RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 A0A1W2PRX2 142 aa9.04□□□□□ -0.96
TNFAIP1-201ENST00000226225 SRSF2Q01130 221 aaKnown RBP9.04□□□□□ -0.96
TNFAIP1-201ENST00000226225 LINC01545Q5VT33 79 aa9.04□□□□□ -0.96
TNFAIP1-201ENST00000226225 Q86TA4 180 aa9.04□□□□□ -0.96
TNFAIP1-201ENST00000226225 MS4A6AQ9H2W1 248 aa9.04□□□□□ -0.96
TNFAIP1-201ENST00000226225 NF1P21359 2839 aa9.04□□□□□ -0.96
TNFAIP1-201ENST00000226225 PPIFP30405 207 aaKnown RBP9.04□□□□□ -0.96
TNFAIP1-201ENST00000226225 THAP8Q8NA92 274 aa9.04□□□□□ -0.96
TNFAIP1-201ENST00000226225 FMC1Q96HJ9 113 aa9.04□□□□□ -0.96
TNFAIP1-201ENST00000226225 SLC25A39Q9BZJ4 359 aaPredicted RBP9.04□□□□□ -0.96
TNFAIP1-201ENST00000226225 EVI2AP22794 236 aa9.04□□□□□ -0.96
TNFAIP1-201ENST00000226225 OR4X2Q8NGF9 303 aa9.04□□□□□ -0.96
TNFAIP1-201ENST00000226225 ZNF414Q96IQ9 312 aa9.04□□□□□ -0.96
TNFAIP1-201ENST00000226225 MLST8Q9BVC4 326 aa9.04□□□□□ -0.96
TNFAIP1-201ENST00000226225 K7EP34 96 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 LTAP01374 205 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 FABP2P12104 132 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 RIGQ13278 110 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 PRELID3AQ96N28 172 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 NHP2Q9NX24 153 aaKnown RBP9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 G3V4G9 280 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 PRSS1P07477 247 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 CTSGP08311 255 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 RAB9AP51151 201 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 SEC11AP67812 179 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 PVRIGQ6DKI7 326 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 NDFIP1Q9BT67 221 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 SIGLEC8Q9NYZ4 499 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 C19orf71A6NCJ1 209 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 PSG3Q16557 428 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 LYZL1Q6UWQ5 148 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 AMTNQ6UX39 209 aa9.03□□□□□ -0.96
TNFAIP1-201ENST00000226225 SETXQ7Z333 2677 aaKnown RBP9.02□□□□□ -0.97
TNFAIP1-201ENST00000226225 LY6G6DO95868 133 aa9.02□□□□□ -0.97
TNFAIP1-201ENST00000226225 TRBV12-3P01733 135 aa9.02□□□□□ -0.97
TNFAIP1-201ENST00000226225 SCGB2A2Q13296 93 aa9.02□□□□□ -0.97
TNFAIP1-201ENST00000226225 TWIST1Q15672 202 aa9.02□□□□□ -0.97
TNFAIP1-201ENST00000226225 SAMD5Q5TGI4 173 aa9.02□□□□□ -0.97
TNFAIP1-201ENST00000226225 ZNF491Q8N8L2 437 aa9.02□□□□□ -0.97
TNFAIP1-201ENST00000226225 CKS2P33552 79 aa9.02□□□□□ -0.97
TNFAIP1-201ENST00000226225 STXBP6Q8NFX7 210 aa9.02□□□□□ -0.97
TNFAIP1-201ENST00000226225 METTL26Q96S19 204 aa9.02□□□□□ -0.97
TNFAIP1-201ENST00000226225 CT45A10P0DMU9 189 aa9.01□□□□□ -0.97
TNFAIP1-201ENST00000226225 AZU1P20160 251 aa9.01□□□□□ -0.97
TNFAIP1-201ENST00000226225 GTSCR1Q86UQ5 136 aa9.01□□□□□ -0.97
TNFAIP1-201ENST00000226225 TMEM75Q8N9X5 138 aa9.01□□□□□ -0.97
TNFAIP1-201ENST00000226225 Q8TAT8 98 aa9.01□□□□□ -0.97
TNFAIP1-201ENST00000226225 DPF1Q92782 380 aa9.01□□□□□ -0.97
TNFAIP1-201ENST00000226225 INAFM1C9JVW0 142 aa9.01□□□□□ -0.97
TNFAIP1-201ENST00000226225 FXYD2P54710 66 aa9.01□□□□□ -0.97
TNFAIP1-201ENST00000226225 SH2D6Q7Z4S9 175 aa9.01□□□□□ -0.97
TNFAIP1-201ENST00000226225 TRBV7-1A0A0A6YYK4 115 aa9.01□□□□□ -0.97
TNFAIP1-201ENST00000226225 A0A1W2PPM0 123 aa9.01□□□□□ -0.97
TNFAIP1-201ENST00000226225 DNAJC9-AS1A6NH13 148 aa9.01□□□□□ -0.97
TNFAIP1-201ENST00000226225 H3BRM9 83 aa9.01□□□□□ -0.97
TNFAIP1-201ENST00000226225 GP9P14770 177 aa9.01□□□□□ -0.97
TNFAIP1-201ENST00000226225 MYCNOSP40205 109 aa9.01□□□□□ -0.97
TNFAIP1-201ENST00000226225 ZNF502Q8TBZ5 544 aa9□□□□□ -0.97
TNFAIP1-201ENST00000226225 GAS8-AS1O95177 125 aa9□□□□□ -0.97
TNFAIP1-201ENST00000226225 IFI27L1Q96BM0 104 aa9□□□□□ -0.97
TNFAIP1-201ENST00000226225 DUX3Q96PT4 197 aa9□□□□□ -0.97
TNFAIP1-201ENST00000226225 TSSC4Q9Y5U2 329 aaPredicted RBP9□□□□□ -0.97
TNFAIP1-201ENST00000226225 CR1P17927 2039 aa9□□□□□ -0.97
TNFAIP1-201ENST00000226225 FGF6P10767 208 aa9□□□□□ -0.97
TNFAIP1-201ENST00000226225 UFSP1Q6NVU6 142 aa9□□□□□ -0.97
TNFAIP1-201ENST00000226225 CCDC140Q96MF4 163 aa9□□□□□ -0.97
TNFAIP1-201ENST00000226225 MSRB1Q9NZV6 116 aa9□□□□□ -0.97
TNFAIP1-201ENST00000226225 PSG8Q9UQ74 426 aa9□□□□□ -0.97
TNFAIP1-201ENST00000226225 IGKV2-40A0A087WW87 121 aaPredicted RBP8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 IGKV2D-26A0A0A0MRZ7 120 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 FAM223BA6NKX1 122 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 IGKV2D-40P01614 121 aaPredicted RBP8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 IGF1P05019 195 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 HSD52Q0P140 79 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 FAM223AQ8IWN6 122 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 CLUHP3Q96NS8 147 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 AAMDCQ9H7C9 122 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 KLF12Q9Y4X4 402 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 A0A096LNJ9 63 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 SMIM13P0DJ93 91 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 DEFB136Q30KP8 78 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 ADAMTSL5Q6ZMM2 481 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 TMEM160Q9NX00 188 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 NPYP01303 97 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 WFDC2Q14508 124 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 USMG5Q96IX5 58 aa8.99□□□□□ -0.97
TNFAIP1-201ENST00000226225 TMEM189A5PLL7 270 aa8.98□□□□□ -0.97
TNFAIP1-201ENST00000226225 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.98□□□□□ -0.97
TNFAIP1-201ENST00000226225 GATA1P15976 413 aaPredicted RBP8.98□□□□□ -0.97
TNFAIP1-201ENST00000226225 CRIP1P50238 77 aa8.98□□□□□ -0.97
TNFAIP1-201ENST00000226225 ETDBQ3ZM63 59 aa8.98□□□□□ -0.97
TNFAIP1-201ENST00000226225 ATRQ13535 2644 aa8.98□□□□□ -0.97
TNFAIP1-201ENST00000226225 PDZD2O15018 2839 aa8.98□□□□□ -0.97
TNFAIP1-201ENST00000226225 H3BMG7 143 aa8.98□□□□□ -0.97
TNFAIP1-201ENST00000226225 RPL7P18124 248 aaKnown RBP8.98□□□□□ -0.97
TNFAIP1-201ENST00000226225 ORM1P02763 201 aa8.98□□□□□ -0.97
TNFAIP1-201ENST00000226225 ORMDL3Q8N138 153 aa8.98□□□□□ -0.97
TNFAIP1-201ENST00000226225 HIVEP1P15822 2718 aa8.97□□□□□ -0.97
TNFAIP1-201ENST00000226225 CIDEAO60543 219 aa8.97□□□□□ -0.97
TNFAIP1-201ENST00000226225 SHANK2-AS3Q9BTD1 123 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms