RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	FAT1	Q14517	4588 aa		7.18	□□□□□ -1.26
LSM4-205	ENST00000597776		E5RGE8	158 aa		7.17	□□□□□ -1.26
LSM4-205	ENST00000597776	OR7C2	O60412	319 aa		7.17	□□□□□ -1.26
LSM4-205	ENST00000597776	SFTA3	P0C7M3	94 aa		7.17	□□□□□ -1.26
LSM4-205	ENST00000597776	DNAH10OS	P0CZ25	163 aa		7.17	□□□□□ -1.26
LSM4-205	ENST00000597776	ERVFC1-1	P60608	527 aa		7.17	□□□□□ -1.26
LSM4-205	ENST00000597776	LYPD5	Q6UWN5	251 aa		7.17	□□□□□ -1.26
LSM4-205	ENST00000597776	MDFIC	Q9P1T7	246 aa		7.17	□□□□□ -1.26
LSM4-205	ENST00000597776	HERC1	Q15751	4861 aa		7.17	□□□□□ -1.26
LSM4-205	ENST00000597776	TRGV4	A0A0C4DH28	118 aa		7.16	□□□□□ -1.26
LSM4-205	ENST00000597776		H0YIZ8	118 aa		7.16	□□□□□ -1.26
LSM4-205	ENST00000597776	EIF3G	O75821	320 aa	Known RBP eCLIP	7.16	□□□□□ -1.26
LSM4-205	ENST00000597776	RAN	P62826	216 aa	Known RBP	7.16	□□□□□ -1.26
LSM4-205	ENST00000597776	SLA	Q13239	276 aa		7.16	□□□□□ -1.26
LSM4-205	ENST00000597776	ZNF266	Q14584	549 aa		7.16	□□□□□ -1.26
LSM4-205	ENST00000597776	MRPL23	Q16540	153 aa	Known RBP	7.16	□□□□□ -1.26
LSM4-205	ENST00000597776	MZT2B	Q6NZ67	158 aa		7.16	□□□□□ -1.26
LSM4-205	ENST00000597776	NEGR1	Q7Z3B1	354 aa		7.16	□□□□□ -1.26
LSM4-205	ENST00000597776	WFDC10B	Q8IUB3	73 aa		7.16	□□□□□ -1.26
LSM4-205	ENST00000597776	ZNF479	Q96JC4	524 aa		7.16	□□□□□ -1.26
LSM4-205	ENST00000597776	MRPL32	Q9BYC8	188 aa	Known RBP	7.16	□□□□□ -1.26
LSM4-205	ENST00000597776	WDR61	Q9GZS3	305 aa	Known RBP	7.16	□□□□□ -1.26
LSM4-205	ENST00000597776	SLC25A31	Q9H0C2	315 aa		7.16	□□□□□ -1.26
LSM4-205	ENST00000597776	PGPEP1	Q9NXJ5	209 aa		7.16	□□□□□ -1.26
LSM4-205	ENST00000597776	EPM2A	B3EWF7	344 aa		7.15	□□□□□ -1.26
LSM4-205	ENST00000597776		K7EQD1	137 aa		7.15	□□□□□ -1.26
LSM4-205	ENST00000597776	EREG	O14944	169 aa		7.15	□□□□□ -1.26
LSM4-205	ENST00000597776	GYPE	P15421	78 aa		7.15	□□□□□ -1.26
LSM4-205	ENST00000597776	CSN1S1	P47710	185 aa		7.15	□□□□□ -1.26
LSM4-205	ENST00000597776	UBE2L3	P68036	154 aa	Known RBP	7.15	□□□□□ -1.26
LSM4-205	ENST00000597776	TMEM183B	Q1AE95	376 aa		7.15	□□□□□ -1.26
LSM4-205	ENST00000597776	TMEM183A	Q8IXX5	376 aa		7.15	□□□□□ -1.26
LSM4-205	ENST00000597776	KCNIP2	Q9NS61	270 aa		7.15	□□□□□ -1.26
LSM4-205	ENST00000597776	NDUFA13	Q9P0J0	144 aa		7.15	□□□□□ -1.26
LSM4-205	ENST00000597776		A0A087WTM6	91 aa		7.14	□□□□□ -1.27
LSM4-205	ENST00000597776	TRBV7-9	A0A0J9YWB2	115 aa		7.14	□□□□□ -1.27
LSM4-205	ENST00000597776	SRI	P30626	198 aa		7.14	□□□□□ -1.27
LSM4-205	ENST00000597776	XG	P55808	180 aa		7.14	□□□□□ -1.27
LSM4-205	ENST00000597776	KRTAP10-1	P60331	282 aa		7.14	□□□□□ -1.27
LSM4-205	ENST00000597776	ASAH1	Q13510	395 aa		7.14	□□□□□ -1.27
LSM4-205	ENST00000597776	FFAR4	Q5NUL3	377 aa		7.14	□□□□□ -1.27
LSM4-205	ENST00000597776	NFE4	Q86UQ8	179 aa		7.14	□□□□□ -1.27
LSM4-205	ENST00000597776	OR10G4	Q8NGN3	311 aa		7.14	□□□□□ -1.27
LSM4-205	ENST00000597776	HYLS1	Q96M11	299 aa		7.14	□□□□□ -1.27
LSM4-205	ENST00000597776	NMES1	Q9C002	83 aa		7.14	□□□□□ -1.27
LSM4-205	ENST00000597776	PTTG2	Q9NZH5	202 aa		7.14	□□□□□ -1.27
LSM4-205	ENST00000597776	NAGK	Q9UJ70	344 aa		7.14	□□□□□ -1.27
LSM4-205	ENST00000597776	LY96	Q9Y6Y9	160 aa		7.14	□□□□□ -1.27
LSM4-205	ENST00000597776	TRAV9-2	A0A087WT02	112 aa		7.13	□□□□□ -1.27
LSM4-205	ENST00000597776	LOC100131303	A0A0U1RQF7	123 aa		7.13	□□□□□ -1.27
LSM4-205	ENST00000597776	RBAKDN	A6NC62	111 aa		7.13	□□□□□ -1.27
LSM4-205	ENST00000597776	DIRC3	C9JPN6	131 aa		7.13	□□□□□ -1.27
LSM4-205	ENST00000597776	C17orf112	F2Z3M2	114 aa		7.13	□□□□□ -1.27
LSM4-205	ENST00000597776		Q6AWC8	147 aa		7.13	□□□□□ -1.27
LSM4-205	ENST00000597776	CDPF1	Q6NVV7	123 aa		7.13	□□□□□ -1.27
LSM4-205	ENST00000597776	FAM159A	Q6UWV7	190 aa		7.13	□□□□□ -1.27
LSM4-205	ENST00000597776	IQCF2	Q8IXL9	164 aa		7.13	□□□□□ -1.27
LSM4-205	ENST00000597776	ENKUR	Q8TC29	256 aa		7.13	□□□□□ -1.27
LSM4-205	ENST00000597776	PCNP	Q8WW12	178 aa	Known RBP	7.13	□□□□□ -1.27
LSM4-205	ENST00000597776	ATP5S	Q99766	215 aa		7.13	□□□□□ -1.27
LSM4-205	ENST00000597776	MSRB1	Q9NZV6	116 aa		7.13	□□□□□ -1.27
LSM4-205	ENST00000597776	RPH3AL	Q9UNE2	315 aa		7.13	□□□□□ -1.27
LSM4-205	ENST00000597776	TRGV11	A0A075B6L2	103 aa		7.12	□□□□□ -1.27
LSM4-205	ENST00000597776	H2BFS	P57053	126 aa		7.12	□□□□□ -1.27
LSM4-205	ENST00000597776	KHDC3L	Q587J8	217 aa		7.12	□□□□□ -1.27
LSM4-205	ENST00000597776	LYPD1	Q8N2G4	141 aa		7.12	□□□□□ -1.27
LSM4-205	ENST00000597776	PPP1R1C	Q8WVI7	109 aa		7.12	□□□□□ -1.27
LSM4-205	ENST00000597776	RASL10A	Q92737	203 aa		7.12	□□□□□ -1.27
LSM4-205	ENST00000597776	SPX	Q9BT56	116 aa		7.12	□□□□□ -1.27
LSM4-205	ENST00000597776	SMIM3	Q9BZL3	60 aa		7.12	□□□□□ -1.27
LSM4-205	ENST00000597776	TRAV4	A0A0B4J268	109 aa		7.11	□□□□□ -1.27
LSM4-205	ENST00000597776		C9JCJ5	164 aa		7.11	□□□□□ -1.27
LSM4-205	ENST00000597776		F6UZH7	168 aa		7.11	□□□□□ -1.27
LSM4-205	ENST00000597776	GNRH2	O43555	120 aa		7.11	□□□□□ -1.27
LSM4-205	ENST00000597776	ORM1	P02763	201 aa		7.11	□□□□□ -1.27
LSM4-205	ENST00000597776	EVI2A	P22794	236 aa		7.11	□□□□□ -1.27
LSM4-205	ENST00000597776	HAMP	P81172	84 aa		7.11	□□□□□ -1.27
LSM4-205	ENST00000597776	OTOR	Q9NRC9	128 aa		7.11	□□□□□ -1.27
LSM4-205	ENST00000597776	HSPB11	Q9Y547	144 aa		7.11	□□□□□ -1.27
LSM4-205	ENST00000597776	LENEP	Q9Y5L5	61 aa		7.11	□□□□□ -1.27
LSM4-205	ENST00000597776	VPS13B	Q7Z7G8	4022 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	TRAV8-1	A0A0A6YYK1	113 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	IGHV3-16	A0A0C4DH30	117 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	PGP	A6NDG6	321 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776		M0R2P5	195 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	UPK1B	O75841	260 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	IFNA5	P01569	189 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	CRYGD	P07320	174 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	INAFM2	P0DMQ5	153 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	TAS2R45	P59539	299 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	CYCS	P99999	105 aa	Known RBP	7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	IFITM3	Q01628	133 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	TDRG1	Q3Y452	100 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776		Q5VSD8	79 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	GOLT1A	Q6ZVE7	132 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	OR4C5	Q8NGB2	326 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	SCGB1C1	Q8TD33	95 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	S100Z	Q8WXG8	99 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	TVP23C	Q96ET8	276 aa		7.1	□□□□□ -1.27
LSM4-205	ENST00000597776	TXNDC17	Q9BRA2	123 aa		7.1	□□□□□ -1.27

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