RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	SRSF8	Q9BRL6	282 aa	Known RBP	11.24	□□□□□ -0.61
SMTN-223	ENST00000619644	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.24	□□□□□ -0.61
SMTN-223	ENST00000619644	HIGD1B	Q9P298	99 aa		11.24	□□□□□ -0.61
SMTN-223	ENST00000619644	CHD8	Q9HCK8	2581 aa		11.24	□□□□□ -0.61
SMTN-223	ENST00000619644	PRAC2	D3DTV9	90 aa		11.24	□□□□□ -0.61
SMTN-223	ENST00000619644	SCGB2A1	O75556	95 aa		11.24	□□□□□ -0.61
SMTN-223	ENST00000619644	CTSG	P08311	255 aa		11.24	□□□□□ -0.61
SMTN-223	ENST00000619644	UFC1	Q9Y3C8	167 aa		11.24	□□□□□ -0.61
SMTN-223	ENST00000619644	SPG11	Q96JI7	2443 aa		11.23	□□□□□ -0.61
SMTN-223	ENST00000619644		F8W735	103 aa	Predicted RBP	11.23	□□□□□ -0.61
SMTN-223	ENST00000619644	OR11H6	Q8NGC7	330 aa		11.23	□□□□□ -0.61
SMTN-223	ENST00000619644	ATP6V0B	Q99437	205 aa		11.23	□□□□□ -0.61
SMTN-223	ENST00000619644	PRTN3	P24158	256 aa		11.23	□□□□□ -0.61
SMTN-223	ENST00000619644		Q5PR19	223 aa		11.23	□□□□□ -0.61
SMTN-223	ENST00000619644	CLEC19A	Q6UXS0	136 aa		11.23	□□□□□ -0.61
SMTN-223	ENST00000619644	CELSR1	Q9NYQ6	3014 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644	NDUFA3	O95167	84 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644	LEP	P41159	167 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644	NPB	Q8NG41	125 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644	LINC00527	Q9UJ94	153 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644	SPTBN4	Q9H254	2564 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644	CCDC144NL	Q6NUI1	221 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644	IL17REL	Q6ZVW7	336 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644	SMAD5-AS1	Q9Y6J3	95 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644	TRBV25-1	A0A075B6N4	114 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644	ODF1	Q14990	250 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644	FOXI2	Q6ZQN5	318 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644	LY6G5B	Q8NDX9	201 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644	PIFO	Q8TCI5	191 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644	MAP1LC3A	Q9H492	121 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644	HHLA3	Q9XRX5	114 aa		11.22	□□□□□ -0.61
SMTN-223	ENST00000619644		G3V318	75 aa		11.21	□□□□□ -0.61
SMTN-223	ENST00000619644		J3QR89	54 aa		11.21	□□□□□ -0.61
SMTN-223	ENST00000619644	SH2D6	Q7Z4S9	175 aa		11.21	□□□□□ -0.61
SMTN-223	ENST00000619644	IGHV3OR16-10	A0A075B7F0	116 aa		11.21	□□□□□ -0.62
SMTN-223	ENST00000619644	FABP5P3	A8MUU1	101 aa		11.21	□□□□□ -0.62
SMTN-223	ENST00000619644		E9PLD3	99 aa		11.2	□□□□□ -0.62
SMTN-223	ENST00000619644		F8W1H4	67 aa		11.2	□□□□□ -0.62
SMTN-223	ENST00000619644	GTSCR1	Q86UQ5	136 aa		11.2	□□□□□ -0.62
SMTN-223	ENST00000619644	CEND1	Q8N111	149 aa		11.2	□□□□□ -0.62
SMTN-223	ENST00000619644	ZFP36	P26651	326 aa	Known RBP	11.2	□□□□□ -0.62
SMTN-223	ENST00000619644	ETDB	Q3ZM63	59 aa		11.2	□□□□□ -0.62
SMTN-223	ENST00000619644	TTC9C	Q8N5M4	171 aa		11.2	□□□□□ -0.62
SMTN-223	ENST00000619644	SPATA25	Q9BR10	227 aa		11.2	□□□□□ -0.62
SMTN-223	ENST00000619644	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.2	□□□□□ -0.62	1e-6	■■■■□ 22.9
SMTN-223	ENST00000619644	IGHV7-81	A0A0B4J1V7	117 aa		11.2	□□□□□ -0.62
SMTN-223	ENST00000619644		H3BMG7	143 aa		11.2	□□□□□ -0.62
SMTN-223	ENST00000619644	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.2	□□□□□ -0.62
SMTN-223	ENST00000619644	SPAG8	Q99932	426 aa	Predicted RBP	11.2	□□□□□ -0.62
SMTN-223	ENST00000619644	IGKV3-7	A0A075B6H7	116 aa		11.19	□□□□□ -0.62
SMTN-223	ENST00000619644	TRAV26-2	A0A0B4J265	109 aa		11.19	□□□□□ -0.62
SMTN-223	ENST00000619644	IGLL5	B9A064	214 aa		11.19	□□□□□ -0.62
SMTN-223	ENST00000619644	SPRY2	O43597	315 aa		11.19	□□□□□ -0.62
SMTN-223	ENST00000619644	MTURN	Q8N3F0	131 aa		11.19	□□□□□ -0.62
SMTN-223	ENST00000619644	ZNF479	Q96JC4	524 aa		11.19	□□□□□ -0.62
SMTN-223	ENST00000619644	TM2D2	Q9BX73	214 aa		11.19	□□□□□ -0.62
SMTN-223	ENST00000619644	ZMAT4	Q9H898	229 aa		11.19	□□□□□ -0.62
SMTN-223	ENST00000619644		K7ENP7	123 aa		11.19	□□□□□ -0.62
SMTN-223	ENST00000619644	IGKC	P01834	107 aa		11.19	□□□□□ -0.62
SMTN-223	ENST00000619644		M0R1W7	72 aa		11.18	□□□□□ -0.62
SMTN-223	ENST00000619644	ATP6V0E1	O15342	81 aa		11.18	□□□□□ -0.62
SMTN-223	ENST00000619644	RAB9A	P51151	201 aa		11.18	□□□□□ -0.62
SMTN-223	ENST00000619644	ZC2HC1B	Q5TFG8	222 aa		11.18	□□□□□ -0.62
SMTN-223	ENST00000619644	FOXC2	Q99958	501 aa		11.18	□□□□□ -0.62
SMTN-223	ENST00000619644	LINC01548	A6NM66	108 aa		11.18	□□□□□ -0.62
SMTN-223	ENST00000619644	AMTN	Q6UX39	209 aa		11.18	□□□□□ -0.62
SMTN-223	ENST00000619644	HIVEP3	Q5T1R4	2406 aa		11.18	□□□□□ -0.62
SMTN-223	ENST00000619644	TNFRSF6B	O95407	300 aa		11.18	□□□□□ -0.62
SMTN-223	ENST00000619644		Q6ZQT7	251 aa		11.18	□□□□□ -0.62
SMTN-223	ENST00000619644	TMEM219	Q86XT9	240 aa		11.18	□□□□□ -0.62
SMTN-223	ENST00000619644	UBTD1	Q9HAC8	227 aa		11.18	□□□□□ -0.62
SMTN-223	ENST00000619644	TMEM160	Q9NX00	188 aa		11.18	□□□□□ -0.62
SMTN-223	ENST00000619644	ODF3B	A8MYP8	253 aa		11.17	□□□□□ -0.62
SMTN-223	ENST00000619644	KLK15	Q9H2R5	256 aa		11.17	□□□□□ -0.62
SMTN-223	ENST00000619644	IGHG4	P01861	327 aa		11.17	□□□□□ -0.62
SMTN-223	ENST00000619644	PSMG4	Q5JS54	123 aa		11.17	□□□□□ -0.62
SMTN-223	ENST00000619644	HIF1AN	Q9NWT6	349 aa		11.17	□□□□□ -0.62
SMTN-223	ENST00000619644	TRGV3	P03979	118 aa		11.16	□□□□□ -0.62
SMTN-223	ENST00000619644	FCER1G	P30273	86 aa		11.16	□□□□□ -0.62
SMTN-223	ENST00000619644	CKS1B	P61024	79 aa		11.16	□□□□□ -0.62
SMTN-223	ENST00000619644	RPL11	P62913	178 aa	Known RBP	11.16	□□□□□ -0.62
SMTN-223	ENST00000619644	TMEM78	Q5T7P6	136 aa		11.16	□□□□□ -0.62
SMTN-223	ENST00000619644	TMEM158	Q8WZ71	300 aa		11.16	□□□□□ -0.62
SMTN-223	ENST00000619644	SPANXN1	Q5VSR9	72 aa		11.16	□□□□□ -0.62
SMTN-223	ENST00000619644		Q8N9W7	124 aa		11.16	□□□□□ -0.62
SMTN-223	ENST00000619644	TMEM190	Q8WZ59	177 aa		11.16	□□□□□ -0.62
SMTN-223	ENST00000619644	INSL3	P51460	131 aa		11.16	□□□□□ -0.62
SMTN-223	ENST00000619644	DTX2	Q86UW9	622 aa		11.16	□□□□□ -0.62
SMTN-223	ENST00000619644	RNF185	Q96GF1	192 aa		11.16	□□□□□ -0.62
SMTN-223	ENST00000619644	TMEM8B	A6NDV4	472 aa		11.15	□□□□□ -0.62
SMTN-223	ENST00000619644	DPM2	O94777	84 aa		11.15	□□□□□ -0.62
SMTN-223	ENST00000619644	ATP5G2	Q06055	141 aa		11.15	□□□□□ -0.62
SMTN-223	ENST00000619644	MSRB2	Q9Y3D2	182 aa		11.15	□□□□□ -0.62
SMTN-223	ENST00000619644	IGLC6	P0CF74	106 aa		11.15	□□□□□ -0.62
SMTN-223	ENST00000619644	C12orf74	Q32Q52	190 aa		11.15	□□□□□ -0.62
SMTN-223	ENST00000619644	ZFHX3	Q15911	3703 aa		11.15	□□□□□ -0.62
SMTN-223	ENST00000619644	SAA4	P35542	130 aa		11.14	□□□□□ -0.63
SMTN-223	ENST00000619644	ADORA2A-AS1	P86434	159 aa		11.14	□□□□□ -0.63
SMTN-223	ENST00000619644	MAPKAPK5-AS1	Q8N8E1	139 aa		11.14	□□□□□ -0.63
SMTN-223	ENST00000619644	DEFB104A	Q8WTQ1	72 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms