43■□□□□ 0.22
GCA-201ENST00000233612 SMIM15Q7Z3B0 74 aa16.43■□□□□ 0.22
GCA-201ENST00000233612 FAM19A2Q8N3H0 131 aa16.43■□□□□ 0.22
GCA-201ENST00000233612 GNRH2O43555 120 aa16.43■□□□□ 0.22
GCA-201ENST00000233612 RNASE3P12724 160 aaKnown RBP16.43■□□□□ 0.22
GCA-201ENST00000233612 S100A4P26447 101 aaKnown RBP16.43■□□□□ 0.22
GCA-201ENST00000233612 CKS2P33552 79 aa16.43■□□□□ 0.22
GCA-201ENST00000233612 SORL1Q92673 2214 aa16.42■□□□□ 0.22
GCA-201ENST00000233612 H3BMM0 161 aa16.42■□□□□ 0.22
GCA-201ENST00000233612 CLUHP3Q96NS8 147 aa16.42■□□□□ 0.22
GCA-201ENST00000233612 TRAV12-3A0A0B4J271 114 aa16.41■□□□□ 0.22
GCA-201ENST00000233612 NXPH4O95158 308 aa16.41■□□□□ 0.22
GCA-201ENST00000233612 MAP6D1Q9H9H5 199 aa16.41■□□□□ 0.22
GCA-201ENST00000233612 PCP4L1A6NKN8 68 aa16.4■□□□□ 0.22
GCA-201ENST00000233612 M0R2Z0 102 aa16.4■□□□□ 0.22
GCA-201ENST00000233612 AGRNO00468 2067 aa16.4■□□□□ 0.22
GCA-201ENST00000233612 SCGB1D1O95968 90 aa16.4■□□□□ 0.22
GCA-201ENST00000233612 EVI2AP22794 236 aa16.4■□□□□ 0.22
GCA-201ENST00000233612 PHLDA3Q9Y5J5 127 aa16.4■□□□□ 0.22
GCA-201ENST00000233612 CRLF1O75462 422 aa16.39■□□□□ 0.21
GCA-201ENST00000233612 DEFB125Q8N687 156 aa16.39■□□□□ 0.21
GCA-201ENST00000233612 PRSS3P2Q8NHM4 247 aa16.39■□□□□ 0.21
GCA-201ENST00000233612 IGHV1-24A0A0C4DH33 117 aa16.38■□□□□ 0.21
GCA-201ENST00000233612 IGKV3-20P01619 116 aa16.38■□□□□ 0.21
GCA-201ENST00000233612 SPINK13Q1W4C9 94 aa16.38■□□□□ 0.21
GCA-201ENST00000233612 NDUFA11Q86Y39 141 aa16.38■□□□□ 0.21
GCA-201ENST00000233612 AP5S1Q9NUS5 200 aa16.38■□□□□ 0.21
GCA-201ENST00000233612 NSD1Q96L73 2696 aaPredicted RBP16.38■□□□□ 0.21
GCA-201ENST00000233612 KNCNA6PVL3 124 aa16.37■□□□□ 0.21
GCA-201ENST00000233612 PRSS47A8MTI9 375 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms