RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 TRAV8-2A0A0B4J237 113 aa5.21□□□□□ -1.57
LMO3-235ENST00000616247 IGHV1-3A0A0C4DH29 117 aa5.21□□□□□ -1.57
LMO3-235ENST00000616247 FAM90A27PA6NNH2 459 aa5.21□□□□□ -1.57
LMO3-235ENST00000616247 H3BRN7 92 aa5.21□□□□□ -1.57
LMO3-235ENST00000616247 TMEM30BQ3MIR4 351 aa5.21□□□□□ -1.57
LMO3-235ENST00000616247 PHLDA1Q8WV24 401 aaPredicted RBP5.21□□□□□ -1.57
LMO3-235ENST00000616247 SPATA25Q9BR10 227 aa5.21□□□□□ -1.57
LMO3-235ENST00000616247 CTSZQ9UBR2 303 aa5.21□□□□□ -1.57
LMO3-235ENST00000616247 I3L2K1 104 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 TIMM23O14925 209 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 SCGB2A1O75556 95 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 SLC25A16P16260 332 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 MFAP4P55083 255 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 XGP55808 180 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 TMEM78Q5T7P6 136 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 GFRALQ6UXV0 394 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 TEX29Q8N6K0 151 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 KIR2DL4Q99706 377 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 K7EIM0 57 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 LOXP28300 417 aaPredicted RBP5.21□□□□□ -1.58
LMO3-235ENST00000616247 GATA4P43694 442 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 IL17RELQ6ZVW7 336 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 C1orf210Q8IVY1 113 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 RAX2Q96IS3 184 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 PRADC1Q9BSG0 188 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 DKK4Q9UBT3 224 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 SMPXQ9UHP9 88 aa5.21□□□□□ -1.58
LMO3-235ENST00000616247 ATMQ13315 3056 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 IGLV3-9A0A075B6K5 115 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 MYMXA0A1B0GTQ4 84 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 LINC01548A6NM66 108 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 TEX22C9J3V5 150 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 PRAC2D3DTV9 90 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 K7EM74 188 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 PVRIGQ6DKI7 326 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 C1QTNF4Q9BXJ3 329 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 SPRY4Q9C004 299 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 DOPEY2Q9Y3R5 2298 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 A8MWV9 139 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 INS-IGF2F8WCM5 200 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 TMEM178BH3BS89 294 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 IGHG3P01860 377 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 RPL11P62913 178 aaKnown RBP5.2□□□□□ -1.58
LMO3-235ENST00000616247 SRSF1Q07955 248 aaKnown RBP eCLIP5.2□□□□□ -1.58
LMO3-235ENST00000616247 ZFAND6Q6FIF0 208 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 Q6ZUT4 128 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 DYNAPQ8N1N2 210 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 LYPD1Q8N2G4 141 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 Q8N8P6 123 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 RNF185Q96GF1 192 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 C21orf62Q9NYP8 219 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 U3KQK5 164 aa5.2□□□□□ -1.58
LMO3-235ENST00000616247 H7C1H1 209 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 CLEC3BP05452 202 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 BSPH1Q075Z2 132 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 TTC32Q5I0X7 151 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 TCTEX1D4Q5JR98 221 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 TMEM170BQ5T4T1 132 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 SEM1Q6ZVN7 128 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 NFE4Q86UQ8 179 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 CFHR4Q92496 578 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 IGHV3-64A0A075B6Q5 118 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 A0A087WX48 190 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 OVOL3O00110 214 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 FCN3O75636 299 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 PLNP26678 52 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 ADIPOQQ15848 244 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 C9JAW5 83 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 F8VRH5 84 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 LCE2BO14633 110 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 ECSCRQ19T08 205 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 PSMG4Q5JS54 123 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 TEX36Q5VZQ5 186 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 Q6ZQT7 251 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 C3orf56Q8N813 242 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 TECTAO75443 2155 aa5.19□□□□□ -1.58
LMO3-235ENST00000616247 F5H697 171 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 BUB1B-PAK6H3BSN5 160 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 SNCGO76070 127 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 DLX6P56179 175 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 MRGPRG-AS1Q2M3A8 158 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 TMEM155Q4W5P6 130 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 C14orf178Q8N769 122 aaPredicted RBP5.18□□□□□ -1.58
LMO3-235ENST00000616247 PPDPFLQ8WWR9 84 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 PLEKHB2Q96CS7 222 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.18□□□□□ -1.58
LMO3-235ENST00000616247 LY6HO94772 140 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 IGHV4-39P01824 125 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 GAGE2BQ13066 116 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 KLRD1Q13241 179 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 GAGE2EQ4V326 116 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 LYRM7Q5U5X0 104 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 CDIP1Q9H305 208 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 LINC00574Q9H8X3 128 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 GAGE2DQ9UEU5 116 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 RNF223E7ERA6 249 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 LGALS1P09382 135 aaKnown RBP5.18□□□□□ -1.58
LMO3-235ENST00000616247 MORN3Q6PF18 240 aaPredicted RBP5.18□□□□□ -1.58
LMO3-235ENST00000616247 SMIM20Q8N5G0 67 aa5.18□□□□□ -1.58
LMO3-235ENST00000616247 SMG1Q96Q15 3661 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms