RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Trav13d-3J3QMG8 112 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Olfr958Q8VEY3 312 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Nlrc5C3VPR6 1915 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 C1ql3Q9ESN4 255 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Olfr1209Q3SXJ3 310 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Defa-rs2P17534 91 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Atp5iQ06185 71 aaKnown RBP14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Smim8Q9CQQ0 97 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Psmg3Q9CZH3 122 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Fhl5Q9WTX7 284 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Sc5dO88822 299 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Arf6P62331 175 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Clpsl2Q3UW21 102 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Olfr150Q60895 312 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Psg17Q62056 475 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Fam214bQ8BR27 538 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Ndufb3Q9CQZ6 104 aa14.26□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Igkv12-44A0A140T8M2 115 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Rnd3P61588 244 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Mpv17lQ99MS3 194 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Adh4Q9QYY9 377 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Phlda3Q9WV95 125 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Mrpl42Q9CPV3 142 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Olfr918E9PVZ7 325 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 MscO88940 201 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Ptpn18Q61152 453 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Rnf151Q9CQ29 239 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Olfr1382Q7TQT3 311 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 GgctQ9D7X8 188 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Slc25a53A2AF28 346 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Saa2P05367 122 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Prss58Q8BW11 241 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Znf524Q9D0B1 321 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Ighv5-17A0A075B5R1 117 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Prss44Q402U7 372 aa14.25□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Plxnb3Q9QY40 1902 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Rnf39A2RT81 352 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 RaxO35602 342 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 P01629 112 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 TymsP07607 307 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Gm20532G3UXR8 106 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Gm20825J3QM67 227 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Ssty2Q149W4 227 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Wfdc5Q4KXB6 126 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 PmelQ60696 626 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Dppa1Q810Y7 116 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Acsm5Q8BGA8 578 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Olfr354Q8VGJ8 317 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 DdtO35215 118 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 P01635 115 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Sumo2P61957 95 aaKnown RBP14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Ormdl3Q9CPZ6 153 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Trem3Q9JKE1 183 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Q0VG49 157 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Zc3h3Q8CHP0 950 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Chchd2Q9D1L0 153 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Sdk2Q6V4S5 2176 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Prss50Q8BLH5 439 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Zfp764E9QAP1 431 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Tcl1b1P56840 116 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Tcf23Q9JLR5 209 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 BC024063A0A1W2P7G7 749 aa14.24□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Zfp936Q3ULA8 456 aa14.23□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Foxn4Q8K3Q3 521 aa14.23□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Myoz1Q9JK37 296 aa14.23□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 P06344 263 aa14.23□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Klk1b24Q61754 263 aa14.23□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Olfr498Q8VEW2 330 aa14.23□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Atp6v0cP63082 155 aa14.23□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 P04212 136 aa14.23□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Igfbp3P47878 292 aa14.23□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Gm10750Q3V0I0 133 aa14.23□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Arl6ip6Q8BH07 226 aa14.23□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 HhexP43120 271 aa14.23□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Mbnl3Q8R003 342 aaKnown RBP14.23□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 SdhdQ9CXV1 159 aa14.23□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Rnase9P60154 184 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Trav16A0A075B653 116 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Hapln4Q80WM4 400 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Nkg7Q99PA5 165 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 NgfP01139 241 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 P01654 111 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 P01656 111 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 P03977 111 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Myf5P24699 255 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Ly6fP35460 134 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Nup35Q8R4R6 325 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 2210407C18RikQ6YI28 220 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Ighv1-54A0A075B5W5 117 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Gfra1P97785 468 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 PgpQ8CHP8 321 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Cdk2ap2Q9CPY4 127 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 D630044L22RikQ8C701 164 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 P2ry6Q9ERK9 328 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Gm14214V9GX35 225 aa14.22□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Adamts17E9Q4D1 1122 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 C1ql1O88992 258 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Cxcl2P10889 100 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Tcrg-V4A0A0B4J1J8 138 aa14.21□□□□□ -0.13
Ccdc88a-201ENSMUST00000040182 Gm16442D3YZG3 307 aa14.21□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms