RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Prss44Q402U7 372 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 AgaQ64191 346 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Ss18l1Q8BW22 402 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Spsb4Q8R5B6 273 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 P01680 129 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Defa-rs1P17533 116 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Adam8Q05910 826 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Psg27Q497W2 474 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Olfr149Q60888 311 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Hs3st3b1Q9QZS6 390 aa11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Nup210Q9QY81 1886 aaKnown RBP11.69□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 6430628N08RikA0A0U1RQ45 177 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 A730046J19RikA0A1B0GSN8 89 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Esp23A8R0V5 104 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gm14408E9Q6B9 136 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Rtl4Q3URY0 304 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Olfr411Q7TRW8 315 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Lsm11Q8BUV6 361 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gm12355A2A4X6 163 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Srsf3P84104 164 aaKnown RBP11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Asphd1Q2TA57 360 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Try10Q792Z1 246 aaKnown RBP11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Stac2Q8R1B0 408 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Olfr968Q8VFN4 314 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 MmdQ9CQY7 238 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gcm1P70348 436 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Arl14eplQ3UKZ7 152 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Ldlrad2Q3V0V0 142 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 2810408A11RikQ6NSU2 435 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Smap2Q7TN29 428 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Nkg7Q99PA5 165 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Egr4Q9WUF2 478 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Nlrc5C3VPR6 1915 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Igkv4-50A0A0B4J1J0 117 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Ighv1-67A0A0G2JFN9 117 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Ssbp4Q3U4B1 363 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Lrtm1Q8BXQ3 356 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Tmem230Q8CIB6 120 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Cd300eQ8K249 196 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Q8VE95 218 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Olfr123Q8VFQ1 309 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Ndufb8Q9D6J5 186 aa11.68□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Trav23A0A0G2JG17 115 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 1700015F17RikD3YUK8 150 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gm20532G3UXR8 106 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gm21732J3QM79 361 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gm21921J3QNB5 361 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Cks1brtQ3UNC9 96 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 H2-M10.4Q85ZW8 331 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Olfr530Q8VFE8 307 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Tmem170aQ9D342 144 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Znf319Q9ERR8 581 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Igkv1-131A0A140T8M8 120 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Tmem139E9PX92 214 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gm9733Q1AN91 178 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Hist3h2bbQ8CGP0 126 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Hist3h2baQ9D2U9 126 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Igkv6-23A0A140T8N5 115 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 P01655 112 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Igh-3P01867 404 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Pef1Q8BFY6 275 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Olfr1259Q8VEZ1 309 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Pbp2Q8VIN1 187 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Vmn1r63Q9EPT1 300 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Smr2O09133 150 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Kazald1Q8BJ66 313 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Atg101Q9D8Z6 218 aa11.67□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Trav6n-5A0A075B621 112 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Trav6-5A0A075B6B5 112 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Igh-VJ558P01758 117 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Zfp36l2P23949 484 aaKnown RBP11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Rbfox2Q8BP71 449 aaKnown RBP11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gtf3aQ8VHT7 364 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 PigpQ9JHG1 132 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Scgb1b11A0A087WQJ0 93 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Olfr175-ps1A0A140T8K4 308 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 eef1akmt3D3YWP0 232 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gm43517E9PYS1 339 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gm5426J3QNM7 103 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Znf641Q8BZ34 422 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Plppr2Q8VCY8 343 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Pkd1l3Q2EG98 2201 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Zfp977L7N2E7 438 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gimap1P70224 277 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 MyocosQ3UWS6 143 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gm10283Q8C3L5 117 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Olfr824Q8VFU4 315 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Cldn16Q925N4 235 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Zfpl1Q9DB43 310 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Fam213bQ9DB60 201 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Tmprss5Q9ER04 455 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Shank1D3YZU1 2167 aa11.66□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Wbp2nlQ9D529 359 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 1700013G24RikQ9DAC6 286 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Siglec15A7E1W8 342 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Gstp2P46425 210 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Ptprz1B9EKR1 2312 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 SellP18337 372 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Dnase2P56542 353 aa11.65□□□□□ -0.54
Pcdha1-202ENSMUST00000193839 Q0VG49 157 aa11.65□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms