RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 LINC00312Q9Y6C7 94 aa12.15□□□□□ -0.46
PPFIA3-206ENST00000602655 HARBI1Q96MB7 349 aa12.14□□□□□ -0.47
PPFIA3-206ENST00000602655 CCDC179H3BU77 68 aa12.14□□□□□ -0.47
PPFIA3-206ENST00000602655 HIST2H2BCQ6DN03 193 aa12.14□□□□□ -0.47
PPFIA3-206ENST00000602655 IFI27L2Q9H2X8 130 aa12.14□□□□□ -0.47
PPFIA3-206ENST00000602655 TET2Q6N021 2002 aaPredicted RBP12.14□□□□□ -0.47
PPFIA3-206ENST00000602655 SNCGO76070 127 aa12.14□□□□□ -0.47
PPFIA3-206ENST00000602655 TM2D2Q9BX73 214 aa12.14□□□□□ -0.47
PPFIA3-206ENST00000602655 RRN3P1Q2M238 152 aa12.13□□□□□ -0.47
PPFIA3-206ENST00000602655 MRPL20Q9BYC9 149 aaKnown RBP12.13□□□□□ -0.47
PPFIA3-206ENST00000602655 PRNDQ9UKY0 176 aa12.13□□□□□ -0.47
PPFIA3-206ENST00000602655 ERHP84090 104 aaKnown RBP12.13□□□□□ -0.47
PPFIA3-206ENST00000602655 EIF4EBP1Q13541 118 aaPredicted RBP12.13□□□□□ -0.47
PPFIA3-206ENST00000602655 PLGLAQ15195 96 aa12.13□□□□□ -0.47
PPFIA3-206ENST00000602655 RAB1BQ9H0U4 201 aa12.13□□□□□ -0.47
PPFIA3-206ENST00000602655 TMEM213A2RRL7 107 aa12.13□□□□□ -0.47
PPFIA3-206ENST00000602655 CT45A10P0DMU9 189 aa12.13□□□□□ -0.47
PPFIA3-206ENST00000602655 LOXL3P58215 753 aa12.13□□□□□ -0.47
PPFIA3-206ENST00000602655 ZNF562Q6V9R5 426 aa12.13□□□□□ -0.47
PPFIA3-206ENST00000602655 ORMDL3Q8N138 153 aa12.13□□□□□ -0.47
PPFIA3-206ENST00000602655 HOXA3O43365 443 aaPredicted RBP12.12□□□□□ -0.47
PPFIA3-206ENST00000602655 NFE4Q86UQ8 179 aa12.12□□□□□ -0.47
PPFIA3-206ENST00000602655 TRAV8-2A0A0B4J237 113 aa12.12□□□□□ -0.47
PPFIA3-206ENST00000602655 HAX1O00165 279 aa12.12□□□□□ -0.47
PPFIA3-206ENST00000602655 IGKCP01834 107 aa12.12□□□□□ -0.47
PPFIA3-206ENST00000602655 Q6AWC8 147 aa12.12□□□□□ -0.47
PPFIA3-206ENST00000602655 FAM110AQ9BQ89 295 aa12.12□□□□□ -0.47
PPFIA3-206ENST00000602655 LEPP41159 167 aa12.12□□□□□ -0.47
PPFIA3-206ENST00000602655 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.12□□□□□ -0.47
PPFIA3-206ENST00000602655 Q9H3A6 140 aa12.12□□□□□ -0.47
PPFIA3-206ENST00000602655 CD69Q07108 199 aa12.11□□□□□ -0.47
PPFIA3-206ENST00000602655 SRSF9Q13242 221 aaKnown RBP eCLIP12.11□□□□□ -0.47
PPFIA3-206ENST00000602655 KLF17Q5JT82 389 aaPredicted RBP12.11□□□□□ -0.47
PPFIA3-206ENST00000602655 SLC25A48Q6ZT89 311 aaKnown RBP12.11□□□□□ -0.47
PPFIA3-206ENST00000602655 DLX4Q92988 240 aaPredicted RBP12.11□□□□□ -0.47
PPFIA3-206ENST00000602655 S4R3C0 116 aa12.11□□□□□ -0.47
PPFIA3-206ENST00000602655 TRAV40A0A0B4J280 105 aa12.11□□□□□ -0.47
PPFIA3-206ENST00000602655 NDUFA3O95167 84 aa12.11□□□□□ -0.47
PPFIA3-206ENST00000602655 ITLN2Q8WWU7 325 aaPredicted RBP12.11□□□□□ -0.47
PPFIA3-206ENST00000602655 RPEQ96AT9 228 aa12.11□□□□□ -0.47
PPFIA3-206ENST00000602655 FXYD5Q96DB9 178 aa12.11□□□□□ -0.47
PPFIA3-206ENST00000602655 YAE1D1Q9NRH1 226 aa12.11□□□□□ -0.47
PPFIA3-206ENST00000602655 ITPR2Q14571 2701 aa12.1□□□□□ -0.47
PPFIA3-206ENST00000602655 A0A096LNJ9 63 aa12.1□□□□□ -0.47
PPFIA3-206ENST00000602655 EXOC3-AS1Q8N2X6 119 aa12.1□□□□□ -0.47
PPFIA3-206ENST00000602655 PHLDA1Q8WV24 401 aaPredicted RBP12.1□□□□□ -0.47
PPFIA3-206ENST00000602655 TCRAP04437 139 aa12.1□□□□□ -0.47
PPFIA3-206ENST00000602655 Q71RC1 249 aaPredicted RBP12.1□□□□□ -0.47
PPFIA3-206ENST00000602655 FMC1Q96HJ9 113 aa12.1□□□□□ -0.47
PPFIA3-206ENST00000602655 RITA1Q96K30 269 aa12.1□□□□□ -0.47
PPFIA3-206ENST00000602655 CNTFRP26992 372 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 HCP5Q6MZN7 132 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 PPDPFLQ8WWR9 84 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 TIMD4Q96H15 378 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 PRSS22Q9GZN4 317 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 ZFHX3Q15911 3703 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 TMEM8BA6NDV4 472 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 LINC01549A6NIU2 74 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 SRRM4A7MD48 611 aaKnown RBP12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 LOXP28300 417 aaPredicted RBP12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 TWIST1Q15672 202 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 SCGB1D4Q6XE38 83 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 FAM90A9PA6NNJ1 464 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 CRYGCP07315 174 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 EVI2AP22794 236 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 GATA4P43694 442 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 FHL3Q13643 280 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 PATE2Q6UY27 113 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 C7orf69Q9H7B7 122 aa12.09□□□□□ -0.47
PPFIA3-206ENST00000602655 CT83Q5H943 113 aa12.08□□□□□ -0.48
PPFIA3-206ENST00000602655 GFRA4Q9GZZ7 299 aa12.08□□□□□ -0.48
PPFIA3-206ENST00000602655 NCBP2LA6PVI3 153 aaKnown RBP12.08□□□□□ -0.48
PPFIA3-206ENST00000602655 BPESC1Q9GZL8 116 aa12.08□□□□□ -0.48
PPFIA3-206ENST00000602655 DPM2O94777 84 aa12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 ZFP2Q6ZN57 461 aa12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 TMEM14BQ9NUH8 114 aa12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 RPUSD1Q9UJJ7 312 aaKnown RBP12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 FOXA2Q9Y261 457 aaPredicted RBP12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 BRI3O95415 125 aa12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 ODF1Q14990 250 aa12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 MAPKAPK5-AS1Q8N8E1 139 aa12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 TPSG1Q9NRR2 321 aa12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 TEX15Q9BXT5 2789 aa12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 RAI1Q7Z5J4 1906 aaPredicted RBP12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 C19orf71A6NCJ1 209 aa12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 LINC01548A6NM66 108 aa12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 MEIG1Q5JSS6 88 aa12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 LYZL1Q6UWQ5 148 aa12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 FAM159AQ6UWV7 190 aa12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 MLST8Q9BVC4 326 aa12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 HIGD1BQ9P298 99 aa12.07□□□□□ -0.48
PPFIA3-206ENST00000602655 A8MWV9 139 aa12.06□□□□□ -0.48
PPFIA3-206ENST00000602655 NPYP01303 97 aa12.06□□□□□ -0.48
PPFIA3-206ENST00000602655 C3orf36Q3SXR2 165 aa12.06□□□□□ -0.48
PPFIA3-206ENST00000602655 FBXL15Q9H469 300 aa12.06□□□□□ -0.48
PPFIA3-206ENST00000602655 FABP5P3A8MUU1 101 aa12.06□□□□□ -0.48
PPFIA3-206ENST00000602655 KIR2DS2P43631 304 aa12.06□□□□□ -0.48
PPFIA3-206ENST00000602655 ATP5J2P56134 94 aa12.06□□□□□ -0.48
PPFIA3-206ENST00000602655 LYZP61626 148 aa12.06□□□□□ -0.48
PPFIA3-206ENST00000602655 PRO0461Q9UI25 63 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms