RNA–Protein interactions for RNA: ENST00000221847.5

EBI3-201, Transcript of Epstein-Barr virus induced 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBI3, Length 1,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-201ENST00000221847 TCTAP57738 103 aa11.31□□□□□ -0.6
EBI3-201ENST00000221847 ZNF415Q09FC8 603 aa11.31□□□□□ -0.6
EBI3-201ENST00000221847 LINC00476Q8WZB0 136 aa11.31□□□□□ -0.6
EBI3-201ENST00000221847 TRGV11A0A075B6L2 103 aa11.3□□□□□ -0.6
EBI3-201ENST00000221847 TRGV1A0A0A0MS02 117 aa11.3□□□□□ -0.6
EBI3-201ENST00000221847 TRBV6-1A0A0K0K1D8 114 aa11.3□□□□□ -0.6
EBI3-201ENST00000221847 F5H768 121 aa11.3□□□□□ -0.6
EBI3-201ENST00000221847 SPINK4O60575 86 aa11.3□□□□□ -0.6
EBI3-201ENST00000221847 LY6G6CO95867 125 aa11.3□□□□□ -0.6
EBI3-201ENST00000221847 ATP5G1P05496 136 aa11.3□□□□□ -0.6
EBI3-201ENST00000221847 PFN1P07737 140 aaKnown RBP11.3□□□□□ -0.6
EBI3-201ENST00000221847 ZFP30Q9Y2G7 519 aa11.3□□□□□ -0.6
EBI3-201ENST00000221847 IGHV3-16A0A0C4DH30 117 aa11.29□□□□□ -0.6
EBI3-201ENST00000221847 TYMSP04818 313 aa11.29□□□□□ -0.6
EBI3-201ENST00000221847 TMEM88Q6PEY1 159 aa11.29□□□□□ -0.6
EBI3-201ENST00000221847 ZC2HC1AQ96GY0 325 aa11.29□□□□□ -0.6
EBI3-201ENST00000221847 KCNS1Q96KK3 526 aa11.29□□□□□ -0.6
EBI3-201ENST00000221847 NDUFAF3Q9BU61 184 aa11.29□□□□□ -0.6
EBI3-201ENST00000221847 SDF2L1Q9HCN8 221 aa11.29□□□□□ -0.6
EBI3-201ENST00000221847 MRPL16Q9NX20 251 aaKnown RBP11.29□□□□□ -0.6
EBI3-201ENST00000221847 LTAP01374 205 aa11.28□□□□□ -0.6
EBI3-201ENST00000221847 FAM210BQ96KR6 192 aa11.28□□□□□ -0.6
EBI3-201ENST00000221847 TRGV2A0A075B6R0 118 aa11.27□□□□□ -0.61
EBI3-201ENST00000221847 FABP5P3A8MUU1 101 aa11.27□□□□□ -0.61
EBI3-201ENST00000221847 IFNA1P01562 189 aa11.27□□□□□ -0.61
EBI3-201ENST00000221847 S100A9P06702 114 aaKnown RBP11.27□□□□□ -0.61
EBI3-201ENST00000221847 CRIP1P50238 77 aa11.27□□□□□ -0.61
EBI3-201ENST00000221847 BLOC1S1P78537 153 aa11.27□□□□□ -0.61
EBI3-201ENST00000221847 LGALS9BQ3B8N2 356 aa11.27□□□□□ -0.61
EBI3-201ENST00000221847 COX8CQ7Z4L0 72 aa11.27□□□□□ -0.61
EBI3-201ENST00000221847 SPXQ9BT56 116 aa11.27□□□□□ -0.61
EBI3-201ENST00000221847 BCL2P10415 239 aa11.26□□□□□ -0.61
EBI3-201ENST00000221847 LGALS9CQ6DKI2 356 aa11.26□□□□□ -0.61
EBI3-201ENST00000221847 NHLRC2Q8NBF2 726 aa11.26□□□□□ -0.61
EBI3-201ENST00000221847 C11orf52Q96A22 123 aa11.26□□□□□ -0.61
EBI3-201ENST00000221847 TXNDC17Q9BRA2 123 aa11.26□□□□□ -0.61
EBI3-201ENST00000221847 VPS13DQ5THJ4 4388 aa11.25□□□□□ -0.61
EBI3-201ENST00000221847 IGKV3D-20A0A0C4DH25 116 aa11.25□□□□□ -0.61
EBI3-201ENST00000221847 SH2D1AO60880 128 aa11.25□□□□□ -0.61
EBI3-201ENST00000221847 HOXA5P20719 270 aa11.25□□□□□ -0.61
EBI3-201ENST00000221847 MEF2BQ02080 365 aaPredicted RBP11.25□□□□□ -0.61
EBI3-201ENST00000221847 OR5I1Q13606 314 aa11.25□□□□□ -0.61
EBI3-201ENST00000221847 BAGE2Q86Y30 109 aa11.25□□□□□ -0.61
EBI3-201ENST00000221847 C18orf15Q96N68 181 aa11.25□□□□□ -0.61
EBI3-201ENST00000221847 DERL1Q9BUN8 251 aa11.25□□□□□ -0.61
EBI3-201ENST00000221847 ORM1P02763 201 aa11.24□□□□□ -0.61
EBI3-201ENST00000221847 RPL35P42766 123 aaKnown RBP11.24□□□□□ -0.61
EBI3-201ENST00000221847 FAM162BQ5T6X4 162 aa11.24□□□□□ -0.61
EBI3-201ENST00000221847 VAX2Q9UIW0 290 aa11.24□□□□□ -0.61
EBI3-201ENST00000221847 RYR2Q92736 4967 aa11.24□□□□□ -0.61
EBI3-201ENST00000221847 RYR3Q15413 4870 aa11.23□□□□□ -0.61
EBI3-201ENST00000221847 M0R2P5 195 aa11.23□□□□□ -0.61
EBI3-201ENST00000221847 IGHV3-53P01767 116 aa11.23□□□□□ -0.61
EBI3-201ENST00000221847 ZNF674Q2M3X9 581 aa11.23□□□□□ -0.61
EBI3-201ENST00000221847 LYPD6BQ8NI32 183 aa11.23□□□□□ -0.61
EBI3-201ENST00000221847 RASL10AQ92737 203 aa11.23□□□□□ -0.61
EBI3-201ENST00000221847 MLST8Q9BVC4 326 aa11.23□□□□□ -0.61
EBI3-201ENST00000221847 TRAV26-1A0A087WT03 109 aa11.22□□□□□ -0.61
EBI3-201ENST00000221847 B4DEV8 164 aa11.22□□□□□ -0.61
EBI3-201ENST00000221847 KRBOX1C9JBD0 128 aa11.22□□□□□ -0.61
EBI3-201ENST00000221847 M0R036 132 aa11.22□□□□□ -0.61
EBI3-201ENST00000221847 PDE6DO43924 150 aa11.22□□□□□ -0.61
EBI3-201ENST00000221847 RNASE3P12724 160 aaKnown RBP11.22□□□□□ -0.61
EBI3-201ENST00000221847 TAGLN2P37802 199 aaKnown RBP11.22□□□□□ -0.61
EBI3-201ENST00000221847 C9orf85Q96MD7 179 aa11.22□□□□□ -0.61
EBI3-201ENST00000221847 MED9Q9NWA0 146 aa11.22□□□□□ -0.61
EBI3-201ENST00000221847 MUC4Q99102 2169 aa11.21□□□□□ -0.61
EBI3-201ENST00000221847 A0A0J9YY99 117 aa11.21□□□□□ -0.61
EBI3-201ENST00000221847 RAB19A4D1S5 217 aa11.21□□□□□ -0.61
EBI3-201ENST00000221847 NUDT3O95989 172 aa11.21□□□□□ -0.61
EBI3-201ENST00000221847 C15orf53Q8NAA6 179 aa11.21□□□□□ -0.61
EBI3-201ENST00000221847 RBFOX3A6NFN3 312 aa11.2□□□□□ -0.62
EBI3-201ENST00000221847 C9JCJ5 164 aa11.2□□□□□ -0.62
EBI3-201ENST00000221847 SFTA3P0C7M3 94 aa11.2□□□□□ -0.62
EBI3-201ENST00000221847 S100A4P26447 101 aaKnown RBP11.2□□□□□ -0.62
EBI3-201ENST00000221847 ASIPP42127 132 aa11.2□□□□□ -0.62
EBI3-201ENST00000221847 CENPWQ5EE01 88 aa11.2□□□□□ -0.62
EBI3-201ENST00000221847 POM121L12Q8N7R1 296 aa11.2□□□□□ -0.62
EBI3-201ENST00000221847 TMSB15BA0A087X1C1 80 aa11.19□□□□□ -0.62
EBI3-201ENST00000221847 GRIFINA4D1Z8 144 aa11.19□□□□□ -0.62
EBI3-201ENST00000221847 P0DMU3 169 aa11.19□□□□□ -0.62
EBI3-201ENST00000221847 FAM231AP0DMU4 169 aa11.19□□□□□ -0.62
EBI3-201ENST00000221847 FAM231CP0DMU5 169 aa11.19□□□□□ -0.62
EBI3-201ENST00000221847 FHL2Q14192 279 aa11.19□□□□□ -0.62
EBI3-201ENST00000221847 ZNF876PQ49A33 203 aa11.19□□□□□ -0.62
EBI3-201ENST00000221847 PRR27Q6MZM9 219 aa11.19□□□□□ -0.62
EBI3-201ENST00000221847 TEX261Q6UWH6 196 aa11.19□□□□□ -0.62
EBI3-201ENST00000221847 ZNF575Q86XF7 245 aa11.19□□□□□ -0.62
EBI3-201ENST00000221847 PCNPQ8WW12 178 aaKnown RBP11.19□□□□□ -0.62
EBI3-201ENST00000221847 VSIG2Q96IQ7 327 aa11.19□□□□□ -0.62
EBI3-201ENST00000221847 ZNF479Q96JC4 524 aa11.19□□□□□ -0.62
EBI3-201ENST00000221847 HYDINQ4G0P3 5121 aa11.19□□□□□ -0.62
EBI3-201ENST00000221847 PGPEP1LA6NFU8 196 aa11.18□□□□□ -0.62
EBI3-201ENST00000221847 IGLV2-8P01709 118 aa11.18□□□□□ -0.62
EBI3-201ENST00000221847 LINC01559Q495D7 138 aa11.18□□□□□ -0.62
EBI3-201ENST00000221847 ZNF506Q5JVG8 444 aa11.18□□□□□ -0.62
EBI3-201ENST00000221847 TRAV4A0A0B4J268 109 aa11.17□□□□□ -0.62
EBI3-201ENST00000221847 TRGV4A0A0C4DH28 118 aa11.17□□□□□ -0.62
EBI3-201ENST00000221847 H3BVH4 76 aa11.17□□□□□ -0.62
EBI3-201ENST00000221847 GNG4P50150 75 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms