RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 BAGE3Q86Y29 109 aa13.05□□□□□ -0.32
PHGDH-208ENST00000641023 PACRGQ96M98 296 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-208ENST00000641023 SMR3AQ99954 134 aa13.05□□□□□ -0.32
PHGDH-208ENST00000641023 C2orf70A6NJV1 201 aa13.04□□□□□ -0.32
PHGDH-208ENST00000641023 HIST1H1AQ02539 215 aaPredicted RBP13.04□□□□□ -0.32
PHGDH-208ENST00000641023 WFDC3Q8IUB2 231 aa13.04□□□□□ -0.32
PHGDH-208ENST00000641023 OR1N2Q8NGR9 330 aa13.04□□□□□ -0.32
PHGDH-208ENST00000641023 TMEM18Q96B42 140 aa13.04□□□□□ -0.32
PHGDH-208ENST00000641023 MS4A6AQ9H2W1 248 aa13.04□□□□□ -0.32
PHGDH-208ENST00000641023 ARMS2P0C7Q2 107 aa13.04□□□□□ -0.32
PHGDH-208ENST00000641023 HILS1P60008 231 aa13.04□□□□□ -0.32
PHGDH-208ENST00000641023 LINC01559Q495D7 138 aa13.04□□□□□ -0.32
PHGDH-208ENST00000641023 TMEM256Q8N2U0 113 aa13.04□□□□□ -0.32
PHGDH-208ENST00000641023 KLHL30-AS1Q8NEE0 82 aa13.04□□□□□ -0.32
PHGDH-208ENST00000641023 OR8A1Q8NGG7 326 aa13.04□□□□□ -0.32
PHGDH-208ENST00000641023 NOTCH2Q04721 2471 aa13.04□□□□□ -0.32
PHGDH-208ENST00000641023 ANK3Q12955 4377 aaKnown RBP13.03□□□□□ -0.32
PHGDH-208ENST00000641023 SLURP1P55000 103 aa13.03□□□□□ -0.32
PHGDH-208ENST00000641023 PEMTQ9UBM1 199 aa13.03□□□□□ -0.32
PHGDH-208ENST00000641023 A0A1B0GUS0 222 aa13.03□□□□□ -0.32
PHGDH-208ENST00000641023 AMBPP02760 352 aa13.03□□□□□ -0.32
PHGDH-208ENST00000641023 SNRPD3P62318 126 aaKnown RBP13.03□□□□□ -0.32
PHGDH-208ENST00000641023 LYZL1Q6UWQ5 148 aa13.03□□□□□ -0.32
PHGDH-208ENST00000641023 C16orf95Q9H693 158 aa13.03□□□□□ -0.32
PHGDH-208ENST00000641023 LY6G6DO95868 133 aa13.02□□□□□ -0.33
PHGDH-208ENST00000641023 FER1L6-AS1Q8NA97 138 aa13.02□□□□□ -0.33
PHGDH-208ENST00000641023 TP53TG3Q9ULZ0 132 aa13.02□□□□□ -0.33
PHGDH-208ENST00000641023 CUBNO60494 3623 aa13.02□□□□□ -0.33
PHGDH-208ENST00000641023 HIVEP2P31629 2446 aa13.02□□□□□ -0.33
PHGDH-208ENST00000641023 LINC01006Q8NI28 216 aa13.01□□□□□ -0.33
PHGDH-208ENST00000641023 JMJD8Q96S16 334 aa13.01□□□□□ -0.33
PHGDH-208ENST00000641023 TRBV7-9A0A0J9YWB2 115 aa13.01□□□□□ -0.33
PHGDH-208ENST00000641023 F6UB75 175 aa13.01□□□□□ -0.33
PHGDH-208ENST00000641023 TFPI2P48307 235 aa13.01□□□□□ -0.33
PHGDH-208ENST00000641023 PAFAH1B2P68402 229 aa13.01□□□□□ -0.33
PHGDH-208ENST00000641023 MTORP42345 2549 aa13□□□□□ -0.33
PHGDH-208ENST00000641023 NUPR1O60356 82 aa13□□□□□ -0.33
PHGDH-208ENST00000641023 SERF1AO75920 110 aa13□□□□□ -0.33
PHGDH-208ENST00000641023 IGLC6P0CF74 106 aa13□□□□□ -0.33
PHGDH-208ENST00000641023 ESDP10768 282 aa13□□□□□ -0.33
PHGDH-208ENST00000641023 DEFB1P60022 68 aa13□□□□□ -0.33
PHGDH-208ENST00000641023 OR9G4Q8NGQ1 327 aa13□□□□□ -0.33
PHGDH-208ENST00000641023 ALKBH7Q9BT30 221 aaPredicted RBP13□□□□□ -0.33
PHGDH-208ENST00000641023 K7EQG2 157 aa13□□□□□ -0.33
PHGDH-208ENST00000641023 CTRLP40313 264 aa13□□□□□ -0.33
PHGDH-208ENST00000641023 GATD1Q8NB37 220 aa13□□□□□ -0.33
PHGDH-208ENST00000641023 IGKV3D-20A0A0C4DH25 116 aa12.99□□□□□ -0.33
PHGDH-208ENST00000641023 ZNF575Q86XF7 245 aa12.99□□□□□ -0.33
PHGDH-208ENST00000641023 C18orf32Q8TCD1 76 aa12.99□□□□□ -0.33
PHGDH-208ENST00000641023 DUX3Q96PT4 197 aa12.99□□□□□ -0.33
PHGDH-208ENST00000641023 F2Z2F3 143 aa12.98□□□□□ -0.33
PHGDH-208ENST00000641023 GPX1P07203 203 aa12.98□□□□□ -0.33
PHGDH-208ENST00000641023 PYY3Q5JQD4 70 aa12.98□□□□□ -0.33
PHGDH-208ENST00000641023 PSMG4Q5JS54 123 aa12.98□□□□□ -0.33
PHGDH-208ENST00000641023 ZNF493Q6ZR52 646 aa12.98□□□□□ -0.33
PHGDH-208ENST00000641023 ZFAND2AQ8N6M9 145 aa12.98□□□□□ -0.33
PHGDH-208ENST00000641023 FAM19A4Q96LR4 140 aa12.98□□□□□ -0.33
PHGDH-208ENST00000641023 LOC102724200A0A096LPH7 203 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-208ENST00000641023 TRAV21A0A0B4J279 112 aa12.98□□□□□ -0.33
PHGDH-208ENST00000641023 ZNF688P0C7X2 276 aa12.98□□□□□ -0.33
PHGDH-208ENST00000641023 LINC00310P59036 64 aa12.98□□□□□ -0.33
PHGDH-208ENST00000641023 ADAMTSL5Q6ZMM2 481 aa12.98□□□□□ -0.33
PHGDH-208ENST00000641023 C11orf44Q8N8P7 122 aa12.98□□□□□ -0.33
PHGDH-208ENST00000641023 DLX4Q92988 240 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-208ENST00000641023 J3KRW8 73 aa12.97□□□□□ -0.33
PHGDH-208ENST00000641023 C11orf21Q9P2W6 132 aa12.97□□□□□ -0.33
PHGDH-208ENST00000641023 CD28P10747 220 aa12.97□□□□□ -0.33
PHGDH-208ENST00000641023 SSTP61278 116 aa12.97□□□□□ -0.33
PHGDH-208ENST00000641023 TWIST1Q15672 202 aa12.97□□□□□ -0.33
PHGDH-208ENST00000641023 PRR9Q5T870 116 aa12.97□□□□□ -0.33
PHGDH-208ENST00000641023 APRG1Q8IVJ8 170 aa12.97□□□□□ -0.33
PHGDH-208ENST00000641023 TSSC4Q9Y5U2 329 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-208ENST00000641023 NTF3P20783 257 aa12.96□□□□□ -0.33
PHGDH-208ENST00000641023 PRR31Q5SQ13 230 aa12.96□□□□□ -0.33
PHGDH-208ENST00000641023 CNFNQ9BYD5 112 aa12.96□□□□□ -0.33
PHGDH-208ENST00000641023 SAMD10Q9BYL1 202 aa12.96□□□□□ -0.33
PHGDH-208ENST00000641023 NIT2Q9NQR4 276 aa12.96□□□□□ -0.33
PHGDH-208ENST00000641023 NF1P21359 2839 aa12.96□□□□□ -0.34
PHGDH-208ENST00000641023 EBLN2Q6P2I7 272 aa12.95□□□□□ -0.34
PHGDH-208ENST00000641023 RCHY1Q96PM5 261 aa12.95□□□□□ -0.34
PHGDH-208ENST00000641023 MUC21A0A0G2JKD1 596 aa12.95□□□□□ -0.34
PHGDH-208ENST00000641023 MUC21A0A140T8X8 626 aa12.95□□□□□ -0.34
PHGDH-208ENST00000641023 NDUFA7O95182 113 aa12.95□□□□□ -0.34
PHGDH-208ENST00000641023 MUC21Q5SSG8 566 aa12.95□□□□□ -0.34
PHGDH-208ENST00000641023 HIST2H2BDQ6DRA6 164 aa12.95□□□□□ -0.34
PHGDH-208ENST00000641023 RAX2Q96IS3 184 aa12.95□□□□□ -0.34
PHGDH-208ENST00000641023 KCNS1Q96KK3 526 aa12.95□□□□□ -0.34
PHGDH-208ENST00000641023 CITED2Q99967 270 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-208ENST00000641023 CSN3P07498 182 aa12.94□□□□□ -0.34
PHGDH-208ENST00000641023 RNASE4P34096 147 aaKnown RBP12.94□□□□□ -0.34
PHGDH-208ENST00000641023 IQCJQ1A5X6 159 aa12.94□□□□□ -0.34
PHGDH-208ENST00000641023 OTOGQ6ZRI0 2925 aa12.94□□□□□ -0.34
PHGDH-208ENST00000641023 A0A0J9YX75 114 aa12.93□□□□□ -0.34
PHGDH-208ENST00000641023 A0A1W2PRX2 142 aa12.93□□□□□ -0.34
PHGDH-208ENST00000641023 CCL24O00175 119 aa12.93□□□□□ -0.34
PHGDH-208ENST00000641023 CD33P20138 364 aa12.93□□□□□ -0.34
PHGDH-208ENST00000641023 FHL3Q13643 280 aa12.93□□□□□ -0.34
PHGDH-208ENST00000641023 Q6ZQT7 251 aa12.93□□□□□ -0.34
PHGDH-208ENST00000641023 DYNLRB2Q8TF09 96 aa12.93□□□□□ -0.34
PHGDH-208ENST00000641023 RNF114Q9Y508 228 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms