RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 A0A1W2PRS3 328 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 IBA57-AS1B1ANH7 110 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 C19orf84I3L1E1 186 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 M0R378 163 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 GEMIN2O14893 280 aaKnown RBP1.09□□□□□ -2.23
CCDC7-216ENST00000640058 RER1O15258 196 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 LYRM1O43325 122 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 SNCGO76070 127 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 MPC2O95563 127 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 TCL1BO95988 128 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 HBDP02042 147 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 TCRAP04437 139 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 CTSDP07339 412 aaPredicted RBP1.09□□□□□ -2.23
CCDC7-216ENST00000640058 CXCL1P09341 107 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 SLC25A4P12235 298 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 NFYAP23511 347 aaPredicted RBP1.09□□□□□ -2.23
CCDC7-216ENST00000640058 ETV6P41212 452 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 INSL3P51460 131 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 ZNF80P51504 273 aaPredicted RBP1.09□□□□□ -2.23
CCDC7-216ENST00000640058 POLR2JP52435 117 aaKnown RBP1.09□□□□□ -2.23
CCDC7-216ENST00000640058 ARPP19P56211 112 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 PCBD1P61457 104 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 MRPS36P82909 103 aaKnown RBP1.09□□□□□ -2.23
CCDC7-216ENST00000640058 PEA15Q15121 130 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 KHDC3LQ587J8 217 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 CLLU1Q5K131 121 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 Q5XG85 94 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 OR2T2Q6IF00 324 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 LINC00299Q6ZSB3 139 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 MIR17HGQ75NE6 70 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 AAED1Q7RTV5 226 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 S100ZQ8WXG8 99 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 CARD19Q96LW7 228 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 Q96M85 177 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 ATG5Q9H1Y0 275 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 PRO1933Q9H354 126 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 CHCHD2Q9Y6H1 151 aaPredicted RBP1.09□□□□□ -2.23
CCDC7-216ENST00000640058 CCDC141Q6ZP82 1450 aa1.09□□□□□ -2.24
CCDC7-216ENST00000640058 NUP210Q8TEM1 1887 aaPredicted RBP1.09□□□□□ -2.24
CCDC7-216ENST00000640058 ZFYVE16Q7Z3T8 1539 aa1.09□□□□□ -2.24
CCDC7-216ENST00000640058 PHLPP1O60346 1717 aa1.09□□□□□ -2.24
CCDC7-216ENST00000640058 NRKQ7Z2Y5 1582 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 UACAQ9BZF9 1416 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 CDK5RAP2Q96SN8 1893 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 A2ML1A8K2U0 1454 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 MED14O60244 1454 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 ADGRL2O95490 1459 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 MBD5Q9P267 1494 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 TRBV20-1A0A075B6N2 111 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 TRBV10-2A0A0K0K1G8 114 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 SPAARA0A1B0GVQ0 90 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 LOC107986453A0A1B0GWG9 222 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 ZNF727A8MUV8 499 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 ZNF736B4DX44 427 aaPredicted RBP1.08□□□□□ -2.24
CCDC7-216ENST00000640058 CCDC179H3BU77 68 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 HYPMO75409 117 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 IGKV1-5P01602 117 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 IGHV3-7P01780 117 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 SLC25A5P05141 298 aaKnown RBP1.08□□□□□ -2.24
CCDC7-216ENST00000640058 TRGC1P0CF51 173 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 IL7P13232 177 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 FXYD2P54710 66 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 NPC2P61916 151 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 SNRPD3P62318 126 aaKnown RBP1.08□□□□□ -2.24
CCDC7-216ENST00000640058 KLRD1Q13241 179 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 CIRBPQ14011 172 aaKnown RBP1.08□□□□□ -2.24
CCDC7-216ENST00000640058 LINC01554Q52M75 96 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 PYY3Q5JQD4 70 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 FAM27BQ5VT28 67 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 TMEM91Q6ZNR0 172 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 FOXI2Q6ZQN5 318 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 PHF5AQ7RTV0 110 aaKnown RBP1.08□□□□□ -2.24
CCDC7-216ENST00000640058 ZNF720Q7Z2F6 126 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 TEN1Q86WV5 123 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 MORN4Q8NDC4 146 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 WFDC11Q8NEX6 87 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 OR5AK2Q8NH90 309 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 STAG3L4Q8TBR4 150 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 DPH3Q96FX2 82 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 HYLS1Q96M11 299 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 SDF2Q99470 211 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 AGPAT4-IT1Q9H0P7 198 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 SLC35B3Q9H1N7 401 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 NHP2Q9NX24 153 aaKnown RBP1.08□□□□□ -2.24
CCDC7-216ENST00000640058 TAS2R4Q9NYW5 299 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 RNF11Q9Y3C5 154 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 LHFPL6Q9Y693 200 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 SERP1Q9Y6X1 66 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 KIAA1551Q9HCM1 1747 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 HMCN1Q96RW7 5635 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 MAP3K1Q13233 1512 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 LAMB2P55268 1798 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 UBR2Q8IWV8 1755 aa1.08□□□□□ -2.24
CCDC7-216ENST00000640058 SCAPERQ9BY12 1400 aa1.07□□□□□ -2.24
CCDC7-216ENST00000640058 PIK3C2AO00443 1686 aa1.07□□□□□ -2.24
CCDC7-216ENST00000640058 PLXND1Q9Y4D7 1925 aa1.07□□□□□ -2.24
CCDC7-216ENST00000640058 CFTRP13569 1480 aa1.07□□□□□ -2.24
CCDC7-216ENST00000640058 TEX14Q8IWB6 1497 aa1.07□□□□□ -2.24
CCDC7-216ENST00000640058 FYCO1Q9BQS8 1478 aa1.07□□□□□ -2.24
CCDC7-216ENST00000640058 CHD1O14646 1710 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms