RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 C20orf202A1L168 122 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 TCAPO15273 167 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 LINC00614P0C842 121 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 EMP1P54849 157 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 C16orf54Q6UWD8 224 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 TTC9CQ8N5M4 171 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 C14orf178Q8N769 122 aaPredicted RBP5.81□□□□□ -1.48
PKP4-217ENST00000628904 WFDC11Q8NEX6 87 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 PRR25Q96S07 402 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 PYGO2Q9BRQ0 406 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 OR4C46A6NHA9 309 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 A6NJY4 79 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 FABP5P3A8MUU1 101 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 EREGO14944 169 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 ZNF25P17030 456 aaPredicted RBP5.81□□□□□ -1.48
PKP4-217ENST00000628904 C8orf31Q8N9H6 132 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 NPBQ8NG41 125 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 FAM110DQ8TAY7 271 aaPredicted RBP5.81□□□□□ -1.48
PKP4-217ENST00000628904 AGPAT4-IT1Q9H0P7 198 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 KLK9Q9UKQ9 250 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 TP53TG3Q9ULZ0 132 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 MXRA5Q9NR99 2828 aa5.81□□□□□ -1.48
PKP4-217ENST00000628904 KNCNA6PVL3 124 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 NDUFA3O95167 84 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 CD7P09564 240 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 SMIM17P0DL12 118 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 BMI1P35226 326 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 SCGB2A2Q13296 93 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 RNF151Q2KHN1 245 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 ZNF843Q8N446 348 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 OR10AG1Q8NH19 301 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 DYNLRB2Q8TF09 96 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 MAP1LC3CQ9BXW4 147 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 SMIM27A0A1W2PRY6 76 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 C7orf71A4D174 169 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 RAB9AP51151 201 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 SPINK13Q1W4C9 94 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 SAPCD1Q5SSQ6 148 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 AJUBAQ96IF1 538 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 GNRH2O43555 120 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 GAS8-AS1O95177 125 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 CRIP1P50238 77 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 REC114Q7Z4M0 266 aa5.8□□□□□ -1.48
PKP4-217ENST00000628904 BUB3O43684 328 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 LTAP01374 205 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 YPEL3P61236 119 aaPredicted RBP5.79□□□□□ -1.48
PKP4-217ENST00000628904 C18orf65Q6ZTR6 163 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 ZNF502Q8TBZ5 544 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 ZNF256Q9Y2P7 627 aaPredicted RBP5.79□□□□□ -1.48
PKP4-217ENST00000628904 UNC79Q9P2D8 2635 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 TYMSP04818 313 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 S100A7P31151 101 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 LOXL1Q08397 574 aaPredicted RBP5.79□□□□□ -1.48
PKP4-217ENST00000628904 STPG4Q8N801 248 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 LINC01356Q8N9X3 169 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 ALKBH7Q9BT30 221 aaPredicted RBP5.79□□□□□ -1.48
PKP4-217ENST00000628904 ZFP30Q9Y2G7 519 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 CBY1Q9Y3M2 126 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 IGLC2P0DOY2 106 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 NSUN5P1Q3KNT7 163 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 RAB37Q96AX2 223 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 SMR3AQ99954 134 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 SMAD5-AS1Q9Y6J3 95 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 NBPF19A0A087WUL8 3843 aa5.79□□□□□ -1.48
PKP4-217ENST00000628904 M0R143 59 aa5.78□□□□□ -1.48
PKP4-217ENST00000628904 CACNG7P62955 275 aa5.78□□□□□ -1.48
PKP4-217ENST00000628904 UBE2E2Q96LR5 201 aa5.78□□□□□ -1.48
PKP4-217ENST00000628904 TMEM70Q9BUB7 260 aa5.78□□□□□ -1.48
PKP4-217ENST00000628904 TMEM160Q9NX00 188 aa5.78□□□□□ -1.48
PKP4-217ENST00000628904 OOSP1A8MZH6 123 aa5.78□□□□□ -1.48
PKP4-217ENST00000628904 F8W735 103 aaPredicted RBP5.78□□□□□ -1.48
PKP4-217ENST00000628904 SLURP1P55000 103 aa5.78□□□□□ -1.48
PKP4-217ENST00000628904 EBLN2Q6P2I7 272 aa5.78□□□□□ -1.48
PKP4-217ENST00000628904 FAM159AQ6UWV7 190 aa5.78□□□□□ -1.48
PKP4-217ENST00000628904 NIPBLQ6KC79 2804 aaeCLIP5.78□□□□□ -1.485e-6■□□□□ 8.1
PKP4-217ENST00000628904 ORMDL3Q8N138 153 aa5.78□□□□□ -1.48
PKP4-217ENST00000628904 KLHL30-AS1Q8NEE0 82 aa5.78□□□□□ -1.48
PKP4-217ENST00000628904 MAST4O15021 2626 aa5.78□□□□□ -1.48
PKP4-217ENST00000628904 MGAM2Q2M2H8 2515 aa5.78□□□□□ -1.48
PKP4-217ENST00000628904 APCP25054 2843 aa5.78□□□□□ -1.48
PKP4-217ENST00000628904 TRBV9A0A0B4J1U6 114 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 A0A0G2JLM5 398 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 A8MWP6 167 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 LEPP41159 167 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 SFTA2Q6UW10 78 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 PEF1Q9UBV8 284 aaKnown RBP5.77□□□□□ -1.49
PKP4-217ENST00000628904 TRBV7-1A0A0A6YYK4 115 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 TRAV8-6A0A0B4J262 113 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 K7EMI3 77 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 NUDT3O95989 172 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 NPYP01303 97 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 SRSF1Q07955 248 aaKnown RBP eCLIP5.77□□□□□ -1.495e-8■■□□□ 12.1
PKP4-217ENST00000628904 VAMP3Q15836 100 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 ZNF56Q15929 161 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 JPT2Q9H910 190 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 OR11H1Q8NG94 326 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 TTTY13Q9BZ97 58 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 PRSS22Q9GZN4 317 aa5.77□□□□□ -1.49
PKP4-217ENST00000628904 FBLL1A6NHQ2 334 aaKnown RBP5.76□□□□□ -1.49
PKP4-217ENST00000628904 PCP4P48539 62 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms