RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CHAC1Q9BUX1 264 aa12.02□□□□□ -0.49
PNKP-204ENST00000594661 KLF12Q9Y4X4 402 aa12.02□□□□□ -0.49
PNKP-204ENST00000594661 CSMD2Q7Z408 3487 aa12.02□□□□□ -0.49
PNKP-204ENST00000594661 SPG11Q96JI7 2443 aa12.01□□□□□ -0.49
PNKP-204ENST00000594661 NPBQ8NG41 125 aa12.01□□□□□ -0.49
PNKP-204ENST00000594661 AJUBAQ96IF1 538 aa12.01□□□□□ -0.49
PNKP-204ENST00000594661 NHP2Q9NX24 153 aaKnown RBP12.01□□□□□ -0.49
PNKP-204ENST00000594661 FBN2P35556 2912 aa12.01□□□□□ -0.49
PNKP-204ENST00000594661 LRRK2Q5S007 2527 aa12.01□□□□□ -0.49
PNKP-204ENST00000594661 IGHV4-30-2A0A087WSY4 118 aa12.01□□□□□ -0.49
PNKP-204ENST00000594661 NDUFA3O95167 84 aa12.01□□□□□ -0.49
PNKP-204ENST00000594661 UBE2E1P51965 193 aa12.01□□□□□ -0.49
PNKP-204ENST00000594661 FHL3Q13643 280 aa12.01□□□□□ -0.49
PNKP-204ENST00000594661 CEND1Q8N111 149 aa12.01□□□□□ -0.49
PNKP-204ENST00000594661 A0A1B0GWB2 263 aa12□□□□□ -0.49
PNKP-204ENST00000594661 OOSP1A8MZH6 123 aa12□□□□□ -0.49
PNKP-204ENST00000594661 CNIH1O95406 144 aa12□□□□□ -0.49
PNKP-204ENST00000594661 P01737 135 aa12□□□□□ -0.49
PNKP-204ENST00000594661 PYYP10082 97 aa12□□□□□ -0.49
PNKP-204ENST00000594661 MYCNOSP40205 109 aa12□□□□□ -0.49
PNKP-204ENST00000594661 LINC00322Q6ZN03 302 aaPredicted RBP12□□□□□ -0.49
PNKP-204ENST00000594661 UFC1Q9Y3C8 167 aa12□□□□□ -0.49
PNKP-204ENST00000594661 FAM208BQ5VWN6 2430 aa12□□□□□ -0.49
PNKP-204ENST00000594661 CLEC3BP05452 202 aa11.99□□□□□ -0.49
PNKP-204ENST00000594661 COX6B1P14854 86 aa11.99□□□□□ -0.49
PNKP-204ENST00000594661 ORM2P19652 201 aa11.99□□□□□ -0.49
PNKP-204ENST00000594661 LINC00305Q7Z4B0 112 aa11.99□□□□□ -0.49
PNKP-204ENST00000594661 PRSS3P2Q8NHM4 247 aa11.99□□□□□ -0.49
PNKP-204ENST00000594661 TRGV9Q99603 122 aa11.99□□□□□ -0.49
PNKP-204ENST00000594661 PAXXQ9BUH6 204 aa11.99□□□□□ -0.49
PNKP-204ENST00000594661 HIF1ANQ9NWT6 349 aa11.99□□□□□ -0.49
PNKP-204ENST00000594661 SAA4P35542 130 aa11.99□□□□□ -0.49
PNKP-204ENST00000594661 TCTAP57738 103 aa11.99□□□□□ -0.49
PNKP-204ENST00000594661 Q6AWC8 147 aa11.99□□□□□ -0.49
PNKP-204ENST00000594661 Q8N6K4 173 aa11.99□□□□□ -0.49
PNKP-204ENST00000594661 ZNF414Q96IQ9 312 aa11.99□□□□□ -0.49
PNKP-204ENST00000594661 J3KRW8 73 aa11.98□□□□□ -0.49
PNKP-204ENST00000594661 NHLRC4P0CG21 123 aaPredicted RBP11.98□□□□□ -0.49
PNKP-204ENST00000594661 VCX2Q9H322 139 aa11.98□□□□□ -0.49
PNKP-204ENST00000594661 ZFHX3Q15911 3703 aa11.98□□□□□ -0.49
PNKP-204ENST00000594661 LTAP01374 205 aa11.97□□□□□ -0.49
PNKP-204ENST00000594661 PAX8Q06710 450 aa11.97□□□□□ -0.49
PNKP-204ENST00000594661 EBI3Q14213 229 aa11.97□□□□□ -0.49
PNKP-204ENST00000594661 RRN3P1Q2M238 152 aa11.97□□□□□ -0.49
PNKP-204ENST00000594661 AMTNQ6UX39 209 aa11.97□□□□□ -0.49
PNKP-204ENST00000594661 SMIM20Q8N5G0 67 aa11.97□□□□□ -0.49
PNKP-204ENST00000594661 PRELID3AQ96N28 172 aa11.97□□□□□ -0.49
PNKP-204ENST00000594661 EPDR1Q9UM22 224 aa11.97□□□□□ -0.49
PNKP-204ENST00000594661 CELSR1Q9NYQ6 3014 aa11.97□□□□□ -0.49
PNKP-204ENST00000594661 MAP1AP78559 2803 aaPredicted RBP11.97□□□□□ -0.49
PNKP-204ENST00000594661 CENPVL3A0A0U1RRI6 287 aa11.96□□□□□ -0.49
PNKP-204ENST00000594661 HLA-DRB4P13762 266 aa11.96□□□□□ -0.49
PNKP-204ENST00000594661 TAL2Q16559 108 aa11.96□□□□□ -0.49
PNKP-204ENST00000594661 ZFAND6Q6FIF0 208 aa11.96□□□□□ -0.49
PNKP-204ENST00000594661 HLA-DRB4X5D2U9 266 aa11.96□□□□□ -0.49
PNKP-204ENST00000594661 A0A1B0GW15 77 aa11.96□□□□□ -0.5
PNKP-204ENST00000594661 NCBP2LA6PVI3 153 aaKnown RBP11.96□□□□□ -0.5
PNKP-204ENST00000594661 NPFFO15130 113 aa11.96□□□□□ -0.5
PNKP-204ENST00000594661 FAM106CPP0CH98 169 aa11.96□□□□□ -0.5
PNKP-204ENST00000594661 GNG5P63218 68 aa11.96□□□□□ -0.5
PNKP-204ENST00000594661 LOXL1Q08397 574 aaPredicted RBP11.96□□□□□ -0.5
PNKP-204ENST00000594661 C12orf74Q32Q52 190 aa11.96□□□□□ -0.5
PNKP-204ENST00000594661 FAM106AQ4KMX7 169 aa11.96□□□□□ -0.5
PNKP-204ENST00000594661 FXYD5Q96DB9 178 aa11.96□□□□□ -0.5
PNKP-204ENST00000594661 SRSF8Q9BRL6 282 aaKnown RBP11.96□□□□□ -0.5
PNKP-204ENST00000594661 TRBV25-1A0A075B6N4 114 aa11.95□□□□□ -0.5
PNKP-204ENST00000594661 IGHV3OR16-10A0A075B7F0 116 aa11.95□□□□□ -0.5
PNKP-204ENST00000594661 IFI27P40305 119 aaPredicted RBP11.95□□□□□ -0.5
PNKP-204ENST00000594661 CFAP126Q5VTH2 177 aa11.95□□□□□ -0.5
PNKP-204ENST00000594661 ZNF562Q6V9R5 426 aa11.95□□□□□ -0.5
PNKP-204ENST00000594661 NFE4Q86UQ8 179 aa11.95□□□□□ -0.5
PNKP-204ENST00000594661 NPIPB5A8MRT5 1133 aa11.95□□□□□ -0.5
PNKP-204ENST00000594661 I3L2K1 104 aa11.95□□□□□ -0.5
PNKP-204ENST00000594661 NDPQ00604 133 aa11.95□□□□□ -0.5
PNKP-204ENST00000594661 IFI27L1Q96BM0 104 aa11.95□□□□□ -0.5
PNKP-204ENST00000594661 ABCA1O95477 2261 aa11.94□□□□□ -0.5
PNKP-204ENST00000594661 IGKV2D-26A0A0A0MRZ7 120 aa11.94□□□□□ -0.5
PNKP-204ENST00000594661 PRSS29PA6NIE9 313 aa11.94□□□□□ -0.5
PNKP-204ENST00000594661 HBDP02042 147 aa11.94□□□□□ -0.5
PNKP-204ENST00000594661 COL8A1P27658 744 aa11.94□□□□□ -0.5
PNKP-204ENST00000594661 SMCPP49901 116 aaPredicted RBP11.94□□□□□ -0.5
PNKP-204ENST00000594661 FMC1Q96HJ9 113 aa11.94□□□□□ -0.5
PNKP-204ENST00000594661 CITED1Q99966 193 aa11.94□□□□□ -0.5
PNKP-204ENST00000594661 ZMAT4Q9H898 229 aa11.94□□□□□ -0.5
PNKP-204ENST00000594661 A0A1B0GUT8 65 aa11.93□□□□□ -0.5
PNKP-204ENST00000594661 ODF1Q14990 250 aa11.93□□□□□ -0.5
PNKP-204ENST00000594661 DAZAP1Q96EP5 407 aaKnown RBP11.93□□□□□ -0.5
PNKP-204ENST00000594661 IGHG4P01861 327 aa11.93□□□□□ -0.5
PNKP-204ENST00000594661 RIGQ13278 110 aa11.93□□□□□ -0.5
PNKP-204ENST00000594661 TEX29Q8N6K0 151 aa11.93□□□□□ -0.5
PNKP-204ENST00000594661 RASL11BQ9BPW5 248 aa11.93□□□□□ -0.5
PNKP-204ENST00000594661 SRD5A1P18405 259 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 PPIFP30405 207 aaKnown RBP11.92□□□□□ -0.5
PNKP-204ENST00000594661 ARL3P36405 182 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 LYZP61626 148 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 Q8N9W7 124 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 DKK2Q9UBU2 259 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 HHLA3Q9XRX5 114 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 U3KQK5 164 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 CENPEQ02224 2701 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms