RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 HIGD1BQ9P298 99 aa15.5■□□□□ 0.07
SYNGAP1-227ENST00000638142 SPCS1Q9Y6A9 102 aa15.5■□□□□ 0.07
SYNGAP1-227ENST00000638142 DCHS2Q6V1P9 2916 aa15.49■□□□□ 0.07
SYNGAP1-227ENST00000638142 PPIFP30405 207 aaKnown RBP15.49■□□□□ 0.07
SYNGAP1-227ENST00000638142 AGPAT4-IT1Q9H0P7 198 aa15.49■□□□□ 0.07
SYNGAP1-227ENST00000638142 SMPXQ9UHP9 88 aa15.49■□□□□ 0.07
SYNGAP1-227ENST00000638142 HHLA3Q9XRX5 114 aa15.49■□□□□ 0.07
SYNGAP1-227ENST00000638142 LRBAP50851 2863 aa15.49■□□□□ 0.07
SYNGAP1-227ENST00000638142 PRSS1P07477 247 aa15.49■□□□□ 0.07
SYNGAP1-227ENST00000638142 ATP5LO75964 103 aa15.48■□□□□ 0.07
SYNGAP1-227ENST00000638142 UBE2E1P51965 193 aa15.48■□□□□ 0.07
SYNGAP1-227ENST00000638142 CCDC140Q96MF4 163 aa15.48■□□□□ 0.07
SYNGAP1-227ENST00000638142 HIF1ANQ9NWT6 349 aa15.48■□□□□ 0.07
SYNGAP1-227ENST00000638142 FABP2P12104 132 aa15.48■□□□□ 0.07
SYNGAP1-227ENST00000638142 TMEM78Q5T7P6 136 aa15.48■□□□□ 0.07
SYNGAP1-227ENST00000638142 TMEM158Q8WZ71 300 aa15.48■□□□□ 0.07
SYNGAP1-227ENST00000638142 PTPRQQ9UMZ3 2332 aa15.47■□□□□ 0.07
SYNGAP1-227ENST00000638142 IGLV2-18A0A075B6J9 118 aa15.47■□□□□ 0.07
SYNGAP1-227ENST00000638142 IGKCP01834 107 aa15.47■□□□□ 0.07
SYNGAP1-227ENST00000638142 SMIM13P0DJ93 91 aa15.47■□□□□ 0.07
SYNGAP1-227ENST00000638142 GATA1P15976 413 aaPredicted RBP15.47■□□□□ 0.07
SYNGAP1-227ENST00000638142 RIPPLY3P57055 190 aa15.47■□□□□ 0.07
SYNGAP1-227ENST00000638142 CLEC19AQ6UXS0 136 aa15.47■□□□□ 0.07
SYNGAP1-227ENST00000638142 C11orf21Q9P2W6 132 aa15.47■□□□□ 0.07
SYNGAP1-227ENST00000638142 EEF1AKMT3Q96AZ1 226 aa15.46■□□□□ 0.07
SYNGAP1-227ENST00000638142 AJUBAQ96IF1 538 aa15.46■□□□□ 0.07
SYNGAP1-227ENST00000638142 METTL26Q96S19 204 aa15.46■□□□□ 0.07
SYNGAP1-227ENST00000638142 TRAV8-2A0A0B4J237 113 aa15.46■□□□□ 0.07
SYNGAP1-227ENST00000638142 IGHV3-66A0A0C4DH42 116 aa15.46■□□□□ 0.07
SYNGAP1-227ENST00000638142 PRSS47A8MTI9 375 aa15.46■□□□□ 0.07
SYNGAP1-227ENST00000638142 IGKV2D-26A0A0A0MRZ7 120 aa15.45■□□□□ 0.06
SYNGAP1-227ENST00000638142 TRBV7-1A0A0A6YYK4 115 aa15.45■□□□□ 0.06
SYNGAP1-227ENST00000638142 DPM2O94777 84 aa15.45■□□□□ 0.06
SYNGAP1-227ENST00000638142 SMIM17P0DL12 118 aa15.45■□□□□ 0.06
SYNGAP1-227ENST00000638142 SAMD5Q5TGI4 173 aa15.45■□□□□ 0.06
SYNGAP1-227ENST00000638142 FOXC2Q99958 501 aa15.45■□□□□ 0.06
SYNGAP1-227ENST00000638142 WNK2Q9Y3S1 2297 aa15.45■□□□□ 0.06
SYNGAP1-227ENST00000638142 IGHV7-4-1A0A0J9YVY3 117 aa15.44■□□□□ 0.06
SYNGAP1-227ENST00000638142 TRGV3P03979 118 aa15.44■□□□□ 0.06
SYNGAP1-227ENST00000638142 C9orf47Q6ZRZ4 202 aa15.44■□□□□ 0.06
SYNGAP1-227ENST00000638142 C8orf86Q6ZUL3 223 aa15.44■□□□□ 0.06
SYNGAP1-227ENST00000638142 SELENOKQ9Y6D0 94 aa15.44■□□□□ 0.06
SYNGAP1-227ENST00000638142 IGHV4-4A0A075B6R2 117 aa15.43■□□□□ 0.06
SYNGAP1-227ENST00000638142 HLA-DRB4P13762 266 aa15.43■□□□□ 0.06
SYNGAP1-227ENST00000638142 HLA-DRB4X5D2U9 266 aa15.43■□□□□ 0.06
SYNGAP1-227ENST00000638142 G3V318 75 aa15.43■□□□□ 0.06
SYNGAP1-227ENST00000638142 SAA4P35542 130 aa15.43■□□□□ 0.06
SYNGAP1-227ENST00000638142 NRACQ8N912 160 aa15.43■□□□□ 0.06
SYNGAP1-227ENST00000638142 U3KQE9 123 aa15.43■□□□□ 0.06
SYNGAP1-227ENST00000638142 IGHV3OR16-13A0A075B7E8 117 aa15.42■□□□□ 0.06
SYNGAP1-227ENST00000638142 IGHV3-74A0A0B4J1X5 117 aa15.42■□□□□ 0.06
SYNGAP1-227ENST00000638142 TMEM238C9JI98 176 aa15.42■□□□□ 0.06
SYNGAP1-227ENST00000638142 GCSHP23434 173 aa15.42■□□□□ 0.06
SYNGAP1-227ENST00000638142 FXYD2P54710 66 aa15.42■□□□□ 0.06
SYNGAP1-227ENST00000638142 CHAC1Q9BUX1 264 aa15.42■□□□□ 0.06
SYNGAP1-227ENST00000638142 KLRB1Q12918 225 aa15.42■□□□□ 0.06
SYNGAP1-227ENST00000638142 LAGE3Q14657 143 aa15.42■□□□□ 0.06
SYNGAP1-227ENST00000638142 SPTA1P02549 2419 aa15.42■□□□□ 0.06
SYNGAP1-227ENST00000638142 TM4SF20Q53R12 229 aa15.41■□□□□ 0.06
SYNGAP1-227ENST00000638142 MYOZ3Q8TDC0 251 aa15.41■□□□□ 0.06
SYNGAP1-227ENST00000638142 CEP295Q9C0D2 2601 aa15.41■□□□□ 0.06
SYNGAP1-227ENST00000638142 CENPVL3A0A0U1RRI6 287 aa15.41■□□□□ 0.06
SYNGAP1-227ENST00000638142 TMEM8BA6NDV4 472 aa15.41■□□□□ 0.06
SYNGAP1-227ENST00000638142 ZC2HC1BQ5TFG8 222 aa15.41■□□□□ 0.06
SYNGAP1-227ENST00000638142 UFC1Q9Y3C8 167 aa15.4■□□□□ 0.06
SYNGAP1-227ENST00000638142 SPANXN1Q5VSR9 72 aa15.4■□□□□ 0.06
SYNGAP1-227ENST00000638142 GTSCR1Q86UQ5 136 aa15.4■□□□□ 0.06
SYNGAP1-227ENST00000638142 ATP6V0BQ99437 205 aa15.4■□□□□ 0.06
SYNGAP1-227ENST00000638142 HRNRQ86YZ3 2850 aaPredicted RBP15.39■□□□□ 0.05
SYNGAP1-227ENST00000638142 TRBV25-1A0A075B6N4 114 aa15.39■□□□□ 0.05
SYNGAP1-227ENST00000638142 IGHV3-49A0A0A0MS15 119 aa15.39■□□□□ 0.05
SYNGAP1-227ENST00000638142 LINC01548A6NM66 108 aa15.39■□□□□ 0.05
SYNGAP1-227ENST00000638142 PHLDA1Q8WV24 401 aaPredicted RBP15.39■□□□□ 0.05
SYNGAP1-227ENST00000638142 TM2D2Q9BX73 214 aa15.39■□□□□ 0.05
SYNGAP1-227ENST00000638142 TTTY13Q9BZ97 58 aa15.39■□□□□ 0.05
SYNGAP1-227ENST00000638142 CSMD1Q96PZ7 3565 aa15.39■□□□□ 0.05
SYNGAP1-227ENST00000638142 ZNF207O43670 478 aaKnown RBP15.39■□□□□ 0.05
SYNGAP1-227ENST00000638142 LENEPQ9Y5L5 61 aa15.39■□□□□ 0.05
SYNGAP1-227ENST00000638142 ATP5G2Q06055 141 aa15.38■□□□□ 0.05
SYNGAP1-227ENST00000638142 SRSF1Q07955 248 aaKnown RBP eCLIP15.38■□□□□ 0.05
SYNGAP1-227ENST00000638142 TRAV26-2A0A0B4J265 109 aa15.38■□□□□ 0.05
SYNGAP1-227ENST00000638142 C5orf56Q8N8D9 126 aa15.38■□□□□ 0.05
SYNGAP1-227ENST00000638142 MRAP2Q96G30 205 aa15.38■□□□□ 0.05
SYNGAP1-227ENST00000638142 TMEM160Q9NX00 188 aa15.38■□□□□ 0.05
SYNGAP1-227ENST00000638142 MRPL35Q9NZE8 188 aaKnown RBP15.38■□□□□ 0.05
SYNGAP1-227ENST00000638142 C9orf139Q6ZV77 190 aa15.37■□□□□ 0.05
SYNGAP1-227ENST00000638142 C16orf92Q96LL3 132 aa15.37■□□□□ 0.05
SYNGAP1-227ENST00000638142 A0A087WX48 190 aa15.37■□□□□ 0.05
SYNGAP1-227ENST00000638142 TRAV40A0A0B4J280 105 aa15.37■□□□□ 0.05
SYNGAP1-227ENST00000638142 A0A1W2PPR1 153 aa15.37■□□□□ 0.05
SYNGAP1-227ENST00000638142 NPFFO15130 113 aa15.36■□□□□ 0.05
SYNGAP1-227ENST00000638142 UCNP55089 124 aa15.36■□□□□ 0.05
SYNGAP1-227ENST00000638142 CEND1Q8N111 149 aa15.36■□□□□ 0.05
SYNGAP1-227ENST00000638142 EFNA4P52798 201 aa15.36■□□□□ 0.05
SYNGAP1-227ENST00000638142 H3BVH4 76 aa15.35■□□□□ 0.05
SYNGAP1-227ENST00000638142 PLNP26678 52 aa15.35■□□□□ 0.05
SYNGAP1-227ENST00000638142 GLMPQ8WWB7 406 aa15.35■□□□□ 0.05
SYNGAP1-227ENST00000638142 FAM223BA6NKX1 122 aa15.35■□□□□ 0.05
SYNGAP1-227ENST00000638142 K7ERJ3 54 aa15.35■□□□□ 0.05
SYNGAP1-227ENST00000638142 FAM223AQ8IWN6 122 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms