RNA–Protein interactions for RNA: ENST00000635893.1

SCN1A-211, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 168 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-211ENST00000635893 TMEM14BQ9NUH8 114 aa-1.59□□□□□ -2.66
SCN1A-211ENST00000635893 CSMD1Q96PZ7 3565 aa-1.59□□□□□ -2.66
SCN1A-211ENST00000635893 TRRAPQ9Y4A5 3859 aa-1.6□□□□□ -2.66
SCN1A-211ENST00000635893 DNAJC13O75165 2243 aa-1.6□□□□□ -2.67
SCN1A-211ENST00000635893 GYPBP06028 91 aa-1.6□□□□□ -2.67
SCN1A-211ENST00000635893 ATP5G3P48201 142 aa-1.6□□□□□ -2.67
SCN1A-211ENST00000635893 VMA21Q3ZAQ7 101 aa-1.6□□□□□ -2.67
SCN1A-211ENST00000635893 LINC00269Q8N2A0 174 aa-1.6□□□□□ -2.67
SCN1A-211ENST00000635893 DDI1Q8WTU0 396 aa-1.6□□□□□ -2.67
SCN1A-211ENST00000635893 CACYBPQ9HB71 228 aaKnown RBP-1.6□□□□□ -2.67
SCN1A-211ENST00000635893 MRPL35Q9NZE8 188 aaKnown RBP-1.6□□□□□ -2.67
SCN1A-211ENST00000635893 FRYQ5TBA9 3013 aa-1.6□□□□□ -2.67
SCN1A-211ENST00000635893 ACACBO00763 2458 aa-1.6□□□□□ -2.67
SCN1A-211ENST00000635893 DNAH8Q96JB1 4490 aa-1.6□□□□□ -2.67
SCN1A-211ENST00000635893 DNAH17Q9UFH2 4485 aa-1.61□□□□□ -2.67
SCN1A-211ENST00000635893 A0A087WTM6 91 aa-1.61□□□□□ -2.67
SCN1A-211ENST00000635893 K7ERJ3 54 aa-1.61□□□□□ -2.67
SCN1A-211ENST00000635893 PDE6DO43924 150 aa-1.61□□□□□ -2.67
SCN1A-211ENST00000635893 GGCTO75223 188 aaKnown RBP-1.61□□□□□ -2.67
SCN1A-211ENST00000635893 IFNA16P05015 189 aa-1.61□□□□□ -2.67
SCN1A-211ENST00000635893 CRHP06850 196 aa-1.61□□□□□ -2.67
SCN1A-211ENST00000635893 MT1HL1P0DM35 61 aa-1.61□□□□□ -2.67
SCN1A-211ENST00000635893 GRPEL2Q8TAA5 225 aa-1.61□□□□□ -2.67
SCN1A-211ENST00000635893 ASB4Q9Y574 426 aa-1.61□□□□□ -2.67
SCN1A-211ENST00000635893 BICRAQ9NZM4 1560 aa-1.61□□□□□ -2.67
SCN1A-211ENST00000635893 MYH9P35579 1960 aaKnown RBP-1.61□□□□□ -2.67
SCN1A-211ENST00000635893 TANC2Q9HCD6 1990 aa-1.61□□□□□ -2.67
SCN1A-211ENST00000635893 C5orf42Q9H799 3197 aa-1.61□□□□□ -2.67
SCN1A-211ENST00000635893 ARHGAP31Q2M1Z3 1444 aa-1.62□□□□□ -2.67
SCN1A-211ENST00000635893 TRBV19A0A075B6N1 114 aa-1.62□□□□□ -2.67
SCN1A-211ENST00000635893 PHBP35232 272 aa-1.62□□□□□ -2.67
SCN1A-211ENST00000635893 OMPP47874 163 aa-1.62□□□□□ -2.67
SCN1A-211ENST00000635893 KLKP1Q107X0 134 aa-1.62□□□□□ -2.67
SCN1A-211ENST00000635893 EDDM3AQ14507 147 aa-1.62□□□□□ -2.67
SCN1A-211ENST00000635893 CCDC122Q5T0U0 273 aa-1.62□□□□□ -2.67
SCN1A-211ENST00000635893 GOLT1AQ6ZVE7 132 aa-1.62□□□□□ -2.67
SCN1A-211ENST00000635893 CYP4F30PQ9H0H9 118 aa-1.62□□□□□ -2.67
SCN1A-211ENST00000635893 PRELID3BQ9Y3B1 194 aa-1.62□□□□□ -2.67
SCN1A-211ENST00000635893 REV3LO60673 3130 aa-1.62□□□□□ -2.67
SCN1A-211ENST00000635893 PIK3C2GO75747 1445 aa-1.63□□□□□ -2.67
SCN1A-211ENST00000635893 RER1O15258 196 aa-1.63□□□□□ -2.67
SCN1A-211ENST00000635893 IFNA5P01569 189 aa-1.63□□□□□ -2.67
SCN1A-211ENST00000635893 NMBP08949 121 aa-1.63□□□□□ -2.67
SCN1A-211ENST00000635893 CXCL1P09341 107 aa-1.63□□□□□ -2.67
SCN1A-211ENST00000635893 ERP29P30040 261 aaKnown RBP-1.63□□□□□ -2.67
SCN1A-211ENST00000635893 ARPP19P56211 112 aa-1.63□□□□□ -2.67
SCN1A-211ENST00000635893 HACD4Q5VWC8 232 aa-1.63□□□□□ -2.67
SCN1A-211ENST00000635893 ENY2Q9NPA8 101 aa-1.63□□□□□ -2.67
SCN1A-211ENST00000635893 BCL9LQ86UU0 1499 aa-1.63□□□□□ -2.67
SCN1A-211ENST00000635893 LYRM1O43325 122 aa-1.64□□□□□ -2.67
SCN1A-211ENST00000635893 C1QBP02746 253 aa-1.64□□□□□ -2.67
SCN1A-211ENST00000635893 TCRBP04435 133 aa-1.64□□□□□ -2.67
SCN1A-211ENST00000635893 TMBIM6P55061 237 aa-1.64□□□□□ -2.67
SCN1A-211ENST00000635893 Q5XG85 94 aa-1.64□□□□□ -2.67
SCN1A-211ENST00000635893 OTUD6BQ8N6M0 293 aa-1.64□□□□□ -2.67
SCN1A-211ENST00000635893 CCL4L1Q8NHW4 92 aa-1.64□□□□□ -2.67
SCN1A-211ENST00000635893 ATP6V1G3Q96LB4 118 aa-1.64□□□□□ -2.67
SCN1A-211ENST00000635893 ATG2AQ2TAZ0 1938 aa-1.65□□□□□ -2.67
SCN1A-211ENST00000635893 H7BYZ3 331 aa-1.65□□□□□ -2.67
SCN1A-211ENST00000635893 NFYBP25208 207 aa-1.65□□□□□ -2.67
SCN1A-211ENST00000635893 MYL6P60660 151 aa-1.65□□□□□ -2.67
SCN1A-211ENST00000635893 DEFB112Q30KQ8 113 aa-1.65□□□□□ -2.67
SCN1A-211ENST00000635893 SREK1IP1Q8N9Q2 155 aaPredicted RBP-1.65□□□□□ -2.67
SCN1A-211ENST00000635893 AP1S3Q96PC3 154 aa-1.65□□□□□ -2.67
SCN1A-211ENST00000635893 BIN3Q9NQY0 253 aa-1.65□□□□□ -2.67
SCN1A-211ENST00000635893 MRPL36Q9P0J6 103 aaKnown RBP-1.65□□□□□ -2.67
SCN1A-211ENST00000635893 MYO9AB2RTY4 2548 aa-1.65□□□□□ -2.67
SCN1A-211ENST00000635893 ZFHX3Q15911 3703 aa-1.65□□□□□ -2.67
SCN1A-211ENST00000635893 SPENQ96T58 3664 aaKnown RBP-1.65□□□□□ -2.67
SCN1A-211ENST00000635893 KIF1BO60333 1816 aa-1.66□□□□□ -2.67
SCN1A-211ENST00000635893 AFDNP55196 1824 aaKnown RBP-1.66□□□□□ -2.67
SCN1A-211ENST00000635893 TRPM7Q96QT4 1865 aa-1.66□□□□□ -2.68
SCN1A-211ENST00000635893 HIGD1CA8MV81 97 aa-1.66□□□□□ -2.68
SCN1A-211ENST00000635893 MT1XP80297 61 aa-1.66□□□□□ -2.68
SCN1A-211ENST00000635893 SNCBQ16143 134 aa-1.66□□□□□ -2.68
SCN1A-211ENST00000635893 ISOC1Q96CN7 298 aa-1.66□□□□□ -2.68
SCN1A-211ENST00000635893 TRIM4Q9C037 500 aa-1.66□□□□□ -2.68
SCN1A-211ENST00000635893 PARVBQ9HBI1 364 aa-1.66□□□□□ -2.68
SCN1A-211ENST00000635893 TLN1Q9Y490 2541 aaKnown RBP-1.66□□□□□ -2.68
SCN1A-211ENST00000635893 FRMPD1Q5SYB0 1578 aa-1.67□□□□□ -2.68
SCN1A-211ENST00000635893 INSL3P51460 131 aa-1.67□□□□□ -2.68
SCN1A-211ENST00000635893 H3F3AP84243 136 aa-1.67□□□□□ -2.68
SCN1A-211ENST00000635893 DSCR8Q96T75 97 aa-1.67□□□□□ -2.68
SCN1A-211ENST00000635893 MAP1LC3BQ9GZQ8 125 aa-1.67□□□□□ -2.68
SCN1A-211ENST00000635893 TRIOO75962 3097 aa-1.68□□□□□ -2.68
SCN1A-211ENST00000635893 DOCK11Q5JSL3 2073 aa-1.68□□□□□ -2.68
SCN1A-211ENST00000635893 DMXL2Q8TDJ6 3036 aa-1.68□□□□□ -2.68
SCN1A-211ENST00000635893 MAP3K5Q99683 1374 aa-1.68□□□□□ -2.68
SCN1A-211ENST00000635893 F2Z2F3 143 aa-1.68□□□□□ -2.68
SCN1A-211ENST00000635893 H0YAA0 97 aa-1.68□□□□□ -2.68
SCN1A-211ENST00000635893 IFNA4P05014 189 aa-1.68□□□□□ -2.68
SCN1A-211ENST00000635893 FAM216BQ8N7L0 139 aa-1.68□□□□□ -2.68
SCN1A-211ENST00000635893 GNPDA2Q8TDQ7 276 aa-1.68□□□□□ -2.68
SCN1A-211ENST00000635893 CNFNQ9BYD5 112 aa-1.68□□□□□ -2.68
SCN1A-211ENST00000635893 COMMD3Q9UBI1 195 aa-1.68□□□□□ -2.68
SCN1A-211ENST00000635893 PRO0255Q9UI72 69 aa-1.68□□□□□ -2.68
SCN1A-211ENST00000635893 FAM186AA6NE01 2351 aa-1.68□□□□□ -2.68
SCN1A-211ENST00000635893 LRBAP50851 2863 aa-1.69□□□□□ -2.68
SCN1A-211ENST00000635893 CPDO75976 1380 aa-1.69□□□□□ -2.68
SCN1A-211ENST00000635893 CEP290O15078 2479 aa-1.69□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms