RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 ZNF575Q86XF7 245 aa14.11□□□□□ -0.15
CLN8-211ENST00000636934 PSMG3-AS1Q96PY0 264 aa14.11□□□□□ -0.15
CLN8-211ENST00000636934 IGKV3D-20A0A0C4DH25 116 aa14.1□□□□□ -0.15
CLN8-211ENST00000636934 MUC21A0A0G2JKD1 596 aa14.1□□□□□ -0.15
CLN8-211ENST00000636934 MUC21A0A140T8X8 626 aa14.1□□□□□ -0.15
CLN8-211ENST00000636934 A1L4Q6 167 aa14.1□□□□□ -0.15
CLN8-211ENST00000636934 MUC21Q5SSG8 566 aa14.1□□□□□ -0.15
CLN8-211ENST00000636934 C20orf173Q96LM9 149 aa14.1□□□□□ -0.15
CLN8-211ENST00000636934 RHPN1-AS1Q9BWJ2 59 aa14.1□□□□□ -0.15
CLN8-211ENST00000636934 SIGLEC8Q9NYZ4 499 aa14.1□□□□□ -0.15
CLN8-211ENST00000636934 FAM208BQ5VWN6 2430 aa14.09□□□□□ -0.15
CLN8-211ENST00000636934 A0A1B0GV90 55 aa14.09□□□□□ -0.15
CLN8-211ENST00000636934 OR4C46A6NHA9 309 aa14.09□□□□□ -0.15
CLN8-211ENST00000636934 PSMB8P28062 276 aa14.09□□□□□ -0.15
CLN8-211ENST00000636934 IFI27P40305 119 aaPredicted RBP14.09□□□□□ -0.15
CLN8-211ENST00000636934 RPL11P62913 178 aaKnown RBP14.09□□□□□ -0.15
CLN8-211ENST00000636934 CACNG7P62955 275 aa14.09□□□□□ -0.15
CLN8-211ENST00000636934 SRSF1Q07955 248 aaKnown RBP eCLIP14.09□□□□□ -0.15
CLN8-211ENST00000636934 GPHB5Q86YW7 130 aa14.09□□□□□ -0.15
CLN8-211ENST00000636934 ATOH7Q8N100 152 aa14.09□□□□□ -0.15
CLN8-211ENST00000636934 ZMAT5Q9UDW3 170 aaKnown RBP14.09□□□□□ -0.15
CLN8-211ENST00000636934 SMPXQ9UHP9 88 aa14.09□□□□□ -0.15
CLN8-211ENST00000636934 UFC1Q9Y3C8 167 aa14.09□□□□□ -0.15
CLN8-211ENST00000636934 MYO18BQ8IUG5 2567 aa14.09□□□□□ -0.15
CLN8-211ENST00000636934 SPG11Q96JI7 2443 aa14.09□□□□□ -0.15
CLN8-211ENST00000636934 TRBV7-9A0A0J9YWB2 115 aa14.09□□□□□ -0.15
CLN8-211ENST00000636934 RNF223E7ERA6 249 aa14.08□□□□□ -0.16
CLN8-211ENST00000636934 FSHBP01225 129 aa14.08□□□□□ -0.16
CLN8-211ENST00000636934 VPREB3Q9UKI3 123 aa14.08□□□□□ -0.16
CLN8-211ENST00000636934 LOC389332A0A1B0GUA5 103 aa14.07□□□□□ -0.16
CLN8-211ENST00000636934 HSBP1L1C9JCN9 74 aa14.07□□□□□ -0.16
CLN8-211ENST00000636934 TCF21O43680 179 aa14.07□□□□□ -0.16
CLN8-211ENST00000636934 ID1P41134 155 aa14.07□□□□□ -0.16
CLN8-211ENST00000636934 DEFB113Q30KQ7 82 aa14.07□□□□□ -0.16
CLN8-211ENST00000636934 LCNL1Q6ZST4 164 aa14.07□□□□□ -0.16
CLN8-211ENST00000636934 LINC00173Q6ZV60 143 aa14.07□□□□□ -0.16
CLN8-211ENST00000636934 SPATA12Q7Z6I5 190 aa14.07□□□□□ -0.16
CLN8-211ENST00000636934 MAP1LC3AQ9H492 121 aa14.07□□□□□ -0.16
CLN8-211ENST00000636934 C11orf21Q9P2W6 132 aa14.07□□□□□ -0.16
CLN8-211ENST00000636934 COL12A1Q99715 3063 aa14.07□□□□□ -0.16
CLN8-211ENST00000636934 TRAV21A0A0B4J279 112 aa14.06□□□□□ -0.16
CLN8-211ENST00000636934 IGHV4-31P0DP07 118 aa14.06□□□□□ -0.16
CLN8-211ENST00000636934 HNRNPA3P51991 378 aaKnown RBP14.06□□□□□ -0.16
CLN8-211ENST00000636934 FOXE3Q13461 319 aa14.06□□□□□ -0.16
CLN8-211ENST00000636934 TM4SF20Q53R12 229 aa14.06□□□□□ -0.16
CLN8-211ENST00000636934 Q6ZN92 141 aa14.06□□□□□ -0.16
CLN8-211ENST00000636934 RNF185Q96GF1 192 aa14.06□□□□□ -0.16
CLN8-211ENST00000636934 ZNF747Q9BV97 191 aa14.06□□□□□ -0.16
CLN8-211ENST00000636934 ST20Q9HBF5 79 aa14.06□□□□□ -0.16
CLN8-211ENST00000636934 IGHV4-4A0A075B6R2 117 aa14.06□□□□□ -0.16
CLN8-211ENST00000636934 SNAI2O43623 268 aa14.05□□□□□ -0.16
CLN8-211ENST00000636934 NPYP01303 97 aa14.05□□□□□ -0.16
CLN8-211ENST00000636934 NUTF2P61970 127 aaKnown RBP14.05□□□□□ -0.16
CLN8-211ENST00000636934 TMEM95Q3KNT9 176 aa14.05□□□□□ -0.16
CLN8-211ENST00000636934 Q6YL49 198 aa14.05□□□□□ -0.16
CLN8-211ENST00000636934 MSRB1Q9NZV6 116 aa14.05□□□□□ -0.16
CLN8-211ENST00000636934 HBDP02042 147 aa14.04□□□□□ -0.16
CLN8-211ENST00000636934 IGLL1P15814 213 aa14.04□□□□□ -0.16
CLN8-211ENST00000636934 LINC01545Q5VT33 79 aa14.04□□□□□ -0.16
CLN8-211ENST00000636934 OR8A1Q8NGG7 326 aa14.04□□□□□ -0.16
CLN8-211ENST00000636934 ELANEP08246 267 aa14.04□□□□□ -0.16
CLN8-211ENST00000636934 Q5PR19 223 aa14.04□□□□□ -0.16
CLN8-211ENST00000636934 MAPK1IP1LQ8NDC0 245 aa14.04□□□□□ -0.16
CLN8-211ENST00000636934 NXT2Q9NPJ8 142 aaKnown RBP14.04□□□□□ -0.16
CLN8-211ENST00000636934 TIMM8BQ9Y5J9 83 aaPredicted RBP14.04□□□□□ -0.16
CLN8-211ENST00000636934 SMKR1H3BMG3 65 aa14.03□□□□□ -0.16
CLN8-211ENST00000636934 MAJINQ3KP22 176 aa14.03□□□□□ -0.16
CLN8-211ENST00000636934 SPANXN1Q5VSR9 72 aa14.03□□□□□ -0.16
CLN8-211ENST00000636934 PRSS57Q6UWY2 283 aa14.03□□□□□ -0.16
CLN8-211ENST00000636934 ZFAND2AQ8N6M9 145 aa14.03□□□□□ -0.16
CLN8-211ENST00000636934 MRPS16Q9Y3D3 137 aaKnown RBP14.03□□□□□ -0.16
CLN8-211ENST00000636934 NCR2O95944 276 aa14.02□□□□□ -0.16
CLN8-211ENST00000636934 APRG1Q8IVJ8 170 aa14.02□□□□□ -0.16
CLN8-211ENST00000636934 FAM19A4Q96LR4 140 aa14.02□□□□□ -0.16
CLN8-211ENST00000636934 MS4A6AQ9H2W1 248 aa14.02□□□□□ -0.16
CLN8-211ENST00000636934 CSMD1Q96PZ7 3565 aa14.02□□□□□ -0.16
CLN8-211ENST00000636934 ZNF462Q96JM2 2506 aa14.02□□□□□ -0.17
CLN8-211ENST00000636934 LINC01546A6NGU7 62 aa14.01□□□□□ -0.17
CLN8-211ENST00000636934 RPLP1P05386 114 aaKnown RBP14.01□□□□□ -0.17
CLN8-211ENST00000636934 MED14OSP0DP75 135 aa14.01□□□□□ -0.17
CLN8-211ENST00000636934 PRR9Q5T870 116 aa14.01□□□□□ -0.17
CLN8-211ENST00000636934 LINC00469Q8N7U9 141 aa14.01□□□□□ -0.17
CLN8-211ENST00000636934 TNFRSF6BO95407 300 aa14.01□□□□□ -0.17
CLN8-211ENST00000636934 ANKRD17O75179 2603 aaKnown RBP14□□□□□ -0.17
CLN8-211ENST00000636934 UBR5O95071 2799 aaPredicted RBP14□□□□□ -0.17
CLN8-211ENST00000636934 A0A096LNJ9 63 aa14□□□□□ -0.17
CLN8-211ENST00000636934 TSPOP30536 169 aa14□□□□□ -0.17
CLN8-211ENST00000636934 H3BVH4 76 aa13.99□□□□□ -0.17
CLN8-211ENST00000636934 LGALS1P09382 135 aaKnown RBP13.99□□□□□ -0.17
CLN8-211ENST00000636934 ASIPP42127 132 aa13.99□□□□□ -0.17
CLN8-211ENST00000636934 KRTAP10-9P60411 292 aa13.99□□□□□ -0.17
CLN8-211ENST00000636934 FASNP49327 2511 aaKnown RBP13.99□□□□□ -0.17
CLN8-211ENST00000636934 IGKV3-7A0A075B6H7 116 aa13.99□□□□□ -0.17
CLN8-211ENST00000636934 H0Y8G0 127 aa13.99□□□□□ -0.17
CLN8-211ENST00000636934 S100A4P26447 101 aaKnown RBP13.99□□□□□ -0.17
CLN8-211ENST00000636934 COL5A1-AS1Q5SY13 56 aa13.99□□□□□ -0.17
CLN8-211ENST00000636934 MYOZ3Q8TDC0 251 aa13.99□□□□□ -0.17
CLN8-211ENST00000636934 ZNF702PQ9H963 129 aa13.99□□□□□ -0.17
CLN8-211ENST00000636934 LGALS9O00182 355 aa13.98□□□□□ -0.17
CLN8-211ENST00000636934 LGALS9BQ3B8N2 356 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms