RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 TREM1Q9NP99 234 aa14.05□□□□□ -0.16
HLA-A-209ENST00000638375 U3KQK5 164 aa14.05□□□□□ -0.16
HLA-A-209ENST00000638375 TENM3Q9P273 2699 aa14.05□□□□□ -0.16
HLA-A-209ENST00000638375 TRBV6-1A0A0K0K1D8 114 aa14.04□□□□□ -0.16
HLA-A-209ENST00000638375 PDE6DO43924 150 aa14.04□□□□□ -0.16
HLA-A-209ENST00000638375 UBE2G1P62253 170 aa14.04□□□□□ -0.16
HLA-A-209ENST00000638375 C20orf144Q9BQM9 153 aa14.04□□□□□ -0.16
HLA-A-209ENST00000638375 NDFIP1Q9BT67 221 aa14.04□□□□□ -0.16
HLA-A-209ENST00000638375 DERL1Q9BUN8 251 aa14.04□□□□□ -0.16
HLA-A-209ENST00000638375 ZNF324O75467 553 aaPredicted RBP14.03□□□□□ -0.16
HLA-A-209ENST00000638375 LINC01587Q99440 93 aa14.03□□□□□ -0.16
HLA-A-209ENST00000638375 NEU1Q99519 415 aa14.03□□□□□ -0.16
HLA-A-209ENST00000638375 TMEM208Q9BTX3 173 aa14.03□□□□□ -0.16
HLA-A-209ENST00000638375 COL7A1Q02388 2944 aa14.02□□□□□ -0.16
HLA-A-209ENST00000638375 LTAP01374 205 aa14.02□□□□□ -0.17
HLA-A-209ENST00000638375 PRM2P04554 102 aa14.02□□□□□ -0.17
HLA-A-209ENST00000638375 RAB14P61106 215 aa14.02□□□□□ -0.17
HLA-A-209ENST00000638375 CLLU1Q5K131 121 aa14.02□□□□□ -0.17
HLA-A-209ENST00000638375 SAPCD1Q5SSQ6 148 aa14.02□□□□□ -0.17
HLA-A-209ENST00000638375 Q6AWC8 147 aa14.02□□□□□ -0.17
HLA-A-209ENST00000638375 TMEM256Q8N2U0 113 aa14.02□□□□□ -0.17
HLA-A-209ENST00000638375 Q8NAQ8 132 aa14.02□□□□□ -0.17
HLA-A-209ENST00000638375 NIPSNAP3BQ9BS92 247 aa14.02□□□□□ -0.17
HLA-A-209ENST00000638375 EIF5A2Q9GZV4 153 aaKnown RBP14.02□□□□□ -0.17
HLA-A-209ENST00000638375 H7BYZ3 331 aa14.01□□□□□ -0.17
HLA-A-209ENST00000638375 S100A9P06702 114 aaKnown RBP14.01□□□□□ -0.17
HLA-A-209ENST00000638375 RPL35P42766 123 aaKnown RBP14.01□□□□□ -0.17
HLA-A-209ENST00000638375 ZNF80P51504 273 aaPredicted RBP14.01□□□□□ -0.17
HLA-A-209ENST00000638375 MED9Q9NWA0 146 aa14.01□□□□□ -0.17
HLA-A-209ENST00000638375 IGHV4-28A0A0C4DH34 117 aa14□□□□□ -0.17
HLA-A-209ENST00000638375 ZNF705GA8MUZ8 300 aaPredicted RBP14□□□□□ -0.17
HLA-A-209ENST00000638375 MIFP14174 115 aa14□□□□□ -0.17
HLA-A-209ENST00000638375 SMUG1Q53HV7 270 aa14□□□□□ -0.17
HLA-A-209ENST00000638375 ZFP30Q9Y2G7 519 aa14□□□□□ -0.17
HLA-A-209ENST00000638375 SMIM9A6NGZ8 99 aa13.99□□□□□ -0.17
HLA-A-209ENST00000638375 DEFB4AO15263 64 aa13.99□□□□□ -0.17
HLA-A-209ENST00000638375 GCGP01275 180 aa13.99□□□□□ -0.17
HLA-A-209ENST00000638375 TAS2R60P59551 318 aa13.99□□□□□ -0.17
HLA-A-209ENST00000638375 COX8CQ7Z4L0 72 aa13.99□□□□□ -0.17
HLA-A-209ENST00000638375 A0A0J9YWU9 116 aa13.98□□□□□ -0.17
HLA-A-209ENST00000638375 RAB19A4D1S5 217 aa13.98□□□□□ -0.17
HLA-A-209ENST00000638375 TMEM250H0YL14 139 aa13.98□□□□□ -0.17
HLA-A-209ENST00000638375 RGS13O14921 159 aa13.98□□□□□ -0.17
HLA-A-209ENST00000638375 AZU1P20160 251 aa13.98□□□□□ -0.17
HLA-A-209ENST00000638375 SRSF3P84103 164 aaKnown RBP13.98□□□□□ -0.17
HLA-A-209ENST00000638375 RRN3P1Q2M238 152 aa13.98□□□□□ -0.17
HLA-A-209ENST00000638375 BAGE2Q86Y30 109 aa13.98□□□□□ -0.17
HLA-A-209ENST00000638375 NHLRC2Q8NBF2 726 aa13.98□□□□□ -0.17
HLA-A-209ENST00000638375 ZC2HC1AQ96GY0 325 aa13.98□□□□□ -0.17
HLA-A-209ENST00000638375 PYGO2Q9BRQ0 406 aa13.98□□□□□ -0.17
HLA-A-209ENST00000638375 TRAV21A0A0B4J279 112 aa13.97□□□□□ -0.17
HLA-A-209ENST00000638375 NDUFS6O75380 124 aaKnown RBP13.97□□□□□ -0.17
HLA-A-209ENST00000638375 SRP19P09132 144 aaKnown RBP13.97□□□□□ -0.17
HLA-A-209ENST00000638375 HTN1P15515 57 aa13.97□□□□□ -0.17
HLA-A-209ENST00000638375 TMEM183AQ8IXX5 376 aa13.97□□□□□ -0.17
HLA-A-209ENST00000638375 LINC00467Q9BRT7 94 aa13.97□□□□□ -0.17
HLA-A-209ENST00000638375 MLST8Q9BVC4 326 aa13.97□□□□□ -0.17
HLA-A-209ENST00000638375 C11orf68Q9H3H3 251 aaKnown RBP13.97□□□□□ -0.17
HLA-A-209ENST00000638375 EDA2RQ9HAV5 297 aa13.97□□□□□ -0.17
HLA-A-209ENST00000638375 TRBV20OR9-2A0A075B6H5 130 aa13.96□□□□□ -0.17
HLA-A-209ENST00000638375 IGHV1OR15-1A0A075B7D0 117 aa13.96□□□□□ -0.17
HLA-A-209ENST00000638375 C9JQL5 133 aa13.96□□□□□ -0.17
HLA-A-209ENST00000638375 CRIP1P50238 77 aa13.96□□□□□ -0.17
HLA-A-209ENST00000638375 CENPWQ5EE01 88 aa13.96□□□□□ -0.17
HLA-A-209ENST00000638375 MUC21Q5SSG8 566 aa13.96□□□□□ -0.17
HLA-A-209ENST00000638375 PARLQ9H300 379 aa13.96□□□□□ -0.17
HLA-A-209ENST00000638375 PFN1P07737 140 aaKnown RBP13.95□□□□□ -0.18
HLA-A-209ENST00000638375 C11orf21Q9P2W6 132 aa13.95□□□□□ -0.18
HLA-A-209ENST00000638375 PLAC8L1A1L4L8 177 aa13.94□□□□□ -0.18
HLA-A-209ENST00000638375 IGLV2-8P01709 118 aa13.94□□□□□ -0.18
HLA-A-209ENST00000638375 CEBPGP53567 150 aa13.94□□□□□ -0.18
HLA-A-209ENST00000638375 ZNF674Q2M3X9 581 aa13.94□□□□□ -0.18
HLA-A-209ENST00000638375 EIF4E3Q8N5X7 224 aaKnown RBP13.94□□□□□ -0.18
HLA-A-209ENST00000638375 RNASE8Q8TDE3 154 aaKnown RBP13.94□□□□□ -0.18
HLA-A-209ENST00000638375 NAGKQ9UJ70 344 aa13.94□□□□□ -0.18
HLA-A-209ENST00000638375 TP53TG3Q9ULZ0 132 aa13.94□□□□□ -0.18
HLA-A-209ENST00000638375 TGP01266 2768 aa13.94□□□□□ -0.18
HLA-A-209ENST00000638375 PGPEP1LA6NFU8 196 aa13.93□□□□□ -0.18
HLA-A-209ENST00000638375 GNG4P50150 75 aa13.93□□□□□ -0.18
HLA-A-209ENST00000638375 PEA15Q15121 130 aa13.93□□□□□ -0.18
HLA-A-209ENST00000638375 ANXA2RQ3ZCQ2 193 aa13.93□□□□□ -0.18
HLA-A-209ENST00000638375 TMEM263Q8WUH6 116 aaKnown RBP13.93□□□□□ -0.18
HLA-A-209ENST00000638375 CBY3A6NI87 242 aa13.92□□□□□ -0.18
HLA-A-209ENST00000638375 SH2D1AO60880 128 aa13.92□□□□□ -0.18
HLA-A-209ENST00000638375 EMP1P54849 157 aa13.92□□□□□ -0.18
HLA-A-209ENST00000638375 TDRG1Q3Y452 100 aa13.92□□□□□ -0.18
HLA-A-209ENST00000638375 C16orf74Q96GX8 76 aa13.92□□□□□ -0.18
HLA-A-209ENST00000638375 STAB2Q8WWQ8 2551 aa13.92□□□□□ -0.18
HLA-A-209ENST00000638375 TMEM189A5PLL7 270 aa13.91□□□□□ -0.18
HLA-A-209ENST00000638375 FABP5P3A8MUU1 101 aa13.91□□□□□ -0.18
HLA-A-209ENST00000638375 C9JCJ5 164 aa13.91□□□□□ -0.18
HLA-A-209ENST00000638375 FAM162BQ5T6X4 162 aa13.91□□□□□ -0.18
HLA-A-209ENST00000638375 FAM159AQ6UWV7 190 aa13.91□□□□□ -0.18
HLA-A-209ENST00000638375 ZNF493Q6ZR52 646 aa13.91□□□□□ -0.18
HLA-A-209ENST00000638375 SMDT1Q9H4I9 107 aa13.91□□□□□ -0.18
HLA-A-209ENST00000638375 CELA1Q9UNI1 258 aa13.91□□□□□ -0.18
HLA-A-209ENST00000638375 C11orf72Q8NBR9 251 aa13.9□□□□□ -0.18
HLA-A-209ENST00000638375 SMIM12Q96EX1 92 aa13.9□□□□□ -0.18
HLA-A-209ENST00000638375 IGKV3D-20A0A0C4DH25 116 aa13.89□□□□□ -0.19
HLA-A-209ENST00000638375 GNRH2O43555 120 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms