RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 H3BRN7 92 aa9.31□□□□□ -0.92
COL11A1-211ENST00000635193 GATA4P43694 442 aa9.31□□□□□ -0.92
COL11A1-211ENST00000635193 POU2AF1Q16633 256 aa9.31□□□□□ -0.92
COL11A1-211ENST00000635193 RNF166Q96A37 237 aaPredicted RBP9.31□□□□□ -0.92
COL11A1-211ENST00000635193 NLRC5Q86WI3 1866 aa9.31□□□□□ -0.92
COL11A1-211ENST00000635193 THADAQ6YHU6 1953 aa9.31□□□□□ -0.92
COL11A1-211ENST00000635193 SDHAF1A6NFY7 115 aa9.31□□□□□ -0.92
COL11A1-211ENST00000635193 H3BUX3 64 aa9.31□□□□□ -0.92
COL11A1-211ENST00000635193 ACYP1P07311 99 aa9.31□□□□□ -0.92
COL11A1-211ENST00000635193 FNDC1Q4ZHG4 1894 aaPredicted RBP9.3□□□□□ -0.92
COL11A1-211ENST00000635193 ABCA1O95477 2261 aa9.3□□□□□ -0.92
COL11A1-211ENST00000635193 DUX4L9Q6RFH8 374 aaPredicted RBP9.3□□□□□ -0.92
COL11A1-211ENST00000635193 RS1O15537 224 aa9.3□□□□□ -0.92
COL11A1-211ENST00000635193 ANKRD39Q53RE8 183 aa9.3□□□□□ -0.92
COL11A1-211ENST00000635193 LINC01545Q5VT33 79 aa9.3□□□□□ -0.92
COL11A1-211ENST00000635193 BRD3OSQ6XYD6 125 aa9.3□□□□□ -0.92
COL11A1-211ENST00000635193 Q8TCH9 128 aa9.3□□□□□ -0.92
COL11A1-211ENST00000635193 COL4A6Q14031 1691 aa9.3□□□□□ -0.92
COL11A1-211ENST00000635193 I3L3M4 83 aa9.3□□□□□ -0.92
COL11A1-211ENST00000635193 TEN1Q86WV5 123 aa9.3□□□□□ -0.92
COL11A1-211ENST00000635193 MGAMO43451 1857 aa9.3□□□□□ -0.92
COL11A1-211ENST00000635193 C3orf36Q3SXR2 165 aa9.3□□□□□ -0.92
COL11A1-211ENST00000635193 THAP8Q8NA92 274 aa9.3□□□□□ -0.92
COL11A1-211ENST00000635193 PLXND1Q9Y4D7 1925 aa9.29□□□□□ -0.92
COL11A1-211ENST00000635193 PLXNA2O75051 1894 aa9.29□□□□□ -0.92
COL11A1-211ENST00000635193 PI4KAP42356 2102 aa9.29□□□□□ -0.92
COL11A1-211ENST00000635193 LTAP01374 205 aa9.29□□□□□ -0.92
COL11A1-211ENST00000635193 IGHV3-53P01767 116 aa9.29□□□□□ -0.92
COL11A1-211ENST00000635193 SPTBN1Q01082 2364 aaKnown RBP9.29□□□□□ -0.92
COL11A1-211ENST00000635193 COL6A6A6NMZ7 2263 aa9.29□□□□□ -0.92
COL11A1-211ENST00000635193 DAZ1Q9NQZ3 744 aaKnown RBP9.29□□□□□ -0.92
COL11A1-211ENST00000635193 FAM110DQ8TAY7 271 aaPredicted RBP9.29□□□□□ -0.92
COL11A1-211ENST00000635193 TRAV12-1A0A0B4J245 112 aa9.29□□□□□ -0.92
COL11A1-211ENST00000635193 F8WEM9 126 aa9.29□□□□□ -0.92
COL11A1-211ENST00000635193 DKK1O94907 266 aa9.29□□□□□ -0.92
COL11A1-211ENST00000635193 LINC00173Q6ZV60 143 aa9.29□□□□□ -0.92
COL11A1-211ENST00000635193 TPSG1Q9NRR2 321 aa9.29□□□□□ -0.92
COL11A1-211ENST00000635193 OVOL3O00110 214 aa9.28□□□□□ -0.92
COL11A1-211ENST00000635193 HELZP42694 1942 aaKnown RBP9.28□□□□□ -0.92
COL11A1-211ENST00000635193 Q8NFD4 153 aa9.28□□□□□ -0.92
COL11A1-211ENST00000635193 LY6HO94772 140 aa9.28□□□□□ -0.92
COL11A1-211ENST00000635193 FOXI1Q12951 378 aa9.28□□□□□ -0.92
COL11A1-211ENST00000635193 FAM120AOSQ5T036 256 aa9.28□□□□□ -0.92
COL11A1-211ENST00000635193 DTX1Q86Y01 620 aa9.28□□□□□ -0.92
COL11A1-211ENST00000635193 TINCRA0A1B0GVN0 87 aa9.28□□□□□ -0.92
COL11A1-211ENST00000635193 THSD7BQ9C0I4 1608 aa9.28□□□□□ -0.92
COL11A1-211ENST00000635193 E7EQL1 145 aa9.27□□□□□ -0.92
COL11A1-211ENST00000635193 ATP6V0E1O15342 81 aa9.27□□□□□ -0.92
COL11A1-211ENST00000635193 SAA4P35542 130 aa9.27□□□□□ -0.92
COL11A1-211ENST00000635193 C11orf44Q8N8P7 122 aa9.27□□□□□ -0.92
COL11A1-211ENST00000635193 LINC00311Q8N616 119 aa9.27□□□□□ -0.93
COL11A1-211ENST00000635193 C20orf78Q9BR46 151 aa9.27□□□□□ -0.93
COL11A1-211ENST00000635193 K7EM74 188 aa9.27□□□□□ -0.93
COL11A1-211ENST00000635193 FXYD2P54710 66 aa9.27□□□□□ -0.93
COL11A1-211ENST00000635193 TRAV13-2A0A0B4J235 113 aa9.27□□□□□ -0.93
COL11A1-211ENST00000635193 FAM236AA0A1B0GUQ0 79 aa9.27□□□□□ -0.93
COL11A1-211ENST00000635193 FAM236BA0A1B0GV22 79 aa9.27□□□□□ -0.93
COL11A1-211ENST00000635193 PIP4P2Q8N4L2 257 aa9.26□□□□□ -0.93
COL11A1-211ENST00000635193 CRLF1O75462 422 aa9.26□□□□□ -0.93
COL11A1-211ENST00000635193 PFN2P35080 140 aa9.26□□□□□ -0.93
COL11A1-211ENST00000635193 SS18Q15532 418 aa9.26□□□□□ -0.93
COL11A1-211ENST00000635193 TCTEX1D4Q5JR98 221 aa9.26□□□□□ -0.93
COL11A1-211ENST00000635193 YLPM1P49750 1951 aaKnown RBP9.26□□□□□ -0.93
COL11A1-211ENST00000635193 CHD3Q12873 2000 aaKnown RBP9.26□□□□□ -0.93
COL11A1-211ENST00000635193 ATOX1O00244 68 aa9.26□□□□□ -0.93
COL11A1-211ENST00000635193 ZNF493Q6ZR52 646 aa9.26□□□□□ -0.93
COL11A1-211ENST00000635193 CMC4P56277 68 aaPredicted RBP9.26□□□□□ -0.93
COL11A1-211ENST00000635193 SHISA9B4DS77 424 aa9.25□□□□□ -0.93
COL11A1-211ENST00000635193 NDUFC2O95298 119 aa9.25□□□□□ -0.93
COL11A1-211ENST00000635193 LOXP28300 417 aaPredicted RBP9.25□□□□□ -0.93
COL11A1-211ENST00000635193 Q6ZS92 163 aa9.25□□□□□ -0.93
COL11A1-211ENST00000635193 BAALC-AS2P0C853 105 aa9.25□□□□□ -0.93
COL11A1-211ENST00000635193 RPL32P62910 135 aaKnown RBP9.25□□□□□ -0.93
COL11A1-211ENST00000635193 CR1LQ2VPA4 569 aa9.25□□□□□ -0.93
COL11A1-211ENST00000635193 SSC4DQ8WTU2 575 aa9.25□□□□□ -0.93
COL11A1-211ENST00000635193 TEX36Q5VZQ5 186 aa9.25□□□□□ -0.93
COL11A1-211ENST00000635193 RHODO00212 210 aa9.25□□□□□ -0.93
COL11A1-211ENST00000635193 LYPD6Q86Y78 171 aa9.25□□□□□ -0.93
COL11A1-211ENST00000635193 TMEM243Q9BU79 118 aa9.25□□□□□ -0.93
COL11A1-211ENST00000635193 POLEQ07864 2286 aa9.25□□□□□ -0.93
COL11A1-211ENST00000635193 HIGD1BQ9P298 99 aa9.25□□□□□ -0.93
COL11A1-211ENST00000635193 KNCNA6PVL3 124 aa9.24□□□□□ -0.93
COL11A1-211ENST00000635193 CDK2AP2O75956 126 aa9.24□□□□□ -0.93
COL11A1-211ENST00000635193 DIAPH2-AS1Q14236 149 aa9.24□□□□□ -0.93
COL11A1-211ENST00000635193 SUMO4Q6EEV6 95 aa9.24□□□□□ -0.93
COL11A1-211ENST00000635193 UBE2E2Q96LR5 201 aa9.24□□□□□ -0.93
COL11A1-211ENST00000635193 DSCR8Q96T75 97 aa9.24□□□□□ -0.93
COL11A1-211ENST00000635193 MSRB2Q9Y3D2 182 aa9.24□□□□□ -0.93
COL11A1-211ENST00000635193 DOPEY2Q9Y3R5 2298 aa9.24□□□□□ -0.93
COL11A1-211ENST00000635193 ROS1P08922 2347 aa9.24□□□□□ -0.93
COL11A1-211ENST00000635193 PRSS47A8MTI9 375 aa9.24□□□□□ -0.93
COL11A1-211ENST00000635193 DSCR9P59020 149 aa9.23□□□□□ -0.93
COL11A1-211ENST00000635193 MYO7BQ6PIF6 2116 aa9.23□□□□□ -0.93
COL11A1-211ENST00000635193 DOCK10Q96BY6 2186 aa9.23□□□□□ -0.93
COL11A1-211ENST00000635193 G3V318 75 aa9.23□□□□□ -0.93
COL11A1-211ENST00000635193 K7EMI3 77 aa9.23□□□□□ -0.93
COL11A1-211ENST00000635193 MRPL23Q16540 153 aaKnown RBP9.23□□□□□ -0.93
COL11A1-211ENST00000635193 A0A1B0GX51 115 aa9.23□□□□□ -0.93
COL11A1-211ENST00000635193 SPINK13Q1W4C9 94 aa9.23□□□□□ -0.93
COL11A1-211ENST00000635193 C17orf77Q96MU5 243 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms