RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 OR11H12B2RN74 326 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 GAS8-AS1O95177 125 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 OR11H1Q8NG94 326 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 OR11H2Q8NH07 326 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 DLX4Q92988 240 aaPredicted RBP7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 FANCD2OSQ96PS1 177 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 MAP1AP78559 2803 aaPredicted RBP7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 COL12A1Q99715 3063 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 F8W735 103 aaPredicted RBP7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 NBR2O15453 112 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 HLA-DMBP28068 263 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 ID1P41134 155 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 RPL32P62910 135 aaKnown RBP7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 NDPQ00604 133 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 Q8TAT8 98 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 CFHR4Q92496 578 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 COL6A6A6NMZ7 2263 aa7.3□□□□□ -1.24
HLA-DOA-201ENST00000229829 TRBV6-1A0A0K0K1D8 114 aa7.3□□□□□ -1.24
HLA-DOA-201ENST00000229829 WI2-2373I1.2A0A1W2PRP0 233 aa7.3□□□□□ -1.24
HLA-DOA-201ENST00000229829 RPL7P18124 248 aaKnown RBP7.3□□□□□ -1.24
HLA-DOA-201ENST00000229829 EFNA4P52798 201 aa7.3□□□□□ -1.24
HLA-DOA-201ENST00000229829 EMP1P54849 157 aa7.3□□□□□ -1.24
HLA-DOA-201ENST00000229829 FHL3Q13643 280 aa7.3□□□□□ -1.24
HLA-DOA-201ENST00000229829 Q1RN00 199 aa7.3□□□□□ -1.24
HLA-DOA-201ENST00000229829 ZNF562Q6V9R5 426 aa7.3□□□□□ -1.24
HLA-DOA-201ENST00000229829 MYOZ3Q8TDC0 251 aa7.3□□□□□ -1.24
HLA-DOA-201ENST00000229829 GAGE12JA6NER3 117 aa7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 GAGE7O76087 117 aa7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 GAGE12FP0CL80 117 aa7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 GAGE12GP0CL81 117 aa7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 GAGE12IP0CL82 117 aa7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 GAGE4Q13068 117 aa7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 CDSNQ15517 529 aa7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 FAM104BQ5XKR9 115 aa7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 DYNAPQ8N1N2 210 aa7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 DPM3Q9P2X0 92 aa7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 SH2D1AO60880 128 aa7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 ZNF80P51504 273 aaPredicted RBP7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 TM2D2Q9BX73 214 aa7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 TSPAN13O95857 204 aa7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 UCNP55089 124 aa7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 RNF5Q99942 180 aa7.29□□□□□ -1.24
HLA-DOA-201ENST00000229829 A8MWV9 139 aa7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 EGR2P11161 476 aaPredicted RBP7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 LYPD1Q8N2G4 141 aa7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 PIMREGQ9BSJ6 248 aa7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 AAMDCQ9H7C9 122 aa7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 IGLV11-55A0A075B6I3 123 aa7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 ZNF575Q86XF7 245 aa7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 GATD1Q8NB37 220 aa7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 LY6G5BQ8NDX9 201 aa7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 PHLDA1Q8WV24 401 aaPredicted RBP7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 RAX2Q96IS3 184 aa7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 Q6AWC8 147 aa7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 FAM159AQ6UWV7 190 aa7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 ZNF493Q6ZR52 646 aa7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 PPDPFLQ8WWR9 84 aa7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 DPF1Q92782 380 aa7.28□□□□□ -1.24
HLA-DOA-201ENST00000229829 CACNA1AO00555 2505 aa7.27□□□□□ -1.25
HLA-DOA-201ENST00000229829 TRAV26-2A0A0B4J265 109 aa7.27□□□□□ -1.25
HLA-DOA-201ENST00000229829 IGHG4P01861 327 aa7.27□□□□□ -1.25
HLA-DOA-201ENST00000229829 SMAD5-AS1Q9Y6J3 95 aa7.27□□□□□ -1.25
HLA-DOA-201ENST00000229829 ZNF815PA8K554 130 aa7.27□□□□□ -1.25
HLA-DOA-201ENST00000229829 C9JAW5 83 aa7.27□□□□□ -1.25
HLA-DOA-201ENST00000229829 MFAP4P55083 255 aa7.27□□□□□ -1.25
HLA-DOA-201ENST00000229829 NPBQ8NG41 125 aa7.27□□□□□ -1.25
HLA-DOA-201ENST00000229829 PRR25Q96S07 402 aa7.27□□□□□ -1.25
HLA-DOA-201ENST00000229829 OR11H6Q8NGC7 330 aa7.26□□□□□ -1.25
HLA-DOA-201ENST00000229829 C21orf62Q9NYP8 219 aa7.26□□□□□ -1.25
HLA-DOA-201ENST00000229829 RAXQ9Y2V3 346 aa7.26□□□□□ -1.25
HLA-DOA-201ENST00000229829 MRPL23Q16540 153 aaKnown RBP7.26□□□□□ -1.25
HLA-DOA-201ENST00000229829 MEIG1Q5JSS6 88 aa7.26□□□□□ -1.25
HLA-DOA-201ENST00000229829 ANKRD29Q8N6D5 301 aa7.26□□□□□ -1.25
HLA-DOA-201ENST00000229829 TRAV4A0A0B4J268 109 aa7.26□□□□□ -1.25
HLA-DOA-201ENST00000229829 CTSGP08311 255 aa7.26□□□□□ -1.25
HLA-DOA-201ENST00000229829 SMCPP49901 116 aaPredicted RBP7.26□□□□□ -1.25
HLA-DOA-201ENST00000229829 RAB1BQ9H0U4 201 aa7.26□□□□□ -1.25
HLA-DOA-201ENST00000229829 SPRY2O43597 315 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 IGHV4-39P01824 125 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 ZNF688P0C7X2 276 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 PDE6HQ13956 83 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 U3KQK5 164 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 IGHV3OR16-13A0A075B7E8 117 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 IGHV3-74A0A0B4J1X5 117 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 IGHV3-66A0A0C4DH42 116 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 PRAC2D3DTV9 90 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 PAX8Q06710 450 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 ERCC8Q13216 396 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 KLHL30-AS1Q8NEE0 82 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 ODF3BA8MYP8 253 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 AJUBAQ96IF1 538 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 PRO0461Q9UI25 63 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 HHLA3Q9XRX5 114 aa7.25□□□□□ -1.25
HLA-DOA-201ENST00000229829 CARD19Q96LW7 228 aa7.24□□□□□ -1.25
HLA-DOA-201ENST00000229829 IFITM1P13164 125 aa7.24□□□□□ -1.25
HLA-DOA-201ENST00000229829 NDUFV3P56181 108 aaKnown RBP7.24□□□□□ -1.25
HLA-DOA-201ENST00000229829 FOXC1Q12948 553 aa7.24□□□□□ -1.25
HLA-DOA-201ENST00000229829 CFAP126Q5VTH2 177 aa7.24□□□□□ -1.25
HLA-DOA-201ENST00000229829 Q6ZQT7 251 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms