RNA–Protein interactions for RNA: ENST00000226247.2

FOXN1-201, Transcript of forkhead box N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-201ENST00000226247 MAP1LC3AQ9H492 121 aa8.07□□□□□ -1.12
FOXN1-201ENST00000226247 WI2-2373I1.2A0A1W2PRP0 233 aa8.07□□□□□ -1.12
FOXN1-201ENST00000226247 RRN3P1Q2M238 152 aa8.07□□□□□ -1.12
FOXN1-201ENST00000226247 Q6AWC8 147 aa8.07□□□□□ -1.12
FOXN1-201ENST00000226247 TM2D2Q9BX73 214 aa8.07□□□□□ -1.12
FOXN1-201ENST00000226247 IGHV1-3A0A0C4DH29 117 aa8.07□□□□□ -1.12
FOXN1-201ENST00000226247 K7ENP7 123 aa8.07□□□□□ -1.12
FOXN1-201ENST00000226247 BSPH1Q075Z2 132 aa8.07□□□□□ -1.12
FOXN1-201ENST00000226247 ZNF562Q6V9R5 426 aa8.07□□□□□ -1.12
FOXN1-201ENST00000226247 DPF1Q92782 380 aa8.07□□□□□ -1.12
FOXN1-201ENST00000226247 ERCC8Q13216 396 aa8.06□□□□□ -1.12
FOXN1-201ENST00000226247 ZNF493Q6ZR52 646 aa8.06□□□□□ -1.12
FOXN1-201ENST00000226247 TRAV26-2A0A0B4J265 109 aa8.06□□□□□ -1.12
FOXN1-201ENST00000226247 IGHV3-66A0A0C4DH42 116 aa8.06□□□□□ -1.12
FOXN1-201ENST00000226247 MBD3L4A6NDZ8 208 aaPredicted RBP8.06□□□□□ -1.12
FOXN1-201ENST00000226247 MBD3L3A6NE82 208 aaPredicted RBP8.06□□□□□ -1.12
FOXN1-201ENST00000226247 MBD3L5A6NJ08 208 aaPredicted RBP8.06□□□□□ -1.12
FOXN1-201ENST00000226247 NCBP2LA6PVI3 153 aaKnown RBP8.06□□□□□ -1.12
FOXN1-201ENST00000226247 HOXA3O43365 443 aaPredicted RBP8.06□□□□□ -1.12
FOXN1-201ENST00000226247 SPRY2O43597 315 aa8.06□□□□□ -1.12
FOXN1-201ENST00000226247 GAGE2BQ13066 116 aa8.06□□□□□ -1.12
FOXN1-201ENST00000226247 GAGE2EQ4V326 116 aa8.06□□□□□ -1.12
FOXN1-201ENST00000226247 MBD3L2Q8NHZ7 208 aaPredicted RBP8.06□□□□□ -1.12
FOXN1-201ENST00000226247 GAGE2DQ9UEU5 116 aa8.06□□□□□ -1.12
FOXN1-201ENST00000226247 HHLA3Q9XRX5 114 aa8.06□□□□□ -1.12
FOXN1-201ENST00000226247 MYO9AB2RTY4 2548 aa8.06□□□□□ -1.12
FOXN1-201ENST00000226247 K7EIM0 57 aa8.06□□□□□ -1.12
FOXN1-201ENST00000226247 SNCGO76070 127 aa8.06□□□□□ -1.12
FOXN1-201ENST00000226247 DPM2O94777 84 aa8.06□□□□□ -1.12
FOXN1-201ENST00000226247 TNFRSF6BO95407 300 aa8.06□□□□□ -1.12
FOXN1-201ENST00000226247 TSPAN13O95857 204 aa8.06□□□□□ -1.12
FOXN1-201ENST00000226247 MRPL23Q16540 153 aaKnown RBP8.06□□□□□ -1.12
FOXN1-201ENST00000226247 PHLDA1Q8WV24 401 aaPredicted RBP8.06□□□□□ -1.12
FOXN1-201ENST00000226247 H3BRN7 92 aa8.05□□□□□ -1.12
FOXN1-201ENST00000226247 HOXB4P17483 251 aaPredicted RBP8.05□□□□□ -1.12
FOXN1-201ENST00000226247 GFRALQ6UXV0 394 aa8.05□□□□□ -1.12
FOXN1-201ENST00000226247 DLX4Q92988 240 aaPredicted RBP8.05□□□□□ -1.12
FOXN1-201ENST00000226247 PRR25Q96S07 402 aa8.05□□□□□ -1.12
FOXN1-201ENST00000226247 KLRD1Q13241 179 aa8.04□□□□□ -1.12
FOXN1-201ENST00000226247 TMEM155Q4W5P6 130 aa8.04□□□□□ -1.12
FOXN1-201ENST00000226247 FAM159AQ6UWV7 190 aa8.04□□□□□ -1.12
FOXN1-201ENST00000226247 RAX2Q96IS3 184 aa8.04□□□□□ -1.12
FOXN1-201ENST00000226247 U3KQK5 164 aa8.04□□□□□ -1.12
FOXN1-201ENST00000226247 RPL7P18124 248 aaKnown RBP8.04□□□□□ -1.12
FOXN1-201ENST00000226247 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
FOXN1-201ENST00000226247 AJUBAQ96IF1 538 aa8.04□□□□□ -1.12
FOXN1-201ENST00000226247 SETXQ7Z333 2677 aaKnown RBP8.04□□□□□ -1.12
FOXN1-201ENST00000226247 JMJD1CQ15652 2540 aa8.04□□□□□ -1.12
FOXN1-201ENST00000226247 IGHV3-49A0A0A0MS15 119 aa8.04□□□□□ -1.12
FOXN1-201ENST00000226247 OR11H12B2RN74 326 aa8.04□□□□□ -1.12
FOXN1-201ENST00000226247 TIMM23O14925 209 aa8.04□□□□□ -1.12
FOXN1-201ENST00000226247 Q1RN00 199 aa8.04□□□□□ -1.12
FOXN1-201ENST00000226247 LINC00311Q8N616 119 aa8.04□□□□□ -1.12
FOXN1-201ENST00000226247 OR11H1Q8NG94 326 aa8.04□□□□□ -1.12
FOXN1-201ENST00000226247 OR11H2Q8NH07 326 aa8.04□□□□□ -1.12
FOXN1-201ENST00000226247 ONECUT1Q9UBC0 465 aa8.04□□□□□ -1.12
FOXN1-201ENST00000226247 BUB1B-PAK6H3BSN5 160 aa8.03□□□□□ -1.12
FOXN1-201ENST00000226247 IGF2-ASQ6U949 168 aa8.03□□□□□ -1.12
FOXN1-201ENST00000226247 TRAV4A0A0B4J268 109 aa8.03□□□□□ -1.12
FOXN1-201ENST00000226247 GAGE12JA6NER3 117 aa8.03□□□□□ -1.12
FOXN1-201ENST00000226247 GAGE7O76087 117 aa8.03□□□□□ -1.12
FOXN1-201ENST00000226247 GAGE12FP0CL80 117 aa8.03□□□□□ -1.12
FOXN1-201ENST00000226247 GAGE12GP0CL81 117 aa8.03□□□□□ -1.12
FOXN1-201ENST00000226247 GAGE12IP0CL82 117 aa8.03□□□□□ -1.12
FOXN1-201ENST00000226247 PAX8Q06710 450 aa8.03□□□□□ -1.12
FOXN1-201ENST00000226247 GAGE4Q13068 117 aa8.03□□□□□ -1.12
FOXN1-201ENST00000226247 RNF182Q8N6D2 247 aa8.03□□□□□ -1.12
FOXN1-201ENST00000226247 ITPR2Q14571 2701 aa8.03□□□□□ -1.12
FOXN1-201ENST00000226247 ANKRD29Q8N6D5 301 aa8.03□□□□□ -1.12
FOXN1-201ENST00000226247 TEP1Q99973 2627 aaKnown RBP8.02□□□□□ -1.13
FOXN1-201ENST00000226247 CRLF1O75462 422 aa8.02□□□□□ -1.13
FOXN1-201ENST00000226247 BRI3O95415 125 aa8.02□□□□□ -1.13
FOXN1-201ENST00000226247 CRYGBP07316 175 aa8.02□□□□□ -1.13
FOXN1-201ENST00000226247 DLX6P56179 175 aa8.02□□□□□ -1.13
FOXN1-201ENST00000226247 Q6ZQT7 251 aa8.02□□□□□ -1.13
FOXN1-201ENST00000226247 DTX2Q86UW9 622 aa8.02□□□□□ -1.13
FOXN1-201ENST00000226247 MYOZ3Q8TDC0 251 aa8.02□□□□□ -1.13
FOXN1-201ENST00000226247 RNF185Q96GF1 192 aa8.02□□□□□ -1.13
FOXN1-201ENST00000226247 C9JAW5 83 aa8.02□□□□□ -1.13
FOXN1-201ENST00000226247 TRGV3P03979 118 aa8.02□□□□□ -1.13
FOXN1-201ENST00000226247 LYPD1Q8N2G4 141 aa8.02□□□□□ -1.13
FOXN1-201ENST00000226247 KLHL30-AS1Q8NEE0 82 aa8.02□□□□□ -1.13
FOXN1-201ENST00000226247 PRO0461Q9UI25 63 aa8.02□□□□□ -1.13
FOXN1-201ENST00000226247 PRAC2D3DTV9 90 aa8.01□□□□□ -1.13
FOXN1-201ENST00000226247 IGHV4-39P01824 125 aa8.01□□□□□ -1.13
FOXN1-201ENST00000226247 GATD1Q8NB37 220 aa8.01□□□□□ -1.13
FOXN1-201ENST00000226247 CARD19Q96LW7 228 aa8.01□□□□□ -1.13
FOXN1-201ENST00000226247 BBC3Q96PG8 261 aaPredicted RBP8.01□□□□□ -1.13
FOXN1-201ENST00000226247 DOPEY1Q5JWR5 2465 aa8.01□□□□□ -1.13
FOXN1-201ENST00000226247 ZNF815PA8K554 130 aa8.01□□□□□ -1.13
FOXN1-201ENST00000226247 A8MWV9 139 aa8.01□□□□□ -1.13
FOXN1-201ENST00000226247 ATP5J2P56134 94 aa8.01□□□□□ -1.13
FOXN1-201ENST00000226247 MEIG1Q5JSS6 88 aa8.01□□□□□ -1.13
FOXN1-201ENST00000226247 RNASE6Q93091 150 aaKnown RBP8.01□□□□□ -1.13
FOXN1-201ENST00000226247 MRPS12O15235 138 aaKnown RBP8.01□□□□□ -1.13
FOXN1-201ENST00000226247 LY6HO94772 140 aa8.01□□□□□ -1.13
FOXN1-201ENST00000226247 PVRIGQ6DKI7 326 aa8.01□□□□□ -1.13
FOXN1-201ENST00000226247 PPDPFLQ8WWR9 84 aa8.01□□□□□ -1.13
FOXN1-201ENST00000226247 TRBV6-1A0A0K0K1D8 114 aa8□□□□□ -1.13
FOXN1-201ENST00000226247 FABP5P3A8MUU1 101 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms