RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 H3BT86 120 aa10.02□□□□□ -0.81
MSH2-201ENST00000233146 SHANK2-AS3Q9BTD1 123 aa10.02□□□□□ -0.81
MSH2-201ENST00000233146 BDP1A6H8Y1 2624 aa10.02□□□□□ -0.81
MSH2-201ENST00000233146 PINLYPA6NC86 204 aa10.02□□□□□ -0.81
MSH2-201ENST00000233146 SRRM5B3KS81 715 aa10.02□□□□□ -0.81
MSH2-201ENST00000233146 MAGEA5P43359 124 aa10.02□□□□□ -0.81
MSH2-201ENST00000233146 MZT1Q08AG7 82 aa10.02□□□□□ -0.81
MSH2-201ENST00000233146 ERCC8Q13216 396 aa10.02□□□□□ -0.81
MSH2-201ENST00000233146 Q5XG85 94 aa10.02□□□□□ -0.81
MSH2-201ENST00000233146 IL17RELQ6ZVW7 336 aa10.02□□□□□ -0.81
MSH2-201ENST00000233146 PI4KAP42356 2102 aa10.02□□□□□ -0.81
MSH2-201ENST00000233146 HERVK_113P61574 105 aa10.01□□□□□ -0.81
MSH2-201ENST00000233146 ZNF833PQ6ZTB9 187 aa10.01□□□□□ -0.81
MSH2-201ENST00000233146 METTL26Q96S19 204 aa10.01□□□□□ -0.81
MSH2-201ENST00000233146 H7C2G1 150 aa10.01□□□□□ -0.81
MSH2-201ENST00000233146 HRCT1Q6UXD1 115 aa10.01□□□□□ -0.81
MSH2-201ENST00000233146 FREM2Q5SZK8 3169 aa10.01□□□□□ -0.81
MSH2-201ENST00000233146 TRBV30A0A0K0K1B3 111 aa10□□□□□ -0.81
MSH2-201ENST00000233146 OXTP01178 125 aa10□□□□□ -0.81
MSH2-201ENST00000233146 ZNF883P0CG24 379 aa10□□□□□ -0.81
MSH2-201ENST00000233146 A0A0G2JNJ9 132 aa10□□□□□ -0.81
MSH2-201ENST00000233146 H3BRN7 92 aa10□□□□□ -0.81
MSH2-201ENST00000233146 CRYGDP07320 174 aa10□□□□□ -0.81
MSH2-201ENST00000233146 NXPH1P58417 271 aa10□□□□□ -0.81
MSH2-201ENST00000233146 DEFB119Q8N690 84 aa10□□□□□ -0.81
MSH2-201ENST00000233146 KLK15Q9H2R5 256 aa10□□□□□ -0.81
MSH2-201ENST00000233146 Q9UFV3 132 aa10□□□□□ -0.81
MSH2-201ENST00000233146 PLXNB1O43157 2135 aa10□□□□□ -0.81
MSH2-201ENST00000233146 CRYGBP07316 175 aa10□□□□□ -0.81
MSH2-201ENST00000233146 WT1P19544 449 aaPredicted RBP10□□□□□ -0.81
MSH2-201ENST00000233146 TRAV26-2A0A0B4J265 109 aa9.99□□□□□ -0.81
MSH2-201ENST00000233146 C17orf100A8MU93 164 aa9.99□□□□□ -0.81
MSH2-201ENST00000233146 ORM1P02763 201 aa9.99□□□□□ -0.81
MSH2-201ENST00000233146 TRGV3P03979 118 aa9.99□□□□□ -0.81
MSH2-201ENST00000233146 ASCL5Q7RTU5 278 aa9.99□□□□□ -0.81
MSH2-201ENST00000233146 IGLV2-23P01705 113 aa9.99□□□□□ -0.81
MSH2-201ENST00000233146 ORMDL2Q53FV1 153 aa9.99□□□□□ -0.81
MSH2-201ENST00000233146 AMELXQ99217 191 aa9.99□□□□□ -0.81
MSH2-201ENST00000233146 ASPMQ8IZT6 3477 aa9.99□□□□□ -0.81
MSH2-201ENST00000233146 TIMM8AO60220 97 aaPredicted RBP9.99□□□□□ -0.81
MSH2-201ENST00000233146 ACYP1P07311 99 aa9.99□□□□□ -0.81
MSH2-201ENST00000233146 TSPEAR-AS2P59090 65 aa9.99□□□□□ -0.81
MSH2-201ENST00000233146 SMIM2Q9BVW6 85 aa9.99□□□□□ -0.81
MSH2-201ENST00000233146 LINC00574Q9H8X3 128 aa9.99□□□□□ -0.81
MSH2-201ENST00000233146 MSRB2Q9Y3D2 182 aa9.99□□□□□ -0.81
MSH2-201ENST00000233146 CACNA1HO95180 2353 aa9.98□□□□□ -0.81
MSH2-201ENST00000233146 ZNF318Q5VUA4 2279 aa9.98□□□□□ -0.81
MSH2-201ENST00000233146 IGKV2-40A0A087WW87 121 aaPredicted RBP9.98□□□□□ -0.81
MSH2-201ENST00000233146 C5orf67F2Z3F1 127 aa9.98□□□□□ -0.81
MSH2-201ENST00000233146 IGKV2D-40P01614 121 aaPredicted RBP9.98□□□□□ -0.81
MSH2-201ENST00000233146 GUSBP11Q6P575 273 aa9.98□□□□□ -0.81
MSH2-201ENST00000233146 TRIAP1O43715 76 aa9.98□□□□□ -0.81
MSH2-201ENST00000233146 PDE6HQ13956 83 aa9.98□□□□□ -0.81
MSH2-201ENST00000233146 MRGPRG-AS1Q2M3A8 158 aa9.98□□□□□ -0.81
MSH2-201ENST00000233146 C14orf178Q8N769 122 aaPredicted RBP9.98□□□□□ -0.81
MSH2-201ENST00000233146 ZNF256Q9Y2P7 627 aaPredicted RBP9.98□□□□□ -0.81
MSH2-201ENST00000233146 RP1L1Q8IWN7 2480 aaPredicted RBP9.98□□□□□ -0.81
MSH2-201ENST00000233146 hADV29S1A0JD25 119 aa9.97□□□□□ -0.81
MSH2-201ENST00000233146 MBD3L4A6NDZ8 208 aaPredicted RBP9.97□□□□□ -0.81
MSH2-201ENST00000233146 MBD3L3A6NE82 208 aaPredicted RBP9.97□□□□□ -0.81
MSH2-201ENST00000233146 MBD3L5A6NJ08 208 aaPredicted RBP9.97□□□□□ -0.81
MSH2-201ENST00000233146 TRACP01848 142 aa9.97□□□□□ -0.81
MSH2-201ENST00000233146 CYSTM1Q9H1C7 97 aa9.97□□□□□ -0.81
MSH2-201ENST00000233146 C11orf86A6NJI1 115 aa9.97□□□□□ -0.81
MSH2-201ENST00000233146 TMEM258P61165 79 aa9.97□□□□□ -0.81
MSH2-201ENST00000233146 Q1RN00 199 aa9.97□□□□□ -0.81
MSH2-201ENST00000233146 LINC00643Q86TS7 51 aa9.97□□□□□ -0.81
MSH2-201ENST00000233146 C5orf38Q86SI9 138 aa9.97□□□□□ -0.81
MSH2-201ENST00000233146 SMCR5Q8TEV8 140 aa9.97□□□□□ -0.81
MSH2-201ENST00000233146 DSCAMO60469 2012 aa9.96□□□□□ -0.81
MSH2-201ENST00000233146 Q8TAT8 98 aa9.96□□□□□ -0.81
MSH2-201ENST00000233146 TPSG1Q9NRR2 321 aa9.96□□□□□ -0.81
MSH2-201ENST00000233146 BEX4Q9NWD9 120 aaPredicted RBP9.96□□□□□ -0.81
MSH2-201ENST00000233146 ABCA1O95477 2261 aa9.96□□□□□ -0.82
MSH2-201ENST00000233146 IGLV4-69A0A075B6H9 119 aa9.96□□□□□ -0.82
MSH2-201ENST00000233146 ZGRF1Q86YA3 2104 aa9.96□□□□□ -0.82
MSH2-201ENST00000233146 IGKV1-17P01599 117 aa9.95□□□□□ -0.82
MSH2-201ENST00000233146 CXCL5P42830 114 aa9.95□□□□□ -0.82
MSH2-201ENST00000233146 PRR14LQ5THK1 2151 aa9.95□□□□□ -0.82
MSH2-201ENST00000233146 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.95□□□□□ -0.82
MSH2-201ENST00000233146 TMEM30BQ3MIR4 351 aa9.95□□□□□ -0.82
MSH2-201ENST00000233146 PAPPA-AS1Q5QFB9 102 aa9.95□□□□□ -0.82
MSH2-201ENST00000233146 C2orf66Q6UXQ4 117 aa9.95□□□□□ -0.82
MSH2-201ENST00000233146 SDIM1Q6ZPB5 146 aa9.95□□□□□ -0.82
MSH2-201ENST00000233146 TMEM223A0PJW6 202 aa9.94□□□□□ -0.82
MSH2-201ENST00000233146 HIST1H4AP62805 103 aaKnown RBP9.94□□□□□ -0.82
MSH2-201ENST00000233146 SLC25A45Q8N413 288 aa9.94□□□□□ -0.82
MSH2-201ENST00000233146 DUX4L9Q6RFH8 374 aaPredicted RBP9.94□□□□□ -0.82
MSH2-201ENST00000233146 MUSTN1Q8IVN3 82 aa9.94□□□□□ -0.82
MSH2-201ENST00000233146 SIT1Q9Y3P8 196 aa9.94□□□□□ -0.82
MSH2-201ENST00000233146 FAM186AA6NE01 2351 aa9.94□□□□□ -0.82
MSH2-201ENST00000233146 TRAV41A0A0B4J266 112 aa9.94□□□□□ -0.82
MSH2-201ENST00000233146 DLX6P56179 175 aa9.94□□□□□ -0.82
MSH2-201ENST00000233146 ZFHX2Q9C0A1 2572 aaPredicted RBP9.93□□□□□ -0.82
MSH2-201ENST00000233146 APELAP0DMC3 54 aa9.93□□□□□ -0.82
MSH2-201ENST00000233146 FAM19A4Q96LR4 140 aa9.93□□□□□ -0.82
MSH2-201ENST00000233146 ZNF576Q9H609 170 aa9.93□□□□□ -0.82
MSH2-201ENST00000233146 J3QLI3 93 aa9.92□□□□□ -0.82
MSH2-201ENST00000233146 CNTFRP26992 372 aa9.92□□□□□ -0.82
MSH2-201ENST00000233146 ZNF491Q8N8L2 437 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms