RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 K7EP34 96 aa11.21□□□□□ -0.62
CLN6-215ENST00000636674 K7ERU9 68 aa11.21□□□□□ -0.62
CLN6-215ENST00000636674 GOSR1O95249 250 aa11.21□□□□□ -0.62
CLN6-215ENST00000636674 LEPP41159 167 aa11.21□□□□□ -0.62
CLN6-215ENST00000636674 UQCRFS1P47985 274 aa11.21□□□□□ -0.62
CLN6-215ENST00000636674 ERCC8Q13216 396 aa11.21□□□□□ -0.62
CLN6-215ENST00000636674 Q8N8P6 123 aa11.21□□□□□ -0.62
CLN6-215ENST00000636674 HIF1ANQ9NWT6 349 aa11.21□□□□□ -0.62
CLN6-215ENST00000636674 SMPXQ9UHP9 88 aa11.21□□□□□ -0.62
CLN6-215ENST00000636674 NMUP48645 174 aa11.2□□□□□ -0.62
CLN6-215ENST00000636674 ADORA2A-AS1P86434 159 aa11.2□□□□□ -0.62
CLN6-215ENST00000636674 RNF151Q2KHN1 245 aa11.2□□□□□ -0.62
CLN6-215ENST00000636674 IL17RELQ6ZVW7 336 aa11.2□□□□□ -0.62
CLN6-215ENST00000636674 HHLA3Q9XRX5 114 aa11.2□□□□□ -0.62
CLN6-215ENST00000636674 TACC2O95359 2948 aa11.2□□□□□ -0.62
CLN6-215ENST00000636674 BAHCC1Q9P281 2608 aa11.2□□□□□ -0.62
CLN6-215ENST00000636674 MYO18BQ8IUG5 2567 aa11.2□□□□□ -0.62
CLN6-215ENST00000636674 IGKV3D-20A0A0C4DH25 116 aa11.19□□□□□ -0.62
CLN6-215ENST00000636674 ATP5LO75964 103 aa11.19□□□□□ -0.62
CLN6-215ENST00000636674 GAS8-AS1O95177 125 aa11.19□□□□□ -0.62
CLN6-215ENST00000636674 EVI2AP22794 236 aa11.19□□□□□ -0.62
CLN6-215ENST00000636674 ZFP36P26651 326 aaKnown RBP11.19□□□□□ -0.62
CLN6-215ENST00000636674 CDSNQ15517 529 aa11.19□□□□□ -0.62
CLN6-215ENST00000636674 CCDC140Q96MF4 163 aa11.19□□□□□ -0.62
CLN6-215ENST00000636674 ABCA4P78363 2273 aa11.19□□□□□ -0.62
CLN6-215ENST00000636674 A0A0G2JLM5 398 aa11.19□□□□□ -0.62
CLN6-215ENST00000636674 AJUBAQ96IF1 538 aa11.19□□□□□ -0.62
CLN6-215ENST00000636674 SPOCK3Q9BQ16 436 aa11.19□□□□□ -0.62
CLN6-215ENST00000636674 IGHV4-4A0A075B6R2 117 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 ATP6V0E1O15342 81 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 CLEC3BP05452 202 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 UBE2E1P51965 193 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 COTL1Q14019 142 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 RNF182Q8N6D2 247 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 C18orf15Q96N68 181 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 AGPAT4-IT1Q9H0P7 198 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 C11orf21Q9P2W6 132 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 DCHS2Q6V1P9 2916 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 IGHV3OR16-8A0A075B7F1 116 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 TRAV8-2A0A0B4J237 113 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 IGHV7-4-1A0A0J9YVY3 117 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 H3BUT2 72 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 IGKCP01834 107 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 ECSCRQ19T08 205 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 WFDC3Q8IUB2 231 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 ATP6V0BQ99437 205 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 U3KQE9 123 aa11.18□□□□□ -0.62
CLN6-215ENST00000636674 UBR5O95071 2799 aaPredicted RBP11.18□□□□□ -0.62
CLN6-215ENST00000636674 IGHV3-35A0A0C4DH35 117 aa11.17□□□□□ -0.62
CLN6-215ENST00000636674 C9orf47Q6ZRZ4 202 aa11.17□□□□□ -0.62
CLN6-215ENST00000636674 OR5A1Q8NGJ0 315 aa11.17□□□□□ -0.62
CLN6-215ENST00000636674 OR2K2Q8NGT1 345 aa11.17□□□□□ -0.62
CLN6-215ENST00000636674 TMEM158Q8WZ71 300 aa11.17□□□□□ -0.62
CLN6-215ENST00000636674 EEF1AKMT3Q96AZ1 226 aa11.17□□□□□ -0.62
CLN6-215ENST00000636674 VPS25Q9BRG1 176 aa11.17□□□□□ -0.62
CLN6-215ENST00000636674 IGKV2D-26A0A0A0MRZ7 120 aa11.16□□□□□ -0.62
CLN6-215ENST00000636674 TRBV7-1A0A0A6YYK4 115 aa11.16□□□□□ -0.62
CLN6-215ENST00000636674 A0A1W2PPM0 123 aa11.16□□□□□ -0.62
CLN6-215ENST00000636674 DPM2O94777 84 aa11.16□□□□□ -0.62
CLN6-215ENST00000636674 TMEM78Q5T7P6 136 aa11.16□□□□□ -0.62
CLN6-215ENST00000636674 SMIM15Q7Z3B0 74 aa11.16□□□□□ -0.62
CLN6-215ENST00000636674 NRACQ8N912 160 aa11.16□□□□□ -0.62
CLN6-215ENST00000636674 TENM4Q6N022 2769 aa11.16□□□□□ -0.62
CLN6-215ENST00000636674 TCTAP57738 103 aa11.16□□□□□ -0.62
CLN6-215ENST00000636674 METTL26Q96S19 204 aa11.16□□□□□ -0.62
CLN6-215ENST00000636674 TRGV3P03979 118 aa11.15□□□□□ -0.62
CLN6-215ENST00000636674 PRSS1P07477 247 aa11.15□□□□□ -0.62
CLN6-215ENST00000636674 GATA1P15976 413 aaPredicted RBP11.15□□□□□ -0.62
CLN6-215ENST00000636674 CLEC19AQ6UXS0 136 aa11.15□□□□□ -0.62
CLN6-215ENST00000636674 C8orf86Q6ZUL3 223 aa11.15□□□□□ -0.62
CLN6-215ENST00000636674 HRNRQ86YZ3 2850 aaPredicted RBP11.15□□□□□ -0.63
CLN6-215ENST00000636674 PPIFP30405 207 aaKnown RBP11.14□□□□□ -0.63
CLN6-215ENST00000636674 FOXC2Q99958 501 aa11.14□□□□□ -0.63
CLN6-215ENST00000636674 CHAC1Q9BUX1 264 aa11.14□□□□□ -0.63
CLN6-215ENST00000636674 LENEPQ9Y5L5 61 aa11.14□□□□□ -0.63
CLN6-215ENST00000636674 LRBAP50851 2863 aa11.14□□□□□ -0.63
CLN6-215ENST00000636674 SMIM17P0DL12 118 aa11.14□□□□□ -0.63
CLN6-215ENST00000636674 SRSF1Q07955 248 aaKnown RBP eCLIP11.14□□□□□ -0.63
CLN6-215ENST00000636674 LAGE3Q14657 143 aa11.14□□□□□ -0.63
CLN6-215ENST00000636674 HIVEP3Q5T1R4 2406 aa11.13□□□□□ -0.63
CLN6-215ENST00000636674 SAA4P35542 130 aa11.13□□□□□ -0.63
CLN6-215ENST00000636674 NEGR1Q7Z3B1 354 aa11.13□□□□□ -0.63
CLN6-215ENST00000636674 FLNCQ14315 2725 aa11.13□□□□□ -0.63
CLN6-215ENST00000636674 IGHV3-66A0A0C4DH42 116 aa11.13□□□□□ -0.63
CLN6-215ENST00000636674 CENPVL3A0A0U1RRI6 287 aa11.13□□□□□ -0.63
CLN6-215ENST00000636674 SMIM13P0DJ93 91 aa11.13□□□□□ -0.63
CLN6-215ENST00000636674 ZC2HC1BQ5TFG8 222 aa11.13□□□□□ -0.63
CLN6-215ENST00000636674 MRAP2Q96G30 205 aa11.13□□□□□ -0.63
CLN6-215ENST00000636674 TM2D2Q9BX73 214 aa11.13□□□□□ -0.63
CLN6-215ENST00000636674 SPCS1Q9Y6A9 102 aa11.13□□□□□ -0.63
CLN6-215ENST00000636674 TRBV25-1A0A075B6N4 114 aa11.12□□□□□ -0.63
CLN6-215ENST00000636674 G3V318 75 aa11.12□□□□□ -0.63
CLN6-215ENST00000636674 FXYD2P54710 66 aa11.12□□□□□ -0.63
CLN6-215ENST00000636674 C9orf139Q6ZV77 190 aa11.12□□□□□ -0.63
CLN6-215ENST00000636674 FABP2P12104 132 aa11.11□□□□□ -0.63
CLN6-215ENST00000636674 CRIP2P52943 208 aaPredicted RBP11.11□□□□□ -0.63
CLN6-215ENST00000636674 C19orf54Q5BKX5 351 aa11.11□□□□□ -0.63
CLN6-215ENST00000636674 C5orf56Q8N8D9 126 aa11.11□□□□□ -0.63
CLN6-215ENST00000636674 MYOZ3Q8TDC0 251 aa11.11□□□□□ -0.63
CLN6-215ENST00000636674 PHLDA1Q8WV24 401 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms