RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 SCGB2A2Q13296 93 aa12.54□□□□□ -0.4
HCG27-205ENST00000638546 LINC01559Q495D7 138 aa12.54□□□□□ -0.4
HCG27-205ENST00000638546 ITPR3Q14573 2671 aa12.54□□□□□ -0.4
HCG27-205ENST00000638546 TEP1Q99973 2627 aaKnown RBP12.53□□□□□ -0.4
HCG27-205ENST00000638546 ZNF469Q96JG9 3925 aaPredicted RBP12.53□□□□□ -0.4
HCG27-205ENST00000638546 ZFHX3Q15911 3703 aa12.53□□□□□ -0.4
HCG27-205ENST00000638546 ZNF705DP0CH99 300 aaPredicted RBP12.52□□□□□ -0.4
HCG27-205ENST00000638546 ZNF705BP0CI00 300 aaPredicted RBP12.52□□□□□ -0.4
HCG27-205ENST00000638546 SRD5A1P18405 259 aa12.52□□□□□ -0.4
HCG27-205ENST00000638546 DNLZQ5SXM8 178 aa12.52□□□□□ -0.4
HCG27-205ENST00000638546 FER1L6-AS1Q8NA97 138 aa12.52□□□□□ -0.4
HCG27-205ENST00000638546 C18orf32Q8TCD1 76 aa12.52□□□□□ -0.4
HCG27-205ENST00000638546 ESM1Q9NQ30 184 aa12.52□□□□□ -0.4
HCG27-205ENST00000638546 SELENOKQ9Y6D0 94 aa12.52□□□□□ -0.4
HCG27-205ENST00000638546 LOC102724200A0A096LPH7 203 aaPredicted RBP12.51□□□□□ -0.41
HCG27-205ENST00000638546 IGLC6P0CF74 106 aa12.51□□□□□ -0.41
HCG27-205ENST00000638546 CTRLP40313 264 aa12.51□□□□□ -0.41
HCG27-205ENST00000638546 JOSD1Q15040 202 aaPredicted RBP12.51□□□□□ -0.41
HCG27-205ENST00000638546 ZNF575Q86XF7 245 aa12.51□□□□□ -0.41
HCG27-205ENST00000638546 OR8A1Q8NGG7 326 aa12.51□□□□□ -0.41
HCG27-205ENST00000638546 DCANP1Q8TF63 244 aa12.51□□□□□ -0.41
HCG27-205ENST00000638546 C4orf3Q8WVX3 66 aa12.51□□□□□ -0.41
HCG27-205ENST00000638546 PCP4L1A6NKN8 68 aa12.51□□□□□ -0.41
HCG27-205ENST00000638546 LINC01619G3V211 115 aa12.51□□□□□ -0.41
HCG27-205ENST00000638546 TCTEX1D4Q5JR98 221 aa12.51□□□□□ -0.41
HCG27-205ENST00000638546 C18orf65Q6ZTR6 163 aa12.51□□□□□ -0.41
HCG27-205ENST00000638546 WFDC3Q8IUB2 231 aa12.51□□□□□ -0.41
HCG27-205ENST00000638546 MS4A6AQ9H2W1 248 aa12.51□□□□□ -0.41
HCG27-205ENST00000638546 TMEM160Q9NX00 188 aa12.51□□□□□ -0.41
HCG27-205ENST00000638546 C2orf70A6NJV1 201 aa12.5□□□□□ -0.41
HCG27-205ENST00000638546 M0QZ24 198 aa12.5□□□□□ -0.41
HCG27-205ENST00000638546 IQCJQ1A5X6 159 aa12.5□□□□□ -0.41
HCG27-205ENST00000638546 ZNF493Q6ZR52 646 aa12.5□□□□□ -0.41
HCG27-205ENST00000638546 OR1N2Q8NGR9 330 aa12.5□□□□□ -0.41
HCG27-205ENST00000638546 DPF1Q92782 380 aa12.5□□□□□ -0.41
HCG27-205ENST00000638546 SAMD10Q9BYL1 202 aa12.5□□□□□ -0.41
HCG27-205ENST00000638546 TRBV7-9A0A0J9YWB2 115 aa12.49□□□□□ -0.41
HCG27-205ENST00000638546 PRR31Q5SQ13 230 aa12.49□□□□□ -0.41
HCG27-205ENST00000638546 KCNS1Q96KK3 526 aa12.49□□□□□ -0.41
HCG27-205ENST00000638546 FAM19A4Q96LR4 140 aa12.49□□□□□ -0.41
HCG27-205ENST00000638546 RCHY1Q96PM5 261 aa12.49□□□□□ -0.41
HCG27-205ENST00000638546 MXRA5Q9NR99 2828 aa12.49□□□□□ -0.41
HCG27-205ENST00000638546 FLNAP21333 2647 aaKnown RBP12.48□□□□□ -0.41
HCG27-205ENST00000638546 IGKV3D-20A0A0C4DH25 116 aa12.48□□□□□ -0.41
HCG27-205ENST00000638546 GPX1P07203 203 aa12.48□□□□□ -0.41
HCG27-205ENST00000638546 RNASE1P07998 156 aaKnown RBP12.48□□□□□ -0.41
HCG27-205ENST00000638546 SLURP1P55000 103 aa12.48□□□□□ -0.41
HCG27-205ENST00000638546 RIPPLY3P57055 190 aa12.48□□□□□ -0.41
HCG27-205ENST00000638546 DEFB1P60022 68 aa12.48□□□□□ -0.41
HCG27-205ENST00000638546 ZFAND2AQ8N6M9 145 aa12.48□□□□□ -0.41
HCG27-205ENST00000638546 WFDC12Q8WWY7 111 aa12.48□□□□□ -0.41
HCG27-205ENST00000638546 C11orf21Q9P2W6 132 aa12.48□□□□□ -0.41
HCG27-205ENST00000638546 OTOGQ6ZRI0 2925 aa12.48□□□□□ -0.41
HCG27-205ENST00000638546 F6UB75 175 aa12.48□□□□□ -0.41
HCG27-205ENST00000638546 K7EQG2 157 aa12.48□□□□□ -0.41
HCG27-205ENST00000638546 S100A12P80511 92 aa12.48□□□□□ -0.41
HCG27-205ENST00000638546 DEFB136Q30KP8 78 aa12.48□□□□□ -0.41
HCG27-205ENST00000638546 KHDC1LQ5JSQ8 128 aa12.48□□□□□ -0.41
HCG27-205ENST00000638546 TFPI2P48307 235 aa12.47□□□□□ -0.41
HCG27-205ENST00000638546 PRR9Q5T870 116 aa12.47□□□□□ -0.41
HCG27-205ENST00000638546 OR11H1Q8NG94 326 aa12.47□□□□□ -0.41
HCG27-205ENST00000638546 ZNF418Q8TF45 676 aaPredicted RBP12.47□□□□□ -0.41
HCG27-205ENST00000638546 C16orf95Q9H693 158 aa12.47□□□□□ -0.41
HCG27-205ENST00000638546 TRAV21A0A0B4J279 112 aa12.46□□□□□ -0.41
HCG27-205ENST00000638546 SSTP61278 116 aa12.46□□□□□ -0.41
HCG27-205ENST00000638546 SNRPD3P62318 126 aaKnown RBP12.46□□□□□ -0.41
HCG27-205ENST00000638546 TWIST1Q15672 202 aa12.46□□□□□ -0.41
HCG27-205ENST00000638546 CDPF1Q6NVV7 123 aa12.46□□□□□ -0.41
HCG27-205ENST00000638546 APRG1Q8IVJ8 170 aa12.46□□□□□ -0.41
HCG27-205ENST00000638546 KLHL30-AS1Q8NEE0 82 aa12.46□□□□□ -0.41
HCG27-205ENST00000638546 CNFNQ9BYD5 112 aa12.46□□□□□ -0.41
HCG27-205ENST00000638546 PEMTQ9UBM1 199 aa12.46□□□□□ -0.41
HCG27-205ENST00000638546 MUC21A0A0G2JKD1 596 aa12.45□□□□□ -0.42
HCG27-205ENST00000638546 MUC21A0A140T8X8 626 aa12.45□□□□□ -0.42
HCG27-205ENST00000638546 MUC21Q5SSG8 566 aa12.45□□□□□ -0.42
HCG27-205ENST00000638546 FAM104BQ5XKR9 115 aa12.45□□□□□ -0.42
HCG27-205ENST00000638546 NIT1Q86X76 327 aa12.45□□□□□ -0.42
HCG27-205ENST00000638546 ZNF324O75467 553 aaPredicted RBP12.44□□□□□ -0.42
HCG27-205ENST00000638546 ZNF688P0C7X2 276 aa12.44□□□□□ -0.42
HCG27-205ENST00000638546 PMCHP20382 165 aa12.44□□□□□ -0.42
HCG27-205ENST00000638546 NTF3P20783 257 aa12.44□□□□□ -0.42
HCG27-205ENST00000638546 AMTP48728 403 aa12.44□□□□□ -0.42
HCG27-205ENST00000638546 ADAMTSL5Q6ZMM2 481 aa12.44□□□□□ -0.42
HCG27-205ENST00000638546 Q6ZWC4 215 aa12.44□□□□□ -0.42
HCG27-205ENST00000638546 GSN-AS1Q9NRJ2 163 aa12.44□□□□□ -0.42
HCG27-205ENST00000638546 ANK3Q12955 4377 aaKnown RBP12.44□□□□□ -0.42
HCG27-205ENST00000638546 J3KRW8 73 aa12.44□□□□□ -0.42
HCG27-205ENST00000638546 RNASE4P34096 147 aaKnown RBP12.44□□□□□ -0.42
HCG27-205ENST00000638546 PSMG4Q5JS54 123 aa12.44□□□□□ -0.42
HCG27-205ENST00000638546 RNASEKQ6P5S7 137 aaKnown RBP12.44□□□□□ -0.42
HCG27-205ENST00000638546 OR9G4Q8NGQ1 327 aa12.44□□□□□ -0.42
HCG27-205ENST00000638546 HSBP1O75506 76 aa12.43□□□□□ -0.42
HCG27-205ENST00000638546 Q6ZQT7 251 aa12.43□□□□□ -0.42
HCG27-205ENST00000638546 DUX3Q96PT4 197 aa12.43□□□□□ -0.42
HCG27-205ENST00000638546 TMEM191AQ9H0A3 160 aa12.43□□□□□ -0.42
HCG27-205ENST00000638546 U3KQK5 164 aa12.43□□□□□ -0.42
HCG27-205ENST00000638546 SCGB1D1O95968 90 aa12.42□□□□□ -0.42
HCG27-205ENST00000638546 HILS1P60008 231 aa12.42□□□□□ -0.42
HCG27-205ENST00000638546 DMRTA1Q5VZB9 504 aa12.42□□□□□ -0.42
HCG27-205ENST00000638546 DLX4Q92988 240 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms