RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 CLPSL1A2RUU4 121 aa15.7■□□□□ 0.1
NEK3-208ENST00000618534 K7ENP7 123 aa15.7■□□□□ 0.1
NEK3-208ENST00000618534 GCSHP23434 173 aa15.7■□□□□ 0.1
NEK3-208ENST00000618534 C1orf122Q6ZSJ8 110 aa15.7■□□□□ 0.1
NEK3-208ENST00000618534 Q8N8P6 123 aa15.7■□□□□ 0.1
NEK3-208ENST00000618534 SPCS1Q9Y6A9 102 aa15.7■□□□□ 0.1
NEK3-208ENST00000618534 ATP6V0E1O15342 81 aa15.69■□□□□ 0.1
NEK3-208ENST00000618534 FXYD2P54710 66 aa15.69■□□□□ 0.1
NEK3-208ENST00000618534 SPTA1P02549 2419 aa15.69■□□□□ 0.1
NEK3-208ENST00000618534 PTPRQQ9UMZ3 2332 aa15.69■□□□□ 0.1
NEK3-208ENST00000618534 IGHV3-49A0A0A0MS15 119 aa15.69■□□□□ 0.1
NEK3-208ENST00000618534 GTSCR1Q86UQ5 136 aa15.69■□□□□ 0.1
NEK3-208ENST00000618534 SLC50A1Q9BRV3 221 aa15.69■□□□□ 0.1
NEK3-208ENST00000618534 RAB9AP51151 201 aa15.68■□□□□ 0.1
NEK3-208ENST00000618534 CLEC19AQ6UXS0 136 aa15.68■□□□□ 0.1
NEK3-208ENST00000618534 CCDC140Q96MF4 163 aa15.68■□□□□ 0.1
NEK3-208ENST00000618534 CHAC1Q9BUX1 264 aa15.68■□□□□ 0.1
NEK3-208ENST00000618534 GOSR1O95249 250 aa15.68■□□□□ 0.1
NEK3-208ENST00000618534 HIGD1BQ9P298 99 aa15.68■□□□□ 0.1
NEK3-208ENST00000618534 MED13LQ71F56 2210 aa15.68■□□□□ 0.1
NEK3-208ENST00000618534 CACNA1BQ00975 2339 aa15.67■□□□□ 0.1
NEK3-208ENST00000618534 TRAV8-2A0A0B4J237 113 aa15.67■□□□□ 0.1
NEK3-208ENST00000618534 TRAV26-2A0A0B4J265 109 aa15.67■□□□□ 0.1
NEK3-208ENST00000618534 DPM2O94777 84 aa15.67■□□□□ 0.1
NEK3-208ENST00000618534 Q6ZQT7 251 aa15.67■□□□□ 0.1
NEK3-208ENST00000618534 SIRPDQ9H106 197 aa15.67■□□□□ 0.1
NEK3-208ENST00000618534 SVEP1Q4LDE5 3571 aa15.67■□□□□ 0.1
NEK3-208ENST00000618534 TMEM8BA6NDV4 472 aa15.67■□□□□ 0.1
NEK3-208ENST00000618534 ZNF207O43670 478 aaKnown RBP15.67■□□□□ 0.1
NEK3-208ENST00000618534 SMIM13P0DJ93 91 aa15.67■□□□□ 0.1
NEK3-208ENST00000618534 SMIM17P0DL12 118 aa15.67■□□□□ 0.1
NEK3-208ENST00000618534 FOXC1Q12948 553 aa15.67■□□□□ 0.1
NEK3-208ENST00000618534 PSMG4Q5JS54 123 aa15.67■□□□□ 0.1
NEK3-208ENST00000618534 ZC2HC1BQ5TFG8 222 aa15.67■□□□□ 0.1
NEK3-208ENST00000618534 CSTL1Q9H114 145 aa15.67■□□□□ 0.1
NEK3-208ENST00000618534 IGHV7-4-1A0A0J9YVY3 117 aa15.66■□□□□ 0.1
NEK3-208ENST00000618534 ATP5LO75964 103 aa15.66■□□□□ 0.1
NEK3-208ENST00000618534 UFC1Q9Y3C8 167 aa15.66■□□□□ 0.1
NEK3-208ENST00000618534 G3V318 75 aa15.66■□□□□ 0.1
NEK3-208ENST00000618534 TMEM78Q5T7P6 136 aa15.66■□□□□ 0.1
NEK3-208ENST00000618534 NRACQ8N912 160 aa15.66■□□□□ 0.1
NEK3-208ENST00000618534 OR5A1Q8NGJ0 315 aa15.66■□□□□ 0.1
NEK3-208ENST00000618534 TRBV25-1A0A075B6N4 114 aa15.65■□□□□ 0.1
NEK3-208ENST00000618534 K7ERJ3 54 aa15.65■□□□□ 0.1
NEK3-208ENST00000618534 FABP2P12104 132 aa15.65■□□□□ 0.1
NEK3-208ENST00000618534 RIPPLY3P57055 190 aa15.65■□□□□ 0.1
NEK3-208ENST00000618534 ADORA2A-AS1P86434 159 aa15.65■□□□□ 0.1
NEK3-208ENST00000618534 SAMD5Q5TGI4 173 aa15.65■□□□□ 0.1
NEK3-208ENST00000618534 LINC01548A6NM66 108 aa15.65■□□□□ 0.1
NEK3-208ENST00000618534 NEGR1Q7Z3B1 354 aa15.65■□□□□ 0.1
NEK3-208ENST00000618534 TMEM160Q9NX00 188 aa15.65■□□□□ 0.1
NEK3-208ENST00000618534 SMPXQ9UHP9 88 aa15.65■□□□□ 0.1
NEK3-208ENST00000618534 NBASA2RRP1 2371 aa15.65■□□□□ 0.1
NEK3-208ENST00000618534 TRAV40A0A0B4J280 105 aa15.64■□□□□ 0.09
NEK3-208ENST00000618534 C8orf86Q6ZUL3 223 aa15.64■□□□□ 0.09
NEK3-208ENST00000618534 AJUBAQ96IF1 538 aa15.64■□□□□ 0.09
NEK3-208ENST00000618534 MRPL35Q9NZE8 188 aaKnown RBP15.64■□□□□ 0.09
NEK3-208ENST00000618534 G3V4G9 280 aa15.64■□□□□ 0.09
NEK3-208ENST00000618534 LAGE3Q14657 143 aa15.63■□□□□ 0.09
NEK3-208ENST00000618534 PTPRZ1P23471 2315 aaPredicted RBP15.63■□□□□ 0.09
NEK3-208ENST00000618534 ASH1LQ9NR48 2969 aaKnown RBP15.63■□□□□ 0.09
NEK3-208ENST00000618534 KLK9Q2XQG4 91 aa15.63■□□□□ 0.09
NEK3-208ENST00000618534 KLK9Q9UKQ9 250 aa15.63■□□□□ 0.09
NEK3-208ENST00000618534 MUC6Q6W4X9 2439 aa15.62■□□□□ 0.09
NEK3-208ENST00000618534 METTL26Q96S19 204 aa15.62■□□□□ 0.09
NEK3-208ENST00000618534 K7EMI3 77 aa15.61■□□□□ 0.09
NEK3-208ENST00000618534 SPANXN1Q5VSR9 72 aa15.61■□□□□ 0.09
NEK3-208ENST00000618534 MYOZ3Q8TDC0 251 aa15.61■□□□□ 0.09
NEK3-208ENST00000618534 EEF1AKMT3Q96AZ1 226 aa15.61■□□□□ 0.09
NEK3-208ENST00000618534 SAA4P35542 130 aa15.6■□□□□ 0.09
NEK3-208ENST00000618534 EFNA4P52798 201 aa15.6■□□□□ 0.09
NEK3-208ENST00000618534 PHLDA1Q8WV24 401 aaPredicted RBP15.6■□□□□ 0.09
NEK3-208ENST00000618534 NHP2Q9NX24 153 aaKnown RBP15.6■□□□□ 0.09
NEK3-208ENST00000618534 PRSS47A8MTI9 375 aa15.6■□□□□ 0.09
NEK3-208ENST00000618534 C9orf47Q6ZRZ4 202 aa15.6■□□□□ 0.09
NEK3-208ENST00000618534 CEND1Q8N111 149 aa15.6■□□□□ 0.09
NEK3-208ENST00000618534 MAPKAPK5-AS1Q8N8E1 139 aa15.6■□□□□ 0.09
NEK3-208ENST00000618534 MRPL53Q96EL3 112 aaKnown RBP15.6■□□□□ 0.09
NEK3-208ENST00000618534 H3BVH4 76 aa15.59■□□□□ 0.09
NEK3-208ENST00000618534 UBE2E1P51965 193 aa15.59■□□□□ 0.09
NEK3-208ENST00000618534 PRR9Q5T870 116 aa15.59■□□□□ 0.09
NEK3-208ENST00000618534 HLA-DRB4P13762 266 aa15.59■□□□□ 0.09
NEK3-208ENST00000618534 NBL1P41271 181 aa15.59■□□□□ 0.09
NEK3-208ENST00000618534 TM2D2Q9BX73 214 aa15.59■□□□□ 0.09
NEK3-208ENST00000618534 HLA-DRB4X5D2U9 266 aa15.59■□□□□ 0.09
NEK3-208ENST00000618534 IGHV4-4A0A075B6R2 117 aa15.58■□□□□ 0.08
NEK3-208ENST00000618534 A0A087WX48 190 aa15.58■□□□□ 0.08
NEK3-208ENST00000618534 HIF1ANQ9NWT6 349 aa15.58■□□□□ 0.08
NEK3-208ENST00000618534 A0A1W2PPR1 153 aa15.57■□□□□ 0.08
NEK3-208ENST00000618534 U3KQE9 123 aa15.57■□□□□ 0.08
NEK3-208ENST00000618534 TRBV7-1A0A0A6YYK4 115 aa15.57■□□□□ 0.08
NEK3-208ENST00000618534 J3KRW8 73 aa15.56■□□□□ 0.08
NEK3-208ENST00000618534 IGF1P05019 195 aa15.56■□□□□ 0.08
NEK3-208ENST00000618534 SRSF1Q07955 248 aaKnown RBP eCLIP15.56■□□□□ 0.08
NEK3-208ENST00000618534 C16orf92Q96LL3 132 aa15.56■□□□□ 0.08
NEK3-208ENST00000618534 CENPVL3A0A0U1RRI6 287 aa15.56■□□□□ 0.08
NEK3-208ENST00000618534 SPRY2O43597 315 aa15.55■□□□□ 0.08
NEK3-208ENST00000618534 C20orf173Q96LM9 149 aa15.55■□□□□ 0.08
NEK3-208ENST00000618534 SMIM2Q9BVW6 85 aa15.55■□□□□ 0.08
NEK3-208ENST00000618534 MRAP2Q96G30 205 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms