RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 IGKV3D-20A0A0C4DH25 116 aa16.66■□□□□ 0.26
PNKP-220ENST00000627232 EDN2P20800 178 aa16.66■□□□□ 0.26
PNKP-220ENST00000627232 KRTAP1-1Q07627 177 aa16.66■□□□□ 0.26
PNKP-220ENST00000627232 FAM104BQ5XKR9 115 aa16.66■□□□□ 0.26
PNKP-220ENST00000627232 DCANP1Q8TF63 244 aa16.66■□□□□ 0.26
PNKP-220ENST00000627232 FAM19A4Q96LR4 140 aa16.66■□□□□ 0.26
PNKP-220ENST00000627232 FAM181BA6NEQ2 426 aa16.65■□□□□ 0.26
PNKP-220ENST00000627232 ZNF705DP0CH99 300 aaPredicted RBP16.65■□□□□ 0.26
PNKP-220ENST00000627232 ZNF705BP0CI00 300 aaPredicted RBP16.65■□□□□ 0.26
PNKP-220ENST00000627232 KLHDC1Q8N7A1 406 aa16.65■□□□□ 0.26
PNKP-220ENST00000627232 URB1-AS1Q96HZ7 61 aa16.65■□□□□ 0.26
PNKP-220ENST00000627232 C11orf21Q9P2W6 132 aa16.65■□□□□ 0.26
PNKP-220ENST00000627232 LINC00587B1AMM8 73 aa16.65■□□□□ 0.26
PNKP-220ENST00000627232 TSTD3H0UI37 97 aa16.65■□□□□ 0.26
PNKP-220ENST00000627232 HOXD3P31249 432 aaPredicted RBP16.65■□□□□ 0.26
PNKP-220ENST00000627232 FAM19A2Q8N3H0 131 aa16.65■□□□□ 0.26
PNKP-220ENST00000627232 ZFAND2AQ8N6M9 145 aa16.65■□□□□ 0.26
PNKP-220ENST00000627232 U3KQK5 164 aa16.65■□□□□ 0.26
PNKP-220ENST00000627232 NTF3P20783 257 aa16.64■□□□□ 0.25
PNKP-220ENST00000627232 SYNJ2BPP57105 145 aa16.64■□□□□ 0.25
PNKP-220ENST00000627232 TWIST1Q15672 202 aa16.64■□□□□ 0.25
PNKP-220ENST00000627232 APRG1Q8IVJ8 170 aa16.64■□□□□ 0.25
PNKP-220ENST00000627232 IGKV3-7A0A075B6H7 116 aa16.63■□□□□ 0.25
PNKP-220ENST00000627232 DNAJC9-AS1A6NH13 148 aa16.63■□□□□ 0.25
PNKP-220ENST00000627232 CENPEQ02224 2701 aa16.63■□□□□ 0.25
PNKP-220ENST00000627232 TMEM191AQ9H0A3 160 aa16.63■□□□□ 0.25
PNKP-220ENST00000627232 M0R2Z0 102 aa16.62■□□□□ 0.25
PNKP-220ENST00000627232 LINC00614P0C842 121 aa16.62■□□□□ 0.25
PNKP-220ENST00000627232 PRR9Q5T870 116 aa16.62■□□□□ 0.25
PNKP-220ENST00000627232 MS4A6AQ9H2W1 248 aa16.62■□□□□ 0.25
PNKP-220ENST00000627232 TRAV21A0A0B4J279 112 aa16.61■□□□□ 0.25
PNKP-220ENST00000627232 SRD5A1P18405 259 aa16.61■□□□□ 0.25
PNKP-220ENST00000627232 CSMD2Q7Z408 3487 aa16.61■□□□□ 0.25
PNKP-220ENST00000627232 MAP1AP78559 2803 aaPredicted RBP16.61■□□□□ 0.25
PNKP-220ENST00000627232 C2orf70A6NJV1 201 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 OR5AL1P0C617 328 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 CD33P20138 364 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 RAB4AP20338 218 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 KRTDAPP60985 99 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 Q6ZSV7 163 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 AMN1Q8IY45 258 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 ZNF664Q8N3J9 261 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 C4orf3Q8WVX3 66 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 YAE1D1Q9NRH1 226 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 RNF114Q9Y508 228 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 ZFHX3Q15911 3703 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 MUC21A0A0G2JKD1 596 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 MUC21A0A140T8X8 626 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 K7EQG2 157 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 M0QZ24 198 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 SNAI2O43623 268 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 MRPL51Q4U2R6 128 aaKnown RBP16.6■□□□□ 0.25
PNKP-220ENST00000627232 MUC21Q5SSG8 566 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 ORMDL3Q8N138 153 aa16.6■□□□□ 0.25
PNKP-220ENST00000627232 ZANQ9Y493 2812 aa16.59■□□□□ 0.25
PNKP-220ENST00000627232 F6UB75 175 aa16.59■□□□□ 0.25
PNKP-220ENST00000627232 LINC01619G3V211 115 aa16.59■□□□□ 0.25
PNKP-220ENST00000627232 DEFB1P60022 68 aa16.59■□□□□ 0.25
PNKP-220ENST00000627232 TEX43Q6ZNM6 134 aa16.59■□□□□ 0.25
PNKP-220ENST00000627232 WFDC12Q8WWY7 111 aa16.59■□□□□ 0.25
PNKP-220ENST00000627232 CHD6Q8TD26 2715 aa16.59■□□□□ 0.25
PNKP-220ENST00000627232 TENM4Q6N022 2769 aa16.58■□□□□ 0.25
PNKP-220ENST00000627232 IGHV4-4A0A075B6R2 117 aa16.58■□□□□ 0.24
PNKP-220ENST00000627232 C3orf79P0CE67 100 aa16.58■□□□□ 0.24
PNKP-220ENST00000627232 SSTP61278 116 aa16.58■□□□□ 0.24
PNKP-220ENST00000627232 CACNG7P62955 275 aa16.58■□□□□ 0.24
PNKP-220ENST00000627232 WFDC3Q8IUB2 231 aa16.58■□□□□ 0.24
PNKP-220ENST00000627232 PRO1933Q9H354 126 aa16.58■□□□□ 0.24
PNKP-220ENST00000627232 D6R8Y8 96 aa16.57■□□□□ 0.24
PNKP-220ENST00000627232 SNRPD3P62318 126 aaKnown RBP16.57■□□□□ 0.24
PNKP-220ENST00000627232 SCGB2A2Q13296 93 aa16.57■□□□□ 0.24
PNKP-220ENST00000627232 Q8N976 141 aa16.57■□□□□ 0.24
PNKP-220ENST00000627232 PRELID3AQ96N28 172 aa16.57■□□□□ 0.24
PNKP-220ENST00000627232 ODF3Q96PU9 254 aa16.57■□□□□ 0.24
PNKP-220ENST00000627232 SELENOKQ9Y6D0 94 aa16.57■□□□□ 0.24
PNKP-220ENST00000627232 TCTEX1D4Q5JR98 221 aa16.56■□□□□ 0.24
PNKP-220ENST00000627232 C18orf65Q6ZTR6 163 aa16.56■□□□□ 0.24
PNKP-220ENST00000627232 MSRB1Q9NZV6 116 aa16.56■□□□□ 0.24
PNKP-220ENST00000627232 IGHV1-24A0A0C4DH33 117 aa16.55■□□□□ 0.24
PNKP-220ENST00000627232 PPBPP02775 128 aa16.55■□□□□ 0.24
PNKP-220ENST00000627232 RNF185Q96GF1 192 aa16.55■□□□□ 0.24
PNKP-220ENST00000627232 ITPR3Q14573 2671 aa16.55■□□□□ 0.24
PNKP-220ENST00000627232 TEX15Q9BXT5 2789 aa16.55■□□□□ 0.24
PNKP-220ENST00000627232 KLLNB2CW77 178 aa16.55■□□□□ 0.24
PNKP-220ENST00000627232 MED14OSP0DP75 135 aa16.55■□□□□ 0.24
PNKP-220ENST00000627232 RNASE4P34096 147 aaKnown RBP16.55■□□□□ 0.24
PNKP-220ENST00000627232 SLURP1P55000 103 aa16.55■□□□□ 0.24
PNKP-220ENST00000627232 Q6ZQT7 251 aa16.55■□□□□ 0.24
PNKP-220ENST00000627232 OR1N2Q8NGR9 330 aa16.55■□□□□ 0.24
PNKP-220ENST00000627232 DPF1Q92782 380 aa16.55■□□□□ 0.24
PNKP-220ENST00000627232 ESM1Q9NQ30 184 aa16.55■□□□□ 0.24
PNKP-220ENST00000627232 PEMTQ9UBM1 199 aa16.55■□□□□ 0.24
PNKP-220ENST00000627232 J3KRW8 73 aa16.54■□□□□ 0.24
PNKP-220ENST00000627232 CSN3P07498 182 aa16.54■□□□□ 0.24
PNKP-220ENST00000627232 DDTP30046 118 aa16.54■□□□□ 0.24
PNKP-220ENST00000627232 CKS2P33552 79 aa16.54■□□□□ 0.24
PNKP-220ENST00000627232 PRSS3P2Q8NHM4 247 aa16.54■□□□□ 0.24
PNKP-220ENST00000627232 TMEM160Q9NX00 188 aa16.54■□□□□ 0.24
PNKP-220ENST00000627232 LAMTOR2Q9Y2Q5 125 aa16.54■□□□□ 0.24
PNKP-220ENST00000627232 KIR2DL5BA0A0G2JN68 375 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms