RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 TNFRSF6BO95407 300 aa8.61□□□□□ -1.03
CDH4-202ENST00000611855 DLX6P56179 175 aa8.61□□□□□ -1.03
CDH4-202ENST00000611855 DEFB124Q8NES8 71 aa8.61□□□□□ -1.03
CDH4-202ENST00000611855 AAMDCQ9H7C9 122 aa8.61□□□□□ -1.03
CDH4-202ENST00000611855 TMEM14CQ9P0S9 112 aa8.61□□□□□ -1.03
CDH4-202ENST00000611855 PRO0461Q9UI25 63 aa8.61□□□□□ -1.03
CDH4-202ENST00000611855 NCBP2LA6PVI3 153 aaKnown RBP8.6□□□□□ -1.03
CDH4-202ENST00000611855 H3BRN7 92 aa8.6□□□□□ -1.03
CDH4-202ENST00000611855 HOXA3O43365 443 aaPredicted RBP8.6□□□□□ -1.03
CDH4-202ENST00000611855 FHL3Q13643 280 aa8.6□□□□□ -1.03
CDH4-202ENST00000611855 Q6ZUT4 128 aa8.6□□□□□ -1.03
CDH4-202ENST00000611855 UFC1Q9Y3C8 167 aa8.6□□□□□ -1.03
CDH4-202ENST00000611855 IGHV3OR16-13A0A075B7E8 117 aa8.6□□□□□ -1.03
CDH4-202ENST00000611855 IGHV3-74A0A0B4J1X5 117 aa8.6□□□□□ -1.03
CDH4-202ENST00000611855 LINC01549A6NIU2 74 aa8.6□□□□□ -1.03
CDH4-202ENST00000611855 FAM90A27PA6NNH2 459 aa8.6□□□□□ -1.03
CDH4-202ENST00000611855 PAX8Q06710 450 aa8.6□□□□□ -1.03
CDH4-202ENST00000611855 ZFP2Q6ZN57 461 aa8.6□□□□□ -1.03
CDH4-202ENST00000611855 MYOZ3Q8TDC0 251 aa8.6□□□□□ -1.03
CDH4-202ENST00000611855 U3KQK5 164 aa8.6□□□□□ -1.03
CDH4-202ENST00000611855 ANKHD1Q8IWZ3 2542 aaKnown RBP8.6□□□□□ -1.03
CDH4-202ENST00000611855 TRAV26-2A0A0B4J265 109 aa8.6□□□□□ -1.03
CDH4-202ENST00000611855 C1QTNF4Q9BXJ3 329 aa8.6□□□□□ -1.03
CDH4-202ENST00000611855 CRYGBP07316 175 aa8.59□□□□□ -1.03
CDH4-202ENST00000611855 ERCC8Q13216 396 aa8.59□□□□□ -1.03
CDH4-202ENST00000611855 HES1Q14469 280 aa8.59□□□□□ -1.03
CDH4-202ENST00000611855 LINC00311Q8N616 119 aa8.59□□□□□ -1.03
CDH4-202ENST00000611855 IGHV3-66A0A0C4DH42 116 aa8.59□□□□□ -1.03
CDH4-202ENST00000611855 SRSF9Q13242 221 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDH4-202ENST00000611855 SCGB1D4Q6XE38 83 aa8.59□□□□□ -1.03
CDH4-202ENST00000611855 KIR2DL4Q99706 377 aa8.59□□□□□ -1.03
CDH4-202ENST00000611855 MAP1AP78559 2803 aaPredicted RBP8.59□□□□□ -1.03
CDH4-202ENST00000611855 TIMM23O14925 209 aa8.59□□□□□ -1.04
CDH4-202ENST00000611855 HLA-DRB4P13762 266 aa8.59□□□□□ -1.04
CDH4-202ENST00000611855 SMCPP49901 116 aaPredicted RBP8.59□□□□□ -1.04
CDH4-202ENST00000611855 HLA-DRB4X5D2U9 266 aa8.59□□□□□ -1.04
CDH4-202ENST00000611855 OR11H12B2RN74 326 aa8.58□□□□□ -1.04
CDH4-202ENST00000611855 BUB1B-PAK6H3BSN5 160 aa8.58□□□□□ -1.04
CDH4-202ENST00000611855 LY6HO94772 140 aa8.58□□□□□ -1.04
CDH4-202ENST00000611855 OR11H1Q8NG94 326 aa8.58□□□□□ -1.04
CDH4-202ENST00000611855 OR11H2Q8NH07 326 aa8.58□□□□□ -1.04
CDH4-202ENST00000611855 DEFB104AQ8WTQ1 72 aa8.58□□□□□ -1.04
CDH4-202ENST00000611855 PIEZO1Q92508 2521 aa8.58□□□□□ -1.04
CDH4-202ENST00000611855 SPRY2O43597 315 aa8.58□□□□□ -1.04
CDH4-202ENST00000611855 IGFL2Q6UWQ7 119 aa8.58□□□□□ -1.04
CDH4-202ENST00000611855 GFRALQ6UXV0 394 aa8.58□□□□□ -1.04
CDH4-202ENST00000611855 GATD1Q8NB37 220 aa8.58□□□□□ -1.04
CDH4-202ENST00000611855 DLX4Q92988 240 aaPredicted RBP8.58□□□□□ -1.04
CDH4-202ENST00000611855 ONECUT1Q9UBC0 465 aa8.58□□□□□ -1.04
CDH4-202ENST00000611855 TRBV20-1A0A075B6N2 111 aa8.57□□□□□ -1.04
CDH4-202ENST00000611855 ATP5LO75964 103 aa8.57□□□□□ -1.04
CDH4-202ENST00000611855 KLRD1Q13241 179 aa8.57□□□□□ -1.04
CDH4-202ENST00000611855 PRR25Q96S07 402 aa8.57□□□□□ -1.04
CDH4-202ENST00000611855 IGHV3-49A0A0A0MS15 119 aa8.57□□□□□ -1.04
CDH4-202ENST00000611855 MRPS12O15235 138 aaKnown RBP8.57□□□□□ -1.04
CDH4-202ENST00000611855 C3orf36Q3SXR2 165 aa8.57□□□□□ -1.04
CDH4-202ENST00000611855 PVRIGQ6DKI7 326 aa8.57□□□□□ -1.04
CDH4-202ENST00000611855 RNASE6Q93091 150 aaKnown RBP8.57□□□□□ -1.04
CDH4-202ENST00000611855 VKORC1Q9BQB6 163 aa8.57□□□□□ -1.04
CDH4-202ENST00000611855 NXT2Q9NPJ8 142 aaKnown RBP8.57□□□□□ -1.04
CDH4-202ENST00000611855 BSNQ9UPA5 3926 aa8.57□□□□□ -1.04
CDH4-202ENST00000611855 THBDP07204 575 aa8.57□□□□□ -1.04
CDH4-202ENST00000611855 PRTN3P24158 256 aa8.57□□□□□ -1.04
CDH4-202ENST00000611855 PLA2G2CQ5R387 149 aa8.57□□□□□ -1.04
CDH4-202ENST00000611855 MORN3Q6PF18 240 aaPredicted RBP8.57□□□□□ -1.04
CDH4-202ENST00000611855 RNF182Q8N6D2 247 aa8.57□□□□□ -1.04
CDH4-202ENST00000611855 RNF185Q96GF1 192 aa8.57□□□□□ -1.04
CDH4-202ENST00000611855 ZMAT4Q9H898 229 aa8.57□□□□□ -1.04
CDH4-202ENST00000611855 IGLV1-47P01700 117 aa8.56□□□□□ -1.04
CDH4-202ENST00000611855 SCGB1C2P0DMR2 95 aa8.56□□□□□ -1.04
CDH4-202ENST00000611855 Q6ZQT7 251 aa8.56□□□□□ -1.04
CDH4-202ENST00000611855 ERG28Q9UKR5 140 aa8.56□□□□□ -1.04
CDH4-202ENST00000611855 A0A0G2JNJ9 132 aa8.56□□□□□ -1.04
CDH4-202ENST00000611855 PRAC2D3DTV9 90 aa8.56□□□□□ -1.04
CDH4-202ENST00000611855 CFAP126Q5VTH2 177 aa8.56□□□□□ -1.04
CDH4-202ENST00000611855 TEX29Q8N6K0 151 aa8.56□□□□□ -1.04
CDH4-202ENST00000611855 Q9UFV3 132 aa8.56□□□□□ -1.04
CDH4-202ENST00000611855 TRGV3P03979 118 aa8.55□□□□□ -1.04
CDH4-202ENST00000611855 NUP37Q8NFH4 326 aa8.55□□□□□ -1.04
CDH4-202ENST00000611855 SPTAN1Q13813 2472 aaKnown RBP8.55□□□□□ -1.04
CDH4-202ENST00000611855 J3KRW8 73 aa8.55□□□□□ -1.04
CDH4-202ENST00000611855 ZFAND6Q6FIF0 208 aa8.55□□□□□ -1.04
CDH4-202ENST00000611855 DTX2Q86UW9 622 aa8.55□□□□□ -1.04
CDH4-202ENST00000611855 SHISA2Q6UWI4 295 aa8.55□□□□□ -1.04
CDH4-202ENST00000611855 TRBV7-3A0A075B6L6 115 aa8.54□□□□□ -1.04
CDH4-202ENST00000611855 TNFRSF13BO14836 293 aaPredicted RBP8.54□□□□□ -1.04
CDH4-202ENST00000611855 TSPAN13O95857 204 aa8.54□□□□□ -1.04
CDH4-202ENST00000611855 SRSF1Q07955 248 aaKnown RBP eCLIP8.54□□□□□ -1.04
CDH4-202ENST00000611855 GAGE5Q13069 117 aa8.54□□□□□ -1.04
CDH4-202ENST00000611855 GAGE6Q13070 117 aa8.54□□□□□ -1.04
CDH4-202ENST00000611855 SMIM20Q8N5G0 67 aa8.54□□□□□ -1.04
CDH4-202ENST00000611855 CARD19Q96LW7 228 aa8.54□□□□□ -1.04
CDH4-202ENST00000611855 RAXQ9Y2V3 346 aa8.54□□□□□ -1.04
CDH4-202ENST00000611855 TRBV6-1A0A0K0K1D8 114 aa8.54□□□□□ -1.04
CDH4-202ENST00000611855 MYMXA0A1B0GTQ4 84 aa8.54□□□□□ -1.04
CDH4-202ENST00000611855 ZNF815PA8K554 130 aa8.54□□□□□ -1.04
CDH4-202ENST00000611855 H7C2G1 150 aa8.54□□□□□ -1.04
CDH4-202ENST00000611855 EMP1P54849 157 aa8.54□□□□□ -1.04
CDH4-202ENST00000611855 C5orf64Q2M2E5 130 aa8.54□□□□□ -1.04
CDH4-202ENST00000611855 CFAP161Q6P656 301 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms