RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 IGKCP01834 107 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 GYPBP06028 91 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 EVI2AP22794 236 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 RPS3P23396 243 aaKnown RBP eCLIP-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 KDELR1P24390 212 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 SDC2P34741 201 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 NDUFA6P56556 154 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 LINC00305Q7Z4B0 112 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 STX12Q86Y82 276 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 TCTEX1D1Q8N7M0 179 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 OR5AK2Q8NH90 309 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 THEM6Q8WUY1 208 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 NAT14Q8WUY8 206 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 PCBD2Q9H0N5 130 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 MRPL35Q9NZE8 188 aaKnown RBP-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 MED31Q9Y3C7 131 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 MPC1Q9Y5U8 109 aa-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 TPRP12270 2363 aaKnown RBP-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 SYNE2Q8WXH0 6885 aaKnown RBP-0.09□□□□□ -2.42
SNORA28-201ENST00000606769 FER1L6Q2WGJ9 1857 aa-0.1□□□□□ -2.42
SNORA28-201ENST00000606769 TRPM7Q96QT4 1865 aa-0.1□□□□□ -2.42
SNORA28-201ENST00000606769 PIEZO1Q92508 2521 aa-0.1□□□□□ -2.42
SNORA28-201ENST00000606769 LOC107984156A0A0G2JMH3 177 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 A0A1W2PPB8 328 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 KIR3DP1A8MWS1 328 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 SAA1P0DJI8 122 aaPredicted RBP-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 TPT1P13693 172 aaKnown RBP-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 CRYGSP22914 178 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 SNRPD3P62318 126 aaKnown RBP-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 BLCAPP62952 87 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 Q5XG85 94 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 LYPD5Q6UWN5 251 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 SPINK6Q6UWN8 80 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 ARL17AQ8IVW1 177 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 TMEM229BQ8NBD8 167 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 OR51A4Q8NGJ6 313 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 ISOC1Q96CN7 298 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 MRPL36Q9P0J6 103 aaKnown RBP-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 LAMTOR3Q9UHA4 124 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 TRAPPC2LQ9UL33 140 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 KDM6BO15054 1643 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 ROCK1Q13464 1354 aa-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 HRNRQ86YZ3 2850 aaPredicted RBP-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.1□□□□□ -2.43
SNORA28-201ENST00000606769 CACNA1HO95180 2353 aa-0.11□□□□□ -2.43
SNORA28-201ENST00000606769 PTPRGP23470 1445 aa-0.11□□□□□ -2.43
SNORA28-201ENST00000606769 TTC28Q96AY4 2481 aa-0.11□□□□□ -2.43
SNORA28-201ENST00000606769 LRP5O75197 1615 aa-0.11□□□□□ -2.43
SNORA28-201ENST00000606769 TRAV13-1A0A0B4J241 112 aa-0.11□□□□□ -2.43
SNORA28-201ENST00000606769 C5orf58C9J3I9 102 aa-0.11□□□□□ -2.43
SNORA28-201ENST00000606769 E5RI56 91 aa-0.11□□□□□ -2.43
SNORA28-201ENST00000606769 H3BMG7 143 aa-0.11□□□□□ -2.43
SNORA28-201ENST00000606769 M0QZK8 103 aa-0.11□□□□□ -2.43
SNORA28-201ENST00000606769 SPINK13Q1W4C9 94 aa-0.11□□□□□ -2.43
SNORA28-201ENST00000606769 TRIQKQ629K1 86 aa-0.11□□□□□ -2.43
SNORA28-201ENST00000606769 GRPEL2Q8TAA5 225 aa-0.11□□□□□ -2.43
SNORA28-201ENST00000606769 SPRR2GQ9BYE4 73 aa-0.11□□□□□ -2.43
SNORA28-201ENST00000606769 PBRM1Q86U86 1689 aa-0.11□□□□□ -2.43
SNORA28-201ENST00000606769 TANC1Q9C0D5 1861 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 AFDNP55196 1824 aaKnown RBP-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 TMEM30CPA0ZSE6 113 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 EDF1O60869 148 aaKnown RBP-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 HBDP02042 147 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 SLC25A5P05141 298 aaKnown RBP-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 FABP1P07148 127 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 RPL22P35268 128 aaKnown RBP-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 FXYD6P3P58550 94 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 DNAJB13P59910 316 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 ESPL1Q14674 2120 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 CCSMST1Q4G0I0 132 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 C3orf62Q6ZUJ4 267 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 OR5A2Q8NGI9 324 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 OTOSQ8NHW6 89 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 BRK1Q8WUW1 75 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 CCDC115Q96NT0 180 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 PROK2Q9HC23 129 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 C19orf12Q9NSK7 152 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 LAMTOR2Q9Y2Q5 125 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 RREB1Q92766 1687 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 RBBP6Q7Z6E9 1792 aaKnown RBP-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 KIDINS220Q9ULH0 1771 aa-0.12□□□□□ -2.43
SNORA28-201ENST00000606769 ARHGAP31Q2M1Z3 1444 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 ATG2AQ2TAZ0 1938 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 ZFYVE26Q68DK2 2539 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 FSIP2Q5CZC0 6907 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 ABCA1O95477 2261 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 DLEC1Q9Y238 1755 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 A2MP01023 1474 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 CDK12Q9NYV4 1490 aaPredicted RBP-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 LOC107986453A0A1B0GWG9 222 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 TMEM189A5PLL7 270 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 ARL5CA6NH57 179 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 BBIP1A8MTZ0 92 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 HIGD1CA8MV81 97 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 FXYD1O00168 92 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 TFF1P04155 84 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 IL7P13232 177 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 GTF2A1P52655 376 aaPredicted RBP-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 RHOHQ15669 191 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 CROCCP2Q86T23 111 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms