RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 SLAQ13239 276 aa14.17□□□□□ -0.14
TRAPPC3-208ENST00000616074 LYPD5Q6UWN5 251 aa14.17□□□□□ -0.14
TRAPPC3-208ENST00000616074 WDR61Q9GZS3 305 aaKnown RBP14.17□□□□□ -0.14
TRAPPC3-208ENST00000616074 TRBV7-9A0A0J9YWB2 115 aa14.16□□□□□ -0.14
TRAPPC3-208ENST00000616074 PRAF2O60831 178 aa14.16□□□□□ -0.14
TRAPPC3-208ENST00000616074 LRRC37A5PQ49AS3 106 aa14.16□□□□□ -0.14
TRAPPC3-208ENST00000616074 MUC21Q5SSG8 566 aa14.16□□□□□ -0.14
TRAPPC3-208ENST00000616074 MZT2BQ6NZ67 158 aa14.16□□□□□ -0.14
TRAPPC3-208ENST00000616074 KCNIP2Q9NS61 270 aa14.16□□□□□ -0.14
TRAPPC3-208ENST00000616074 NDUFA13Q9P0J0 144 aa14.16□□□□□ -0.14
TRAPPC3-208ENST00000616074 HERC1Q15751 4861 aa14.16□□□□□ -0.14
TRAPPC3-208ENST00000616074 H0YIZ8 118 aa14.15□□□□□ -0.14
TRAPPC3-208ENST00000616074 OR7C2O60412 319 aa14.15□□□□□ -0.14
TRAPPC3-208ENST00000616074 ERVFC1-1P60608 527 aa14.15□□□□□ -0.14
TRAPPC3-208ENST00000616074 ASAH1Q13510 395 aa14.15□□□□□ -0.14
TRAPPC3-208ENST00000616074 MRPL23Q16540 153 aaKnown RBP14.15□□□□□ -0.14
TRAPPC3-208ENST00000616074 NMES1Q9C002 83 aa14.15□□□□□ -0.14
TRAPPC3-208ENST00000616074 MDFICQ9P1T7 246 aa14.15□□□□□ -0.14
TRAPPC3-208ENST00000616074 SFTA3P0C7M3 94 aa14.14□□□□□ -0.15
TRAPPC3-208ENST00000616074 RANP62826 216 aaKnown RBP14.14□□□□□ -0.15
TRAPPC3-208ENST00000616074 ZNF266Q14584 549 aa14.14□□□□□ -0.15
TRAPPC3-208ENST00000616074 PGPEP1Q9NXJ5 209 aa14.14□□□□□ -0.15
TRAPPC3-208ENST00000616074 TRGV4A0A0C4DH28 118 aa14.13□□□□□ -0.15
TRAPPC3-208ENST00000616074 RBAKDNA6NC62 111 aa14.13□□□□□ -0.15
TRAPPC3-208ENST00000616074 CSN1S1P47710 185 aa14.13□□□□□ -0.15
TRAPPC3-208ENST00000616074 NEGR1Q7Z3B1 354 aa14.13□□□□□ -0.15
TRAPPC3-208ENST00000616074 ZNF479Q96JC4 524 aa14.13□□□□□ -0.15
TRAPPC3-208ENST00000616074 C17orf112F2Z3M2 114 aa14.12□□□□□ -0.15
TRAPPC3-208ENST00000616074 K7EQD1 137 aa14.12□□□□□ -0.15
TRAPPC3-208ENST00000616074 EREGO14944 169 aa14.12□□□□□ -0.15
TRAPPC3-208ENST00000616074 UBE2L3P68036 154 aaKnown RBP14.12□□□□□ -0.15
TRAPPC3-208ENST00000616074 LYPD1Q8N2G4 141 aa14.12□□□□□ -0.15
TRAPPC3-208ENST00000616074 DNAH10OSP0CZ25 163 aa14.11□□□□□ -0.15
TRAPPC3-208ENST00000616074 SRIP30626 198 aa14.11□□□□□ -0.15
TRAPPC3-208ENST00000616074 TMEM183BQ1AE95 376 aa14.11□□□□□ -0.15
TRAPPC3-208ENST00000616074 Q6AWC8 147 aa14.11□□□□□ -0.15
TRAPPC3-208ENST00000616074 NFE4Q86UQ8 179 aa14.11□□□□□ -0.15
TRAPPC3-208ENST00000616074 WFDC10BQ8IUB3 73 aa14.11□□□□□ -0.15
TRAPPC3-208ENST00000616074 TMEM183AQ8IXX5 376 aa14.11□□□□□ -0.15
TRAPPC3-208ENST00000616074 OR10G4Q8NGN3 311 aa14.11□□□□□ -0.15
TRAPPC3-208ENST00000616074 ENKURQ8TC29 256 aa14.11□□□□□ -0.15
TRAPPC3-208ENST00000616074 LY96Q9Y6Y9 160 aa14.11□□□□□ -0.15
TRAPPC3-208ENST00000616074 DIRC3C9JPN6 131 aa14.1□□□□□ -0.15
TRAPPC3-208ENST00000616074 CDPF1Q6NVV7 123 aa14.1□□□□□ -0.15
TRAPPC3-208ENST00000616074 IQCF2Q8IXL9 164 aa14.1□□□□□ -0.15
TRAPPC3-208ENST00000616074 RASL10AQ92737 203 aa14.1□□□□□ -0.15
TRAPPC3-208ENST00000616074 ATP5SQ99766 215 aa14.1□□□□□ -0.15
TRAPPC3-208ENST00000616074 A0A087WTM6 91 aa14.09□□□□□ -0.15
TRAPPC3-208ENST00000616074 EPM2AB3EWF7 344 aa14.09□□□□□ -0.15
TRAPPC3-208ENST00000616074 GYPEP15421 78 aa14.09□□□□□ -0.15
TRAPPC3-208ENST00000616074 FFAR4Q5NUL3 377 aa14.09□□□□□ -0.15
TRAPPC3-208ENST00000616074 FAM159AQ6UWV7 190 aa14.09□□□□□ -0.15
TRAPPC3-208ENST00000616074 LINC00299Q6ZSB3 139 aa14.09□□□□□ -0.15
TRAPPC3-208ENST00000616074 SPXQ9BT56 116 aa14.09□□□□□ -0.15
TRAPPC3-208ENST00000616074 PTTG2Q9NZH5 202 aa14.09□□□□□ -0.15
TRAPPC3-208ENST00000616074 LENEPQ9Y5L5 61 aa14.09□□□□□ -0.15
TRAPPC3-208ENST00000616074 TRGV11A0A075B6L2 103 aa14.08□□□□□ -0.16
TRAPPC3-208ENST00000616074 TRAV9-2A0A087WT02 112 aa14.08□□□□□ -0.16
TRAPPC3-208ENST00000616074 EIF3GO75821 320 aaKnown RBP eCLIP14.08□□□□□ -0.16
TRAPPC3-208ENST00000616074 XGP55808 180 aa14.08□□□□□ -0.16
TRAPPC3-208ENST00000616074 CYCSP99999 105 aaKnown RBP14.08□□□□□ -0.16
TRAPPC3-208ENST00000616074 KHDC3LQ587J8 217 aa14.08□□□□□ -0.16
TRAPPC3-208ENST00000616074 PCNPQ8WW12 178 aaKnown RBP14.08□□□□□ -0.16
TRAPPC3-208ENST00000616074 S100ZQ8WXG8 99 aa14.08□□□□□ -0.16
TRAPPC3-208ENST00000616074 VPS13BQ7Z7G8 4022 aa14.07□□□□□ -0.16
TRAPPC3-208ENST00000616074 H2BFSP57053 126 aa14.07□□□□□ -0.16
TRAPPC3-208ENST00000616074 PPP1R1CQ8WVI7 109 aa14.07□□□□□ -0.16
TRAPPC3-208ENST00000616074 HYLS1Q96M11 299 aa14.07□□□□□ -0.16
TRAPPC3-208ENST00000616074 MSRB1Q9NZV6 116 aa14.07□□□□□ -0.16
TRAPPC3-208ENST00000616074 NAGKQ9UJ70 344 aa14.07□□□□□ -0.16
TRAPPC3-208ENST00000616074 HSPB11Q9Y547 144 aa14.07□□□□□ -0.16
TRAPPC3-208ENST00000616074 ORM1P02763 201 aa14.06□□□□□ -0.16
TRAPPC3-208ENST00000616074 TMED6Q8WW62 240 aa14.06□□□□□ -0.16
TRAPPC3-208ENST00000616074 TRAV4A0A0B4J268 109 aa14.05□□□□□ -0.16
TRAPPC3-208ENST00000616074 UPK1BO75841 260 aa14.05□□□□□ -0.16
TRAPPC3-208ENST00000616074 EVI2AP22794 236 aa14.05□□□□□ -0.16
TRAPPC3-208ENST00000616074 TAS2R45P59539 299 aa14.05□□□□□ -0.16
TRAPPC3-208ENST00000616074 KRTAP10-1P60331 282 aa14.05□□□□□ -0.16
TRAPPC3-208ENST00000616074 TDRG1Q3Y452 100 aa14.05□□□□□ -0.16
TRAPPC3-208ENST00000616074 SMIM3Q9BZL3 60 aa14.05□□□□□ -0.16
TRAPPC3-208ENST00000616074 RPH3ALQ9UNE2 315 aa14.05□□□□□ -0.16
TRAPPC3-208ENST00000616074 C9JCJ5 164 aa14.04□□□□□ -0.16
TRAPPC3-208ENST00000616074 INMT-MINDY4F8WBC2 141 aa14.04□□□□□ -0.16
TRAPPC3-208ENST00000616074 K7EP13 123 aa14.04□□□□□ -0.16
TRAPPC3-208ENST00000616074 GNRH2O43555 120 aa14.04□□□□□ -0.16
TRAPPC3-208ENST00000616074 IFITM3Q01628 133 aa14.04□□□□□ -0.16
TRAPPC3-208ENST00000616074 TXNDC17Q9BRA2 123 aa14.04□□□□□ -0.16
TRAPPC3-208ENST00000616074 OTORQ9NRC9 128 aa14.04□□□□□ -0.16
TRAPPC3-208ENST00000616074 IGHV3-16A0A0C4DH30 117 aa14.03□□□□□ -0.16
TRAPPC3-208ENST00000616074 LOC100131303A0A0U1RQF7 123 aa14.03□□□□□ -0.16
TRAPPC3-208ENST00000616074 PGPA6NDG6 321 aa14.03□□□□□ -0.16
TRAPPC3-208ENST00000616074 MPC2O95563 127 aa14.03□□□□□ -0.16
TRAPPC3-208ENST00000616074 IFNA5P01569 189 aa14.03□□□□□ -0.16
TRAPPC3-208ENST00000616074 OR4C5Q8NGB2 326 aa14.03□□□□□ -0.16
TRAPPC3-208ENST00000616074 CMTM2Q8TAZ6 248 aa14.03□□□□□ -0.16
TRAPPC3-208ENST00000616074 SCGB1C1Q8TD33 95 aa14.03□□□□□ -0.16
TRAPPC3-208ENST00000616074 MBD2Q9UBB5 411 aa14.03□□□□□ -0.16
TRAPPC3-208ENST00000616074 F6UZH7 168 aa14.02□□□□□ -0.17
TRAPPC3-208ENST00000616074 M0R2P5 195 aa14.02□□□□□ -0.17
TRAPPC3-208ENST00000616074 GOLT1AQ6ZVE7 132 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms